mRNA_E-fasciculatus_F_contig15171.3660.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15171.3660.1 vs. uniprot
Match: A0A6H5JK57_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK57_9PHAE) HSP 1 Score: 150 bits (380), Expect = 6.050e-42 Identity = 85/124 (68.55%), Postives = 98/124 (79.03%), Query Frame = 2
Query: 2 EPRIVRRRSKGSARIGCPFEVVVRLHAKTHPWPMITNMKLEHNQ*VSREAIEVKRRLAGQRTEEQREQVERTTGDGMKPKAMTEATQALHEESGIEINKHAAKNEAASVHGAKQPRDAADAYEE 373
EP ++RR KGSAR GC FEV VR HAK+HP P ITNMKL HN V R+A+ VK RLAG+ TEEQR QVE+ T GMKPKA+ EA QALHE+S IEIN+ A +N AASVHGA++PRDAADAYEE
Sbjct: 91 EPGVIRRNRKGSARTGCQFEVSVR-HAKSHPRPKITNMKLGHNHVVDRQAMAVKLRLAGKLTEEQRGQVEKMTSKGMKPKAVHEAIQALHEDSDIEINRRAVQNVAASVHGAEKPRDAADAYEE 213
BLAST of mRNA_E-fasciculatus_F_contig15171.3660.1 vs. uniprot
Match: A0A6H5L586_9PHAE (FAR1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L586_9PHAE) HSP 1 Score: 141 bits (356), Expect = 5.410e-40 Identity = 78/123 (63.41%), Postives = 96/123 (78.05%), Query Frame = 2
Query: 5 PRIVRRRSKGSARIGCPFEVVVRLHAKTHPWPMITNMKLEHNQ*VSREAIEVKRRLAGQRTEEQREQVERTTGDGMKPKAMTEATQALHEESGIEINKHAAKNEAASVHGAKQPRDAADAYEE 373
P + RR KGSAR GCPFEV VR HAK+H WP I+NMKL HN V R+AI+VK RLA + TEEQ QV++ T GMKPK +T+A +A+HE+S I+INK A +N AA+VHGA++PRDAADAYEE
Sbjct: 89 PGVQRRNVKGSARTGCPFEVSVR-HAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVKQMTSHGMKPKEVTKAMKAIHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEE 210
BLAST of mRNA_E-fasciculatus_F_contig15171.3660.1 vs. uniprot
Match: A0A6H5JAS6_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAS6_9PHAE) HSP 1 Score: 147 bits (371), Expect = 1.690e-39 Identity = 83/124 (66.94%), Postives = 97/124 (78.23%), Query Frame = 2
Query: 2 EPRIVRRRSKGSARIGCPFEVVVRLHAKTHPWPMITNMKLEHNQ*VSREAIEVKRRLAGQRTEEQREQVERTTGDGMKPKAMTEATQALHEESGIEINKHAAKNEAASVHGAKQPRDAADAYEE 373
EP ++RR KGSAR GC FEV VR HA +HP P ITN+KL HN V R+A+ VK RLAG+ TEEQR QVE+ T GMKPKA+ EA QALHE+S IEIN+ A +N AASVHGA++PRDAADAYEE
Sbjct: 91 EPGVIRRNRKGSARTGCQFEVSVR-HANSHPRPKITNIKLGHNHVVDRQAMAVKLRLAGKLTEEQRGQVEKMTSKGMKPKAVHEAIQALHEDSDIEINRRAVQNVAASVHGAEKPRDAADAYEE 213
BLAST of mRNA_E-fasciculatus_F_contig15171.3660.1 vs. uniprot
Match: A0A6H5JNB0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB0_9PHAE) HSP 1 Score: 146 bits (368), Expect = 2.450e-38 Identity = 85/128 (66.41%), Postives = 99/128 (77.34%), Query Frame = 2
Query: 2 EPRIVRRRSKGSARIGCPFEVVVRLHAKTHPWPMITNMKLEHNQ*VSREAIEVKRRLAGQRTEEQREQVERTTGD----GMKPKAMTEATQALHEESGIEINKHAAKNEAASVHGAKQPRDAADAYEE 373
EP ++RR KGSAR GC FEV VR HAK+HP P ITNMKL HN V R+A+ VK RLAG+ TEEQR QVE+ T + GMKPKA+ EA QALHE+S IEIN+ A +N AASVHGA++PRDAADAYEE
Sbjct: 91 EPGVIRRNRKGSARTGCQFEVSVR-HAKSHPRPKITNMKLGHNHVVDRQAMAVKLRLAGKLTEEQRGQVEKMTSEEIERGMKPKAVHEAIQALHEDSDIEINRRAVQNVAASVHGAEKPRDAADAYEE 217
BLAST of mRNA_E-fasciculatus_F_contig15171.3660.1 vs. uniprot
Match: A0A6H5KUA5_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUA5_9PHAE) HSP 1 Score: 142 bits (357), Expect = 2.330e-37 Identity = 78/123 (63.41%), Postives = 95/123 (77.24%), Query Frame = 2
Query: 5 PRIVRRRSKGSARIGCPFEVVVRLHAKTHPWPMITNMKLEHNQ*VSREAIEVKRRLAGQRTEEQREQVERTTGDGMKPKAMTEATQALHEESGIEINKHAAKNEAASVHGAKQPRDAADAYEE 373
