mRNA_E-fasciculatus_F_contig1517.3659.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1517.3659.1
Unique NamemRNA_E-fasciculatus_F_contig1517.3659.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1517.3659.1 vs. uniprot
Match: D7G637_ECTSI (Homocysteine S-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G637_ECTSI)

HSP 1 Score: 489 bits (1260), Expect = 1.240e-166
Identity = 287/410 (70.00%), Postives = 305/410 (74.39%), Query Frame = 1
Query:    1 RKGVGPERAKELLLLSVRLAVEARNQFWADYQEERPASRPAATKPQALQQXXXXXXXPTATAVEWAEEEENGQRAALSGPNYHEEGRRQHRRRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLEEFHAKRLEVLATADGVDMVVFETVPCLAEVRAILSLLQARGDFRPRVSAVISVSCKDDEHLRSGERVQDFADLIWRRAADQDDTEGPAAVVTTTAP----PARVVAVGVNCTSPSHAAGALRTLAAARARPDARRSAPRENPP-RIALVAYPNSGEEWDAGARDWVEGTGLR--EGGVGGGAEEFGRMARDEWFAAGARVVGGCCRTGQAHVAEVRRALASAAEEKGLQGGEEQQRSALQRSS*FPRLPSGVCSLGSLRGVIVGVREGEGQQRPAWHQESS 1209
            RKG+GPERA+ELLLLSVRLAVEAR+QFWA+YQEERPASRPA TKPQ L+Q       PTATA+E   EEEN ++     P    +GRR   RRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSL+EFHA+RLE+LA ADGVDMVVFETVPCLAEVRAILSLLQ   DFRPRVSAVISVSCKDD+HLRSGER+ DFADLIWR A +QD  EGP             PA V AVGVNCTSPSHAAG LR LAAARARPDAR  APRE PP R+ALVAYPNSGEEWDA  RDWVEGTGLR  E G GGGAEEFGRMARDEWFAAGA VVGGCCRT  AHVAE+RRALASAAEE                                      GV+EGEGQQR  WHQE S
Sbjct:   79 RKGIGPERAEELLLLSVRLAVEARDQFWAEYQEERPASRPAPTKPQTLRQPSQ----PTATAIE---EEENAKQHQQ--PVRGSDGRRH--RRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLKEFHARRLEILARADGVDMVVFETVPCLAEVRAILSLLQ---DFRPRVSAVISVSCKDDQHLRSGERLHDFADLIWRHAEEQDAAEGPXXXXXXXXXXXXRPACVAAVGVNCTSPSHAAGTLRALAAARARPDARHGAPRETPPSRVALVAYPNSGEEWDASVRDWVEGTGLRDREAGGGGGAEEFGRMARDEWFAAGATVVGGCCRTRPAHVAEIRRALASAAEE--------------------------------------GVQEGEGQQRTGWHQEPS 436          
BLAST of mRNA_E-fasciculatus_F_contig1517.3659.1 vs. uniprot
Match: A0A6H5KFQ7_9PHAE (Hcy-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ7_9PHAE)

HSP 1 Score: 481 bits (1237), Expect = 7.700e-163
Identity = 286/412 (69.42%), Postives = 303/412 (73.54%), Query Frame = 1
Query:    1 RKGVGPERAKELLLLSVRLAVEARNQFWADYQEERPASRPAATKPQALQQXXXXXXXPTATAVEWAEEEENGQR--AALSGPNYHEEGRRQHRRRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLEEFHAKRLEVLATADGVDMVVFETVPCLAEVRAILSLLQARGDFRPRVSAVISVSCKDDEHLRSGERVQDFADLIWRRAADQDDTEGPAAVVTTTAP----PARVVAVGVNCTSPSHAAGALRTLAAARARPDARRSAPRENPP-RIALVAYPNSGEEWDAGARDWVEGTGLREG--GVGGGAEEFGRMARDEWFAAGARVVGGCCRTGQAHVAEVRRALASAAEEKGLQGGEEQQRSALQRSS*FPRLPSGVCSLGSLRGVIVGVREGEGQQRPAWHQESS 1209
            RKG+GPERA+ELLLLSVRLAVEAR+QFWA+YQEERPASRPA TK Q LQQ       P+ T      EEEN ++    LSG     EGR    RRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSL+EFHA+RLE+LA ADGVDMVVFETVPCLAE            DFRP VSAVISVSCKDD+HLRS ER+QDFADLIWRRA +QD TEGP AV  TT      PA VVAVGVNCTSPSHAAGALRTLAAARARPDAR  APRE PP RIALVAYPNSGEEWDA ARDWVEGTGLREG  G GGGAEEFGRMARDEWFAAGARVVGGCCRT  AHV E+RRALASAAEE+                                      V+EGEGQ+R AWHQE S
Sbjct:  109 RKGIGPERAEELLLLSVRLAVEARDQFWAEYQEERPASRPAPTKQQTLQQ-------PSQTTATTFVEEENPKQHQQPLSGS----EGRPH--RRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLKEFHARRLEILARADGVDMVVFETVPCLAE------------DFRPSVSAVISVSCKDDQHLRSEERLQDFADLIWRRAEEQDATEGPPAVKATTTTMTTRPACVVAVGVNCTSPSHAAGALRTLAAARARPDARHGAPRETPPSRIALVAYPNSGEEWDASARDWVEGTGLREGRAGGGGGAEEFGRMARDEWFAAGARVVGGCCRTRPAHVTEIRRALASAAEER--------------------------------------VQEGEGQKRSAWHQEPS 457          
BLAST of mRNA_E-fasciculatus_F_contig1517.3659.1 vs. uniprot
Match: A0A835ZJM3_9STRA (Homocysteine S-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJM3_9STRA)

HSP 1 Score: 181 bits (459), Expect = 5.450e-48
Identity = 148/357 (41.46%), Postives = 177/357 (49.58%), Query Frame = 1
Query:    7 GVGPERAKELLLLSVRLAVEARNQFWADYQEERPASRPAATKPQALQQXXXXXXXPTATAVEWAEEEENGQRAALSGPNYHEEGRRQHRRRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLEEFHAKRLEVLATADGVDMVVFETVPCLAEVRAILSLLQARGDFRPRVSAV---ISVSCKDDEHLRSGERVQDFADLIWRRAADQDDTEGPAAVVTTTAPPARVVAVGVNCTSPSHAAGALRTLAAARARPDARRSAPRENPPRIA---------------LVAYPNSGEEWDAGARDWVEGTGLREGGVGGGAEEFGRMARDEWFAAGARVVGGCCRTGQAHVAEVRRAL 1023
            GV   RA ELL LSVR+A EAR++FW+D+Q   PA+  A+                           ++   A L             RRRRLRPLVAAS+G YGA LADGSEY+G+Y  T    L ++H  RL  LA A G D+V  ETVPCLAE RA++ LL    D     S +   ISVSC D  HL SGE + + A  +   AAD                  RV A+GVNCT+P HA  A+R L AA A       A  E  P                  ++AYPN+GE+WDA AR WVEGTG         A  FG +A   W AAGA  VGGCCR G   VA VR AL
Sbjct:   89 GVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTAS---------------------------DSCGTAPLPC-----------RRRRLRPLVAASVGSYGAFLADGSEYKGNYGMT-IEQLMDWHRPRLRALA-ATGADLVACETVPCLAEARALVLLLN-EDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAV--AAADAGG---------------RVAALGVNCTAPRHAEAAVRALRAAVA-------ALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGE--------AHRFGELAA-RWHAAGAAAVGGCCRVGPDAVAAVRAAL 371          
BLAST of mRNA_E-fasciculatus_F_contig1517.3659.1 vs. uniprot
Match: A0A540V9S1_9CHLR (Homocysteine S-methyltransferase n=1 Tax=Litorilinea aerophila TaxID=1204385 RepID=A0A540V9S1_9CHLR)

HSP 1 Score: 156 bits (394), Expect = 1.950e-39
Identity = 125/334 (37.43%), Postives = 156/334 (46.71%), Query Frame = 1
Query:    1 RKGVGPERAKELLLLSVRLAVEARNQFWADYQEERPASRPAATKPQALQQXXXXXXXPTATAVEWAEEEENGQRAALSGPNYHEEGRRQHRRRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLEEFHAKRLEVLATADGVDMVVFETVPCLAEVRAILSLLQARGDFRPRVSAVISVSCKDDEHLRSGERVQDFADLIWRRAADQDDTEGPAAVVTTTAPPARVVAVGVNCTSPSHAAGALRTLAAARARPDARRSAPRENPPRIALVAYPNSGEEWDAGARDWVEGTGLREGGVGGGAEEFGRMARDEWFAAGARVVGGCCRTGQAHV 1002
            R+G+  E+A+ELLLLSVRLA EAR+ FWAD     PA+R                                                      R+RPLVAAS+G YGA LADGSEYRGDY      +L +FH  R+ VLA A G D++  ET+PC AE  A++ LL    +F P+  A +S SC DD H+  GE    FA  +  R A + +               +V+AVG+NCT P H    LR       RP               LVAYPNSGE WDA    WV G+G          E   R     W+AAGAR++GGCCRT  A +
Sbjct:   79 RRGLSREQAEELLLLSVRLAQEARDLFWAD-----PANRQG----------------------------------------------------RIRPLVAASIGPYGAYLADGSEYRGDY-GLSVEALMDFHRPRMAVLA-ASGADLLACETIPCQAEGEALVRLL---AEF-PQAVAWLSFSCCDDLHVCHGEP---FARCV--RLASRSE---------------QVIAVGLNCTPPRHVEALLRHAVGVTDRP---------------LVAYPNSGETWDAEHHCWVAGSG----------ETDFRTPALRWYAAGARLIGGCCRTTPADI 304          
BLAST of mRNA_E-fasciculatus_F_contig1517.3659.1 vs. uniprot
Match: UPI0006195FF2 (homocysteine S-methyltransferase n=2 Tax=Paenibacillus TaxID=44249 RepID=UPI0006195FF2)

HSP 1 Score: 151 bits (381), Expect = 1.930e-37
Identity = 117/341 (34.31%), Postives = 163/341 (47.80%), Query Frame = 1
Query:    1 RKGVGPERAKELLLLSVRLAVEARNQFWADYQEERPASRPAATKPQALQQXXXXXXXPTATAVEWAEEEENGQRAALSGPNYHEEGRRQHRRRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLEEFHAKRLEVLATADGVDMVVFETVPCLAEVRAILSLLQARGDFRPRVSAVISVSCKDDEHLRSGERVQDFADLIWRRAADQDDTEGPAAVVTTTAPPARVVAVGVNCTSPSHAAGALRTLAAARARPDARRSAPRENPPRIALVAYPNSGEEWDAGARDWVEGTGLREGGVGGGAEEFGRMARDEWFAAGARVVGGCCRTGQAHVAEVRRAL 1023
            ++G   + AKEL+  SV++A+EAR+ FW DY      +  A   P  L                     +N    A S P               RPLVAAS+G YGA LADGSEYRGDY       L EFHA R+  L  A G D++  ET+PCL E +AI+++LQ    F P V A  S S KD+EH+ SGER  D     W  + +Q                  V A+G+NCT+  +    + T+ A   +P               ++ YPNS E++D   + W  G+           +++G+ A+D W+A GAR++GGCCRT  A +A VR+ L
Sbjct:   77 QRGWSEQEAKELIRRSVQIAIEARDTFWTDYTNSENNNFAAQKFPNQL---------------------DNESARATSRP---------------RPLVAASVGPYGAYLADGSEYRGDY-KLNEQQLVEFHAPRIRELIEA-GADILACETIPCLIEAKAIVTVLQ---QF-PGVQAWFSFSGKDNEHISSGERAADCT--AWLDSYEQ------------------VAAIGINCTALEYIPALISTMHAQTTKP---------------ILVYPNSSEQYDPATKTW-HGSSC--------TQDYGQQAQD-WYARGARLIGGCCRTTPADIASVRQVL 330          
BLAST of mRNA_E-fasciculatus_F_contig1517.3659.1 vs. uniprot
Match: A0A7C6ZX44_9CHLR (Homocysteine S-methyltransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C6ZX44_9CHLR)

HSP 1 Score: 150 bits (379), Expect = 2.290e-37
Identity = 104/252 (41.27%), Postives = 134/252 (53.17%), Query Frame = 1
Query:  274 RRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLEEFHAKRLEVLATADGVDMVVFETVPCLAEVRAILSLLQARGDFRPRVSAVISVSCKDDEHLRSGERVQDFADLIWRRAADQDDTEGPAAVVTTTAPPARVVAVGVNCTSPSHAAGALRTLAAARARPDARRSAPRENPPRIALVAYPNSGEEWDAGARDWVEGTGLREGGVGGGAEEFGRMARDEWFAAGARVVGGCCRTGQAHVAEVRRALAS 1029
            RR  RPL+AAS+G YGA LADGSEYRGDY      +L ++H  R+  LA  +  D+   ET+PCLAE  A++ LL+   +F P + A +S SC+D   L SGE + D A     R AD  D               ++VAVGVNCT P +    L        +P               L+ YPNSGE WDA AR WVEGTG+ +         F   AR  W+AAGAR++GGCCRT  A +A +  +L S
Sbjct:  112 RRLRRPLIAASIGPYGAYLADGSEYRGDY-GLSVEALMDWHRPRMAALAQTEA-DLFACETIPCLAEAEALVRLLR---EF-PYMPAWLSFSCRDGATLSSGESMADAA-----RLADASD---------------QIVAVGVNCTPPRYIETLLSEARCVTTKP---------------LLCYPNSGERWDATARCWVEGTGVAD---------FAEPAR-RWYAAGARLIGGCCRTTPADIAAIAHSLRS 312          
BLAST of mRNA_E-fasciculatus_F_contig1517.3659.1 vs. uniprot
Match: I0HNA3_RUBGI (Homocysteine S-methyltransferase MmuM n=10 Tax=Rubrivivax TaxID=28067 RepID=I0HNA3_RUBGI)

HSP 1 Score: 149 bits (377), Expect = 4.070e-37
Identity = 128/341 (37.54%), Postives = 160/341 (46.92%), Query Frame = 1
Query:    1 RKGVGPERAKELLLLSVRLAVEARNQFWADYQEERPASRPAATKPQALQQXXXXXXXPTATAVEWAEEEENGQRAALSGPNYHEEGRRQHRRRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLEEFHAKRLEVLATADGVDMVVFETVPCLAEVRAILSLLQARGDFRPRVSAVISVSCKDDEHLRSGERVQDFADLIWRRAADQDDTEGPAAVVTTTAPPARVVAVGVNCTSPSHAAGALRTLAAARARPDARRSAPRENPPRIALVAYPNSGEEWDAGARDWVEGTGLREGGVGGGAEEFGRMARDEWFAAGARVVGGCCRTGQAHVAEVRRAL 1023
            R+G   + A  L+  SV LA+EAR+ FWA+     PA+R                                              GRR       RPLVAAS+G YGA+LADGSEYRG Y       L  FH  RL+VLA A G D++  ET+PCL E  AI SLL      +P + A IS SC+D EH+  GER   FAD     AA  D   G             V AVG+NCT+P H       +AAA+AR             R+ +V YPNSGE+WDA A+ W    G R+      A +F   A+  W   GAR++GGCCRTG   +  +R AL
Sbjct:   75 RRGFSHDEAGALMRRSVALAIEARDAFWAE-----PANRA---------------------------------------------GRR-------RPLVAASVGPYGAMLADGSEYRG-YPGVTREQLAAFHRPRLQVLAAA-GADLLACETIPCLDEALAIASLLPG---LQPALPAWISFSCRDGEHVSQGER---FADC----AAALDGLPG-------------VAAVGLNCTAPEHVPA---LVAAAQART------------RLPIVVYPNSGEQWDAVAKCWH---GERD------AADFAAQAQ-RWRRGGARLIGGCCRTGPDEIRALRAAL 308          
BLAST of mRNA_E-fasciculatus_F_contig1517.3659.1 vs. uniprot
Match: A0A3A0A3P9_9CHLR (Homocysteine S-methyltransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3A0A3P9_9CHLR)

HSP 1 Score: 148 bits (374), Expect = 1.760e-36
Identity = 123/330 (37.27%), Postives = 156/330 (47.27%), Query Frame = 1
Query:    1 RKGVGPERAKELLLLSVRLAVEARNQFWADYQEERPASRPAATKPQALQQXXXXXXXPTATAVEWAEEEENGQRAALSGPNYHEEGRRQHRRRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLEEFHAKRLEVLATADGVDMVVFETVPCLAEVRAILSLLQARGDFRPRVSAVISVSCKDDEHLRSGERVQDFADLIWRRAADQDDTEGPAAVVTTTAPPARVVAVGVNCTSPSHAAGALRTLAAARARPDARRSAPRENPPRIALVAYPNSGEEWDAGARDWVEGTGLREGGVGGGAEEFGRMARDEWFAAGARVVGGCCRTG 990
            R+G+  E+A +L+ LSVRLA EAR Q   D++ E  A                                     A L+  N H      H       LVA S+G YGA LADGSEYRGDY       L +FH  RL VLA + G D++  ET+PCLAE  A++ LL    +F P   A +S SC D+ H   GER   FAD +    A  +++E             ++VAVG+NCT P +    LR+ A    +P               L+AYPNSGEEWDA    WV G G  +         F   AR  WFAAGAR++GGCCRTG
Sbjct:   78 RRGLSHEQAADLMRLSVRLACEAREQIIRDWRSETGA-------------------------------------ATLN--NRHSSPFTHHSL-----LVAVSIGPYGAYLADGSEYRGDY-GLSVEELMDFHRPRLAVLAES-GADLLACETIPCLAEGEALVRLL---AEF-PDTPAWLSFSCCDETHTCHGER---FADCV----ALANESE-------------QIVAVGLNCTPPRYVEALLRSAARVTDKP---------------LLAYPNSGEEWDAANHCWVAGAGTTD---------FAEPAR-RWFAAGARLIGGCCRTG 312          
BLAST of mRNA_E-fasciculatus_F_contig1517.3659.1 vs. uniprot
Match: UPI001905A767 (homocysteine S-methyltransferase n=2 Tax=Rubrivivax gelatinosus TaxID=28068 RepID=UPI001905A767)

HSP 1 Score: 147 bits (371), Expect = 3.040e-36
Identity = 126/344 (36.63%), Postives = 160/344 (46.51%), Query Frame = 1
Query:    1 RKGVGPERAKELLLLSVRLAVEARNQFWADYQEERPASRPAATKPQALQQXXXXXXXPTATAVEWAEEEENGQRAALSGPNYHEEGRRQHRRRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLEEFHAKRLEVLATADGVDMVVFETVPCLAEVRAILSLLQARGDFRPRVSAVISVSCKDDEHLRSGERVQDFADLIWRRAADQDDTEGPAAVVTTTAPPARVVAVGVNCTSPSHAAGALRTLAAARARPDARRSAPRENPPRIALVAYPNSGEEWDAGARDWVEGTGLREGGVGGGAEEFGRMARDEWFAAGARVVGGCCRTGQAHVAEVRRALASA 1032
            R+G+G + A  L+ LSV+LA EAR+ FWA+     PA+R                                                      R RPLVAAS+G YGA+LADGSEYRG Y       L  FH  RLEVLA A G D++  ET+P L E  AI SLL A       + A IS SC+D EH+  GER   FAD +    A  D   G             V AVG+NCT+P H       +AAA+A              R+ +V YPNSGE+WD  A+ W    G+R+      AE+F   A   W   GAR++GGCCRTG   +  +R A+ +A
Sbjct:   78 RRGIGFDEAAALMRLSVQLAAEARDAFWAE-----PANRIG----------------------------------------------------RHRPLVAASVGPYGAMLADGSEYRG-YPGVTRAQLAAFHRPRLEVLA-ASGADLLACETLPGLDEALAIASLLPALA-----LPAWISFSCRDGEHVSQGER---FADCV----AALDGLPG-------------VAAVGLNCTAPQHVPA---LVAAAQAHT------------RLPIVVYPNSGEQWDGVAKCWH---GVRD------AEDFAAQAL-RWQRGGARLIGGCCRTGPGEIRALRAAVLAA 312          
BLAST of mRNA_E-fasciculatus_F_contig1517.3659.1 vs. uniprot
Match: A0A291HRJ6_9GAMM (Homocysteine methyltransferase n=5 Tax=Zobellella TaxID=347533 RepID=A0A291HRJ6_9GAMM)

HSP 1 Score: 147 bits (371), Expect = 3.340e-36
Identity = 106/257 (41.25%), Postives = 137/257 (53.31%), Query Frame = 1
Query:  265 QHRRRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPAGSLEEFHAKRLEVLATADGVDMVVFETVPCLAEVRAILSLLQARGDFRPRVSAVISVSCKDDEHLRSGERVQDFADLIWRRAADQDDTEGPAAVVTTTAPPARVVAVGVNCTSPSHAAGALRTLAAARARPDARRSAPRENPPRIALVAYPNSGEEWDAGARDWVEGTGLREGGVGGGAEEFGRMARDEWFAAGARVVGGCCRTGQAHVAEVRRALASAA 1035
            + R  R RPLVAAS+G YGA+LADGSEYRG Y    AG L  FH  RLEVL  A G D++  ET+PCL+E RA+  L++A     P     IS SC+D EH   GER++D                     VT  AP   VVA+G+NCT+P H  G L+++  A A+P               L+ YPNSGE++DAG + W    G  +      +E+F  +A   W   GA ++GGCCRT  A +A V   L  AA
Sbjct:  111 EQRALRPRPLVAASVGPYGAMLADGSEYRGHYELDEAG-LMAFHRPRLEVLLAA-GADLLACETLPCLSEARALARLMEAH----PGACGWISFSCRDGEHNSQGERLRDC--------------------VTALAPFDSVVALGLNCTAPEHVPGLLQSVRGATAKP---------------LLVYPNSGEQYDAGHKCWH---GPAD------SEQF-ALAAGRWQREGAALIGGCCRTSPADIAAVAALLRPAA 316          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1517.3659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G637_ECTSI1.240e-16670.00Homocysteine S-methyltransferase n=1 Tax=Ectocarpu... [more]
A0A6H5KFQ7_9PHAE7.700e-16369.42Hcy-binding domain-containing protein n=1 Tax=Ecto... [more]
A0A835ZJM3_9STRA5.450e-4841.46Homocysteine S-methyltransferase n=1 Tax=Tribonema... [more]
A0A540V9S1_9CHLR1.950e-3937.43Homocysteine S-methyltransferase n=1 Tax=Litorilin... [more]
UPI0006195FF21.930e-3734.31homocysteine S-methyltransferase n=2 Tax=Paenibaci... [more]
A0A7C6ZX44_9CHLR2.290e-3741.27Homocysteine S-methyltransferase n=1 Tax=Chlorofle... [more]
I0HNA3_RUBGI4.070e-3737.54Homocysteine S-methyltransferase MmuM n=10 Tax=Rub... [more]
A0A3A0A3P9_9CHLR1.760e-3637.27Homocysteine S-methyltransferase n=1 Tax=Chlorofle... [more]
UPI001905A7673.040e-3636.63homocysteine S-methyltransferase n=2 Tax=Rubriviva... [more]
A0A291HRJ6_9GAMM3.340e-3641.25Homocysteine methyltransferase n=5 Tax=Zobellella ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1517contigE-fasciculatus_F_contig1517:14538..17388 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score303.5
Seed ortholog evalue7.9e-80
Seed eggNOG ortholog2880.D7G637
Preferred nameHMT3
KEGG rclassRC00003,RC00035,RC00496
KEGG koko:K00544,ko:K00547,ko:K17759
KEGG ReactionR00650,R02821
KEGG Pathwayko00260,ko00270,ko01100,ko01110,map00260,map00270,map01100,map01110
GOsGO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008652,GO:0008757,GO:0008898,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0032259,GO:0033477,GO:0033528,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
EggNOG free text desc.betaine-homocysteine S-methyltransferase activity
EggNOG OGsCOG0646@1,KOG1579@2759
EC2.1.1.10,2.1.1.5,5.1.99.6
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHomocysteine S-methyltransferase
Ec32 orthologEc-11_005000.1
Exons3
Model size1721
Cds size660
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1517.3659.1prot_E-fasciculatus_F_contig1517.3659.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1517 15161..16950 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927996.7662284-UTR-E-fasciculatus_F_contig1517:14537..151601622927996.7662284-UTR-E-fasciculatus_F_contig1517:14537..15160Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1517 14538..15160 -
1695995782.621625-UTR-E-fasciculatus_F_contig1517:14537..151601695995782.621625-UTR-E-fasciculatus_F_contig1517:14537..15160Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1517 14538..15160 -
1622927996.9009848-UTR-E-fasciculatus_F_contig1517:16950..173881622927996.9009848-UTR-E-fasciculatus_F_contig1517:16950..17388Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1517 16951..17388 -
1695995782.6691334-UTR-E-fasciculatus_F_contig1517:16950..173881695995782.6691334-UTR-E-fasciculatus_F_contig1517:16950..17388Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1517 16951..17388 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927996.860787-CDS-E-fasciculatus_F_contig1517:15160..156831622927996.860787-CDS-E-fasciculatus_F_contig1517:15160..15683Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1517 15161..15683 -
1695995782.6350353-CDS-E-fasciculatus_F_contig1517:15160..156831695995782.6350353-CDS-E-fasciculatus_F_contig1517:15160..15683Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1517 15161..15683 -
1622927996.8726065-CDS-E-fasciculatus_F_contig1517:16440..165051622927996.8726065-CDS-E-fasciculatus_F_contig1517:16440..16505Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1517 16441..16505 -
1695995782.6465936-CDS-E-fasciculatus_F_contig1517:16440..165051695995782.6465936-CDS-E-fasciculatus_F_contig1517:16440..16505Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1517 16441..16505 -
1622927996.8871179-CDS-E-fasciculatus_F_contig1517:16878..169501622927996.8871179-CDS-E-fasciculatus_F_contig1517:16878..16950Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1517 16879..16950 -
1695995782.6566544-CDS-E-fasciculatus_F_contig1517:16878..169501695995782.6566544-CDS-E-fasciculatus_F_contig1517:16878..16950Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1517 16879..16950 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1517.3659.1

>prot_E-fasciculatus_F_contig1517.3659.1 ID=prot_E-fasciculatus_F_contig1517.3659.1|Name=mRNA_E-fasciculatus_F_contig1517.3659.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=220bp
MVVFETVPCLAEVRAILSLLQARGDFRPRVSAVISVSCKDDEHLRSGERV
QDFADLIWRRAADQDDTEGPAAVVTTTAPPARVVAVGVNCTSPSHAAGAL
RTLAAARARPDARRSAPRENPPRIALVAYPNSGEEWDAGARDWVEGTGLR
EGGVGGGAEEFGRMARDEWFAAGARVVGGCCRTGQAHVAEVRRALASAAE
EKGLQGGEEQQRSALQRSS*
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mRNA from alignment at E-fasciculatus_F_contig1517:14538..17388-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1517.3659.1 ID=mRNA_E-fasciculatus_F_contig1517.3659.1|Name=mRNA_E-fasciculatus_F_contig1517.3659.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2851bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1517:14538..17388- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CGTAAGGGAGTAGGTCCAGAGCGGGCGAAGGAGCTCCTCCTCTTGAGCGT AAGGCTGGCGGTCGAGGCGCGAAACCAGTTCTGGGCCGATTACCAAGAAG AGCGCCCTGCATCTCGTCCTGCCGCAACGAAGCCGCAAGCCTTGCAACAA CAACAACAACAGCCATCACAACCAACCGCGACGGCTGTAGAATGGGCGGA AGAAGAAGAGAATGGCCAACGGGCTGCTCTCAGCGGGCCCAACTACCACG AGGAGGGACGACGACAGCACCGCCGCCGACGACTGCGCCCGCTTGTCGCC GCCAGCCTTGGGTGCTACGGAGCGGTTCTCGCCGACGGCTCGGAGTACAG AGGGGACTACGTCGACACGCCGGCGGGAAGCCTGGAGGAGTTCCACGCCA AGAGGCTGGAAGTCCTGGCGACGGCGGACGGTGTCGACATGGTCGTGTTC GAGACGGTCCCTTGCCTTGCGGAAGTGCGCGCCATCCTCTCATTGTTGCA GGCGAGAGGGGTTGGGGGAGGCAAAGAGAGAGAGAGAGAGAGAGAGACAG AGATAGAGAGAGAGAGAAGGAGGGTATCGAGTTTTGGCCACAATCGCGCC CATGAAGGTTGCCCGCGTGTATCTGTGACCGGTCACACAGAAGGTCAAGA AGAGACAGAGCAGTCAACCAATTTATCTGGATCCTGCCGGCATCTATCAG CAACAACAACGACATCACCTATTTAGTCACGCTTGTCTTTAGCCCCCAGA ATGCTCCGGTGTACTGTCAACCAGCACATCGGTGACGTCTGCGATATTGG TGGCACCTAGTCAGGATAACAGTTTCCCTTTTCCCTCGCGGGGACCCCTC CTTCTCTTGGGTTTCCGGCTGAATCTGTAACAGGACTTCCGCCCAAGAGT CAGCGCGGTGATCAGCGTGTCGTGTAAAGACGACGAGCACTTGAGAAGGT ACACAATCGCGGCAGGAGGGGCGTTGCTGCTGTCTTATTTGTTAGGTAGG GTGTTTCCTCCTACAGCTATCCCGACAGTTCGGTATCGATCGCGCCCTAA CCTTCCCGGGACTGGTCGTATTCACCTGCTCCACGCACGTGCTGGCGGGG GTGATCGACACCCCTTCCACAGGTTGCGCGCTTCACACGAAGCCACCATC AACCTCCGCTATCGGCAATCACAGCCAACAGCACCAAGGCTGAGGCGGCG TGGGCGTTCCTCGCGAGGATGAGGTTCTGCTGAAAGTGTGGCGTCGTATG GTAGATGGTTTTGAGTGTTGTCGCAGTGCTATTTGGTCCGATGAAGACCT CTGAGGAGTAATCGATGTTGCTTTCTCCCTAGACTCCGCCAACACTTACA CTTCGCACCATGTTTGTTCACTAAACCAGTACCGGATATCATGGCAACCC CCCTGGACCGTGCTTAACGCCCCACGGCCAAGCAGAGGTTGCGAAAACAG ACCGATACGTCTACGGAACCCTCTCGACGAGATCTTTCCGCTGCCACCCT TTTCGGTAGTGTGTCGCACTCAGGCTCTTGGGCTGCATAGAGTTACCAAG CAGTGAGGTCGGTCTAGGGTGTCGTGTGCGATAACCCCTCGTATGACACA GCAGTCAGTTGCTTTTTTGCACGCCGATGAAACAGAATAAAACAATTCGT CCGGTGTACGTACCTTCTTCGAACCGTGACGACGACCGTTCGGCCGGACC TTCAGCGGAGAGCGCGTCCAAGACTTCGCCGACCTCATCTGGCGGCGAGC CGCAGACCAAGATGACACCGAGGGACCAGCAGCGGTAGTGACGACGACGG CCCCGCCGGCGCGCGTCGTTGCCGTCGGGGTGAACTGCACATCGCCAAGC CACGCCGCGGGGGCCCTTCGGACGCTAGCGGCGGCGAGGGCGAGGCCGGA TGCGCGTCGCAGCGCGCCTCGGGAAAACCCGCCCCGGATCGCGCTTGTGG CGTACCCCAACAGCGGGGAAGAGTGGGACGCCGGCGCCAGGGACTGGGTG GAAGGGACAGGATTGCGCGAAGGGGGGGTAGGAGGAGGGGCGGAGGAGTT CGGGCGCATGGCGCGGGACGAGTGGTTCGCCGCGGGCGCGAGGGTAGTCG GCGGGTGTTGCAGGACTGGACAGGCACACGTTGCGGAGGTCCGACGAGCG CTCGCTTCGGCCGCCGAGGAAAAAGGGCTGCAGGGGGGAGAAGAGCAGCA GCGCTCGGCTTTGCAACGGTCGTCATGATTTCCCCGCCTCCCTTCGGGTG TGTGCAGCCTGGGTTCGCTGCGTGGTGTTATTGTCGGGGTGCGGGAGGGG GAGGGGCAGCAGCGCCCGGCCTGGCATCAAGAGTCGTCGTGGTTTTTTTT CTCCGGTTGTATGTGGCCTGTGTTCGCTGTGCGGTTTTCGTCGCGGGGTA CGCACGAGCTTTCAGCAGGGAGGTTGCTGTTGGGGTTTGGCCGGGTATGC CCGGAGAGCTGCGAGATATTGTAGATATCAATGGGGAGATATTTGGACGA GGGACGCGAGCGTCGCCAAGGATAAGCTGCTGCGTTACGCACAGCAGTGC GGGAGGCCCTTTTTCTTTCACCGGCACACACCGCACGCCTAGAAATCGTG GTTTCTGTCGTCACTACAAGATCGGTGTCGTAAATCACGATGACCACTAG ACCACTACTGTAGTCAGTAGCTGACTGATCACTGGACTAGTGATGTAGTA GTGTTCACGTGCCAATCAACAATCGGCAAAACTTTTGTACTGAAACACGA TTTATTGGGGACATTTTTGTGGCTACACGTGGTTTACAAGCAAGCGTGCG CCCCTTCGTGCAAGGTTGATTCAAAGTCTCCATCAGTTTGAGAAATCCGC G
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1517:14538..17388-

>mRNA_E-fasciculatus_F_contig1517.3659.1 ID=mRNA_E-fasciculatus_F_contig1517.3659.1|Name=mRNA_E-fasciculatus_F_contig1517.3659.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1320bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1517:14538..17388- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGTCGTGTTCGAGACGGTCCCTTGCCTTGCGGAAGTGCGCGCCATCCT
CTCATTGTTGCAGGCGAGAGGGATGGTCGTGTTCGAGACGGTCCCTTGCC
TTGCGGAAGTGCGCGCCATCCTCTCATTGTTGCAGGCGAGAGGGGACTTC
CGCCCAAGAGTCAGCGCGGTGATCAGCGTGTCGTGTAAAGACGACGAGCA
CTTGAGAAGGACTTCCGCCCAAGAGTCAGCGCGGTGATCAGCGTGTCGTG
TAAAGACGACGAGCACTTGAGAAGCGGAGAGCGCGTCCAAGACTTCGCCG
ACCTCATCTGGCGGCGAGCCGCAGACCAAGATGACACCGAGGGACCAGCA
GCGGTAGTGACGACGACGGCCCCGCCGGCGCGCGTCGTTGCCGTCGGGGT
GAACTGCACATCGCCAAGCCACGCCGCGGGGGCCCTTCGGACGCTAGCGG
CGGCGAGGGCGAGGCCGGATGCGCGTCGCAGCGCGCCTCGGGAAAACCCG
CCCCGGATCGCGCTTGTGGCGTACCCCAACAGCGGGGAAGAGTGGGACGC
CGGCGCCAGGGACTGGGTGGAAGGGACAGGATTGCGCGAAGGGGGGGTAG
GAGGAGGGGCGGAGGAGTTCGGGCGCATGGCGCGGGACGAGTGGTTCGCC
GCGGGCGCGAGGGTAGTCGGCGGGTGTTGCAGGACTGGACAGGCACACGT
TGCGGAGGTCCGACGAGCGCTCGCTTCGGCCGCCGAGGAAAAAGGGCTGC
AGGGGGGAGAAGAGCAGCAGCGCTCGGCTTTGCAACGGTCGTCATGACGG
AGAGCGCGTCCAAGACTTCGCCGACCTCATCTGGCGGCGAGCCGCAGACC
AAGATGACACCGAGGGACCAGCAGCGGTAGTGACGACGACGGCCCCGCCG
GCGCGCGTCGTTGCCGTCGGGGTGAACTGCACATCGCCAAGCCACGCCGC
GGGGGCCCTTCGGACGCTAGCGGCGGCGAGGGCGAGGCCGGATGCGCGTC
GCAGCGCGCCTCGGGAAAACCCGCCCCGGATCGCGCTTGTGGCGTACCCC
AACAGCGGGGAAGAGTGGGACGCCGGCGCCAGGGACTGGGTGGAAGGGAC
AGGATTGCGCGAAGGGGGGGTAGGAGGAGGGGCGGAGGAGTTCGGGCGCA
TGGCGCGGGACGAGTGGTTCGCCGCGGGCGCGAGGGTAGTCGGCGGGTGT
TGCAGGACTGGACAGGCACACGTTGCGGAGGTCCGACGAGCGCTCGCTTC
GGCCGCCGAGGAAAAAGGGCTGCAGGGGGGAGAAGAGCAGCAGCGCTCGG
CTTTGCAACGGTCGTCATGA
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