P ++RR KGSAR GCPFEV VR HAKTH WP I+NMKL+HN V R AI+V+ RLA + TEEQ QV + T GMKPK +T+A +ALHE+ I+INK A +N AA+VHGA++PRDAADAYEE
Sbjct: 87 PGVLRRNVKGSARTGCPFEVSVR-HAKTHRWPKISNMKLKHNHSVDRNAIDVQLRLASKLTEEQLGQVNQMTSHGMKPKEVTKAMKALHEDGDIDINKRAVQNAAATVHGAEKPRDAADAYEE 208
BLAST of mRNA_E-fasciculatus_F_contig15171.3660.1 vs. uniprot
Match: A0A6H5KZF1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF1_9PHAE) HSP 1 Score: 126 bits (317), Expect = 1.540e-31 Identity = 67/99 (67.68%), Postives = 82/99 (82.83%), Query Frame = 2
Query: 77 HAKTHPWPMITNMKLEHNQ*VSREAIEVKRRLAGQRTEEQREQVERTTGDGMKPKAMTEATQALHEESGIEINKHAAKNEAASVHGAKQPRDAADAYEE 373
HA+TH WP I+NMKLEHN V+REAI+VK RLAG+ TEE+R QVE+ GMKPKA+TEA +ALHE+S ++INK A +N AASVHGA++P DAADAYEE
Sbjct: 146 HARTHQWPKISNMKLEHNHVVNREAIDVKLRLAGKLTEERRGQVEKMISKGMKPKAVTEAMKALHEDSDVDINKRAVQNAAASVHGAEKPGDAADAYEE 244
BLAST of mRNA_E-fasciculatus_F_contig15171.3660.1 vs. uniprot
Match: A0A6H5JDU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDU5_9PHAE) HSP 1 Score: 118 bits (296), Expect = 1.050e-30 Identity = 66/116 (56.90%), Postives = 85/116 (73.28%), Query Frame = 2
Query: 5 PRIVRRRSKGSARIGCPFEVVVRLHAKTHPWPMITNMKLEHNQ*VSREAIEVKRRLAGQRTEEQREQVERTTGDGMKPKAMTEATQALHEESGIEINKHAAKNEAASVHGAKQPRD 352
P ++RR KGSAR GCPFEV VR HAKTH WP I+NMKL+HN V R AI+V+ RLA + TEEQ QV++ T GMKPK +T+A +ALHE+ I+INK A +N AA+V ++ R+
Sbjct: 101 PGVLRRNVKGSARTGCPFEVSVR-HAKTHRWPKISNMKLKHNHSVDRNAIDVQVRLASKLTEEQLGQVKQMTSHGMKPKEVTKAMKALHEDGDIDINKRAVQNAAATVRTGRRSRE 215
BLAST of mRNA_E-fasciculatus_F_contig15171.3660.1 vs. uniprot
Match: A0A6H5LMZ3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMZ3_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 5.370e-13 Identity = 40/63 (63.49%), Postives = 51/63 (80.95%), Query Frame = 2
Query: 185 TEEQREQVERTTGDGMKPKAMTEATQALHEESGIEINKHAAKNEAASVHGAKQPRDAADAYEE 373
TEEQ QV++ T GMKPK +T+A +ALHE+ I+INK A +N AA+VHGAK+PRDAAD+YEE
Sbjct: 474 TEEQLGQVKQMTSHGMKPKEVTKAMKALHEDGDIDINKRAVQNAAATVHGAKKPRDAADSYEE 536 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15171.3660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15171.3660.1 >prot_E-fasciculatus_F_contig15171.3660.1 ID=prot_E-fasciculatus_F_contig15171.3660.1|Name=mRNA_E-fasciculatus_F_contig15171.3660.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=48bp MKPKAMTEATQALHEESGIEINKHAAKNEAASVHGAKQPRDAADAYEEback to top mRNA from alignment at E-fasciculatus_F_contig15171:1331..2125- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15171.3660.1 ID=mRNA_E-fasciculatus_F_contig15171.3660.1|Name=mRNA_E-fasciculatus_F_contig15171.3660.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=795bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15171:1331..2125- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15171:1331..2125- >mRNA_E-fasciculatus_F_contig15171.3660.1 ID=mRNA_E-fasciculatus_F_contig15171.3660.1|Name=mRNA_E-fasciculatus_F_contig15171.3660.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=288bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15171:1331..2125- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |