mRNA_E-fasciculatus_F_contig15165.3658.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-fasciculatus_F_contig15165.3658.1
Unique Name	mRNA_E-fasciculatus_F_contig15165.3658.1
Type	mRNA
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)

Homology

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BLAST of mRNA_E-fasciculatus_F_contig15165.3658.1 vs. uniprot
Match: D8LTB3_ECTSI (Trypsin-like serine protease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTB3_ECTSI)

HSP 1 Score: 595 bits (1535), Expect = 4.010e-203
Identity = 408/531 (76.84%), Postives = 424/531 (79.85%), Query Frame = 1

Query:    1 STEGSTAGKGRSYGGYSYHDDEEEDSTLHSPGLHPYDDSPAMTSKRRGGYRQRADYYHDEGGGIGTTITHLDDHAEQLWHNSPAIRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SEREAWEEGAQKEEQHRAPRGPFDGSVEGEGLVSDXXXXXXXXXXXXXXXXXXXPDLRTHFDLGDLELAAEKALDLLRDSGDVSGGDGGGDGATEPEAGIDDSGPDSRPDLEGXXXXXXXXXXXXXXXGGGGRGQDSAGRQGDGGTSAXXXXXXXXVSGRSTGVPVRLSIGVDTDSAAAVPARGGAAPVSADSTRGQDANRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPGRHSTSFVAVAARAVSPAVCRIDMERLVGSRHDGAPFTDVETGQGSGLIFSSEDGLVLTNAHVVAGARKVTVTLTDGRKFLAEVKGSDALSDLAVLKIDRDASLGQTPLPEVTLGDSQELQVGDWVIAVGNPVGLDSTVTLGIVS 1587
            ST GSTAGKGRSYGGY+YHDD+ EDSTL SP LHPYDDSPAMTS+RRGGYRQRADYYHD+GGGIGTTITHLDDHAEQLWHNSPAIRAA XXXXXXXX                            SEREAWEE   KEEQHR PR PFDGS E EGL SD                   PDLRTHFDLGDLELAAEKALDLLRDSGD+SGGDGG DGATEPEA ID+SGP+ RP    XXXXXXXXXXXXXX  GG RGQDSAGRQ DGGTSA        V+GRST VPVRLS+GVDT++AAAVPA GGAAP+SADS++ QDA   XXXXXXXXXXXXXXX                     XXXXXXXXXXXXXXXXXXXX TPGRHSTSFVAVAARAVSPAVCRIDMERLVG+RHDG+PFTDVETGQGSGLIFSSEDGLVLTNAHVVAGARKVTVTLTDGRKFLAEVKGSDALSDLAVLKIDRDASLGQTPLPEVTLGDSQELQVGDWVIAVGNPVGLDSTVTLGIVS
Sbjct:  298 STGGSTAGKGRSYGGYNYHDDDGEDSTLPSPELHPYDDSPAMTSRRRGGYRQRADYYHDDGGGIGTTITHLDDHAEQLWHNSPAIRAAAXXXXXXXXEAAGDSLDREAGPSTRVGAPLPSRGAAASEREAWEEDPGKEEQHRVPREPFDGSGEREGLFSDGDGLDGGSLAVDDNGVGVDPDLRTHFDLGDLELAAEKALDLLRDSGDISGGDGG-DGATEPEADIDESGPELRPXXXXXXXXXXXXXXXXXXGXGGARGQDSAGRQDDGGTSAAAAAAS--VTGRSTRVPVRLSVGVDTENAAAVPAHGGAAPLSADSSQ-QDAXXXXXXXXXXXXXXXXXXVAVVGGKEKTSGGRLTLPSPPXXXXXXXXXXXXXXXXXXXX-TPGRHSTSFVAVAARAVSPAVCRIDMERLVGTRHDGSPFTDVETGQGSGLIFSSEDGLVLTNAHVVAGARKVTVTLTDGRKFLAEVKGSDALSDLAVLKIDRDASLGQTPLPEVTLGDSQELQVGDWVIAVGNPVGLDSTVTLGIVS 823

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BLAST of mRNA_E-fasciculatus_F_contig15165.3658.1 vs. uniprot
Match: A0A6H5JLL6_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL6_9PHAE)

HSP 1 Score: 591 bits (1524), Expect = 1.900e-197
Identity = 398/531 (74.95%), Postives = 411/531 (77.40%), Query Frame = 1

Query:    1 STEGSTAGKGRSYGGYSYHDDEEEDSTLHSPGLHPYDDSPAMTSKRRGGYRQRADYYHDEGGGIGTTITHLDDHAEQLWHNSPAIRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SEREAWEEGAQKEEQHRAPRGPFDGSVEGEGLVSDXXXXXXXXXXXXXXXXXXXPDLRTHFDLGDLELAAEKALDLLRDSGDVSGGDGGGDGATEPEAGIDDSGPDSRPDLEGXXXXXXXXXXXXXXXGGGGRGQDSAGRQGDGGTSAXXXXXXXXVSGRSTGVPVRLSIGVDTDSAAAVPARGGAAPVSADSTRGQDANRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPGRHSTSFVAVAARAVSPAVCRIDMERLVGSRHDGAPFTDVETGQGSGLIFSSEDGLVLTNAHVVAGARKVTVTLTDGRKFLAEVKGSDALSDLAVLKIDRDASLGQTPLPEVTLGDSQELQVGDWVIAVGNPVGLDSTVTLGIVS 1587
            S EGSTAGKGRSYGGY+YHDD+ EDSTL SPGLHPYDDSPAMTSKRRGGYRQRADYYHD+ GGIGTTITHLDDHAEQLWHNSPAIRAA XXXXXXXXX                           SEREA +EG  KEE HR PR PFDGS E EGL SD  XXXXXXXXXXXXXXXXXPDLRTHFDLGDLELAAEKALDLLRDSGDVSGGDG  DGATEPEAGID+SGP+ RP    XXXXXXXXXXXXXXX GG RGQDSAGRQ DG    XXXXXXX V+GRSTGVPVRL+ GVDT+SAAAVPA GGAAP+S DS+RGQDAN Q                                                         TPGRHSTSFVAVAARAVSPAVCRIDMERLVG+R DG+PFTDVETGQGSGLIFSSEDGLVLTNAHVVAGARKVTVTLTDGRKFLAEVKGSDALSDLAVLKIDRDASLGQTPLPEVTLGDSQELQVGDWVIAVGNPVGLDSTVTLGIVS
Sbjct:  281 SMEGSTAGKGRSYGGYNYHDDDGEDSTLPSPGLHPYDDSPAMTSKRRGGYRQRADYYHDDIGGIGTTITHLDDHAEQLWHNSPAIRAAAXXXXXXXXXAAGDSLDREAGPSPRIGAPPPSPGAAASEREASQEGPGKEE-HRVPREPFDGSAEREGLFSDGDXXXXXXXXXXXXXXXXXPDLRTHFDLGDLELAAEKALDLLRDSGDVSGGDGD-DGATEPEAGIDESGPELRPXXXXXXXXXXXXXXXXXXXXGGARGQDSAGRQDDGXXXXXXXXXXXSVTGRSTGVPVRLTAGVDTESAAAVPAHGGAAPLSGDSSRGQDANIQQELKAEEGKSSSSTGVAVVGSKEKTSGGRLTLPSSPTPAPQAAAIGGSGRGGG----TPGRHSTSFVAVAARAVSPAVCRIDMERLVGTRLDGSPFTDVETGQGSGLIFSSEDGLVLTNAHVVAGARKVTVTLTDGRKFLAEVKGSDALSDLAVLKIDRDASLGQTPLPEVTLGDSQELQVGDWVIAVGNPVGLDSTVTLGIVS 805

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BLAST of mRNA_E-fasciculatus_F_contig15165.3658.1 vs. uniprot
Match: A0A835Z574_9STRA (Trypsin-like cysteine/serine peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z574_9STRA)

HSP 1 Score: 147 bits (371), Expect = 8.130e-36
Identity = 80/106 (75.47%), Postives = 87/106 (82.08%), Query Frame = 1

Query: 1270 VETGQGSGLIFSSEDGLVLTNAHVVAGARKVTVTLTDGRKFLAEVKGSDALSDLAVLKIDRDASLGQTPLPEVTLGDSQELQVGDWVIAVGNPVGLDSTVTLGIVS 1587
            VE GQGSG+IFS+ DGLVLTNAHVV GA KVTVTLTDGRK LA VKG+D L+DLAVLKI+ +      P P   LGDS+EL VGDWVIAVGNPVGLDSTVTLGIVS
Sbjct:   18 VEQGQGSGVIFSA-DGLVLTNAHVVNGANKVTVTLTDGRKLLATVKGADELTDLAVLKIEGEGE--NIPFPVAQLGDSEELSVGDWVIAVGNPVGLDSTVTLGIVS 120

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BLAST of mRNA_E-fasciculatus_F_contig15165.3658.1 vs. uniprot
Match: R7QFP4_CHOCR (PDZ domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFP4_CHOCR)

HSP 1 Score: 147 bits (370), Expect = 4.660e-35
Identity = 88/166 (53.01%), Postives = 104/166 (62.65%), Query Frame = 1

Query: 1150 PGRHSTSFVAVAARAVSPAVCRIDMERLVG------------------SRHDGAPFTDV--ETGQGSGLIFSSEDGLVLTNAHVVAGARKVTVTLTDGRKFLAEVKGSDALSDLAVLKIDRDASLGQTPLPEVTLGDSQELQVGDWVIAVGNPVGLDSTVTLGIVS 1587
            P RH  SFV  A R+V  +V RID ER++                   SR  G P T +  E GQGSG I S+ DG +LTNAHVV  A +VTVTLTDGR F+  VKG+D   DLAV+K+D +       LP  T+G S EL+VGDWVIAVGNPVGLD+TVTLGIVS
Sbjct:  102 PARHPPSFVTQAVRSVGTSVVRIDTERVIRPSSSIPSALDPIFDDPALSRLFGEPPTKIRMERGQGSGFIISA-DGYLLTNAHVVRNAHRVTVTLTDGRSFVGVVKGADEYLDLAVIKVDTEGK----KLPVATMGTSAELEVGDWVIAVGNPVGLDNTVTLGIVS 262

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BLAST of mRNA_E-fasciculatus_F_contig15165.3658.1 vs. uniprot
Match: A0A7S0IP79_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IP79_9EUKA)

HSP 1 Score: 146 bits (369), Expect = 5.180e-35
Identity = 90/156 (57.69%), Postives = 99/156 (63.46%), Query Frame = 1

Query: 1156 RHSTSFVAVAARAVSPAVCRIDMERLVGSRHDGAPFTDV------------ETGQGSGLIFSSEDGLVLTNAHVVAGARKVTVTLTDGRKFLAEVKGSDALSDLAVLKIDRDASLGQTPLPEVTLGDSQELQVGDWVIAVGNPVGLDSTVTLGIVS 1587
            R  TSFV  A  AV PAV RID ERLV    D AP                ETGQGSG+I S +DGL++TNAHVV  A KVTVTLTDGR +   VKGSD   DLA ++I     +G   LP   LG S ELQVGDWVIA+GN VGLDSTVTLGIVS
Sbjct:  112 RKKTSFVTAAVEAVGPAVVRIDTERLV----DRAPLDSYFFPGLEPDGQRKETGQGSGVILS-DDGLIMTNAHVVKNAAKVTVTLTDGRTYEGIVKGSDDFIDLAAVRIK--LPVGGKTLPTAPLGRSDELQVGDWVIAIGNAVGLDSTVTLGIVS 260

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BLAST of mRNA_E-fasciculatus_F_contig15165.3658.1 vs. uniprot
Match: A0A7S3AT22_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AT22_9EUKA)

HSP 1 Score: 143 bits (361), Expect = 8.280e-35
Identity = 87/158 (55.06%), Postives = 97/158 (61.39%), Query Frame = 1

Query: 1150 PGRHSTSFVAVAARAVSPAVCRIDMERLVGSRHDGAPFTDV------------ETGQGSGLIFSSEDGLVLTNAHVVAGARKVTVTLTDGRKFLAEVKGSDALSDLAVLKIDRDASLGQTPLPEVTLGDSQELQVGDWVIAVGNPVGLDSTVTLGIVS 1587
            PGR  TSFV  A   V PAV +ID ER V    D AP                E+GQGSG+I + E GL++TNAHVV  A KVTVTLTDGR F   V+GSD   DLA +KI         PLP   LG S +LQVGDWVIA+GN VGLDSTVTLGIVS
Sbjct:    4 PGRRKTSFVTAAVDTVGPAVVKIDTERFV----DRAPLEGYLFPGLEPDGQRKESGQGSGVILNQE-GLIMTNAHVVKNAAKVTVTLTDGRSFEGTVRGSDDYVDLAAVKIKPSGR----PLPVAPLGRSDDLQVGDWVIAIGNAVGLDSTVTLGIVS 152

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BLAST of mRNA_E-fasciculatus_F_contig15165.3658.1 vs. uniprot
Match: M2XYW7_GALSU (Serine-type endopeptidase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XYW7_GALSU)

HSP 1 Score: 146 bits (368), Expect = 3.130e-34
Identity = 86/162 (53.09%), Postives = 102/162 (62.96%), Query Frame = 1

Query: 1156 RHSTSFVAVAARAVSPAVCRIDMERLVGSRHDGA------------------PFTDVETGQGSGLIFSSEDGLVLTNAHVVAGARKVTVTLTDGRKFLAEVKGSDALSDLAVLKIDRDASLGQTPLPEVTLGDSQELQVGDWVIAVGNPVGLDSTVTLGIVS 1587
            R S+SFV  A +AV P+V RID ER + + +D                    P    E GQGSG I S +DGL+LTNAHVV    KVTVTLTDGR ++  VKG+D L DLAV++ID         LP   LG+S ELQVGDWVIA+GNPVGLD+TVTLGIVS
Sbjct:  204 RRSSSFVTEAVKAVGPSVVRIDTERKISTANDPLLEDPFFKKFFGDEFQRQLPRERTERGQGSGFIIS-KDGLILTNAHVVKNVEKVTVTLTDGRAYVGTVKGTDDLLDLAVIRIDPKGR----ELPVAPLGNSSELQVGDWVIALGNPVGLDNTVTLGIVS 360

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BLAST of mRNA_E-fasciculatus_F_contig15165.3658.1 vs. uniprot
Match: A0A7S0ZG40_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZG40_9RHOD)

HSP 1 Score: 145 bits (366), Expect = 4.700e-34
Identity = 90/163 (55.21%), Postives = 100/163 (61.35%), Query Frame = 1

Query: 1156 RHSTSFVAVAARAVSPAVCRIDMERLVGSRHDGAPFTD-------------------VETGQGSGLIFSSEDGLVLTNAHVVAGARKVTVTLTDGRKFLAEVKGSDALSDLAVLKIDRDASLGQTPLPEVTLGDSQELQVGDWVIAVGNPVGLDSTVTLGIVS 1587
            R +TSFV  A RAV PAV RID ER V +      F D                    E GQGSG I S  DGLV+TNAHVV  A KVTVTLTDGR F   VKG+D L DLA +KI+ +     T LP   LG S +LQVGDWVIAVGNP+GLD+TVTLGIVS
Sbjct:  192 RQTTSFVTAAVRAVGPAVVRIDTERTVTNTGLDPLFEDPLFKKFFGDDLQKQIPKERTERGQGSGFIIS-RDGLVVTNAHVVKDAEKVTVTLTDGRSFTGIVKGTDDLLDLAAVKIEGNG----TDLPVAPLGMSDDLQVGDWVIAVGNPLGLDNTVTLGIVS 349

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BLAST of mRNA_E-fasciculatus_F_contig15165.3658.1 vs. uniprot
Match: A0A0M0JA75_9EUKA (Serine protease n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JA75_9EUKA)

HSP 1 Score: 141 bits (355), Expect = 7.720e-34
Identity = 86/154 (55.84%), Postives = 99/154 (64.29%), Query Frame = 1

Query: 1150 PGRHSTSFVAVAARAVSPAVCRIDMERLVGSRH-DGAPFTDVE-------TGQGSGLIFSSEDGLVLTNAHVVAGARKVTVTLTDGRKFLAEVKGSDALSDLAVLKIDRDASLGQTPLPEVTLGDSQELQVGDWVIAVGNPVGLDSTVTLGIVS 1587
            P R  TSFV  A  +V PAV RID ERLV  +  +G  F  +E       +GQGSG+I + E+G +LTNAHVV  A KVTVTLTDGR F  +VKG D   DLA +KI          LP   LG S +LQVGDWVIA+GN VGLDSTVTLGIVS
Sbjct:   11 PRRQKTSFVTAAVASVGPAVVRIDTERLVDRQPLEGYLFPGLEPDGQRRESGQGSGVIVN-EEGFILTNAHVVKNAAKVTVTLTDGRVFEGQVKGQDDYMDLAAVKIKPTGR----KLPTAPLGRSDDLQVGDWVIAIGNAVGLDSTVTLGIVS 159

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BLAST of mRNA_E-fasciculatus_F_contig15165.3658.1 vs. uniprot
Match: A0A7S3A5R7_9RHOD (Hypothetical protein n=5 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A5R7_9RHOD)

HSP 1 Score: 144 bits (363), Expect = 8.250e-34
Identity = 88/162 (54.32%), Postives = 106/162 (65.43%), Query Frame = 1

Query: 1156 RHSTSFVAVAARAVSPAVCRIDMERLV------------------GSRHDGAPFTDVETGQGSGLIFSSEDGLVLTNAHVVAGARKVTVTLTDGRKFLAEVKGSDALSDLAVLKIDRDASLGQTPLPEVTLGDSQELQVGDWVIAVGNPVGLDSTVTLGIVS 1587
            + S+SFV  A ++V P+V RID ER V                  G   +  P   +E GQGSG I S+ DGL++TNAHVV GA KVTVTLTDGR ++  VKG+D L DLAV+KI+   S G+  LP   LG S EL+VGDWVIAVGNPVGLD+TVTLGIVS
Sbjct:  154 KQSSSFVTRAVQSVGPSVVRIDTERTVTAGNMDPLLEDPLFKKFFGDELNKVPRERLERGQGSGFIIST-DGLLITNAHVVKGADKVTVTLTDGRSYVGAVKGTDDLLDLAVVKIE---SKGKN-LPVALLGVSNELEVGDWVIAVGNPVGLDNTVTLGIVS 310

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig15165.3658.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig15165.3658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LTB3_ECTSI	4.010e-203	76.84	Trypsin-like serine protease n=1 Tax=Ectocarpus si...	[more]
A0A6H5JLL6_9PHAE	1.900e-197	74.95	PDZ domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A835Z574_9STRA	8.130e-36	75.47	Trypsin-like cysteine/serine peptidase domain-cont...	[more]
R7QFP4_CHOCR	4.660e-35	53.01	PDZ domain-containing protein n=1 Tax=Chondrus cri...	[more]
A0A7S0IP79_9EUKA	5.180e-35	57.69	Hypothetical protein n=1 Tax=Calcidiscus leptoporu...	[more]
A0A7S3AT22_9EUKA	8.280e-35	55.06	Hypothetical protein n=1 Tax=Haptolina ericina Tax...	[more]
M2XYW7_GALSU	3.130e-34	53.09	Serine-type endopeptidase n=1 Tax=Galdieria sulphu...	[more]
A0A7S0ZG40_9RHOD	4.700e-34	55.21	Hypothetical protein (Fragment) n=1 Tax=Timspurcki...	[more]
A0A0M0JA75_9EUKA	7.720e-34	55.84	Serine protease n=1 Tax=Chrysochromulina tobinii T...	[more]
A0A7S3A5R7_9RHOD	8.250e-34	54.32	Hypothetical protein n=5 Tax=Rhodosorus marinus Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig15165	contig	E-fasciculatus_F_contig15165:21..2858 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	602.1
Seed ortholog evalue	2.6e-169
Seed eggNOG ortholog	2880.D8LTB3
EggNOG free text desc.	serine-type endopeptidase activity
EggNOG OGs	COG0265@1,KOG1320@2759
COG Functional cat.	O
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	other localisation
Ec32 ortholog description	trypsin-like serine protease
Ec32 ortholog	Ec-12_005910.1
Exons	3
Model size	1587
Cds size	1587
Stop	0
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig15165.3658.1	prot_E-fasciculatus_F_contig15165.3658.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	polypeptide	E-fasciculatus_F_contig15165 21..2858 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927996.7003717-CDS-E-fasciculatus_F_contig15165:20..1379	1622927996.7003717-CDS-E-fasciculatus_F_contig15165:20..1379	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	CDS	E-fasciculatus_F_contig15165 21..1379 +
1695995782.5856166-CDS-E-fasciculatus_F_contig15165:20..1379	1695995782.5856166-CDS-E-fasciculatus_F_contig15165:20..1379	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	CDS	E-fasciculatus_F_contig15165 21..1379 +
1622927996.7174163-CDS-E-fasciculatus_F_contig15165:2206..2362	1622927996.7174163-CDS-E-fasciculatus_F_contig15165:2206..2362	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	CDS	E-fasciculatus_F_contig15165 2207..2362 +
1695995782.600088-CDS-E-fasciculatus_F_contig15165:2206..2362	1695995782.600088-CDS-E-fasciculatus_F_contig15165:2206..2362	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	CDS	E-fasciculatus_F_contig15165 2207..2362 +
1622927996.7308736-CDS-E-fasciculatus_F_contig15165:2786..2858	1622927996.7308736-CDS-E-fasciculatus_F_contig15165:2786..2858	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	CDS	E-fasciculatus_F_contig15165 2787..2858 +
1695995782.6104808-CDS-E-fasciculatus_F_contig15165:2786..2858	1695995782.6104808-CDS-E-fasciculatus_F_contig15165:2786..2858	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	CDS	E-fasciculatus_F_contig15165 2787..2858 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-fasciculatus_F_contig15165:21..2858+
coding sequence from alignment at E-fasciculatus_F_contig15165:21..2858+

protein sequence of mRNA_E-fasciculatus_F_contig15165.3658.1

>prot_E-fasciculatus_F_contig15165.3658.1 ID=prot_E-fasciculatus_F_contig15165.3658.1|Name=mRNA_E-fasciculatus_F_contig15165.3658.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=529bp
STEGSTAGKGRSYGGYSYHDDEEEDSTLHSPGLHPYDDSPAMTSKRRGGY
RQRADYYHDEGGGIGTTITHLDDHAEQLWHNSPAIRAAAAAAAAAAADAA
GDSLDREAAGAPPPPPPSPGAAASEREAWEEGAQKEEQHRAPRGPFDGSV
EGEGLVSDGEGLDSDGPAVDDDDVGVDPDLRTHFDLGDLELAAEKALDLL
RDSGDVSGGDGGGDGATEPEAGIDDSGPDSRPDLEGLELAAEKALDLLRD
DGGGGRGQDSAGRQGDGGTSAAAAAAAASVSGRSTGVPVRLSIGVDTDSA
AAVPARGGAAPVSADSTRGQDANRQQEQEEEEGKSSSSTGVAAVVGGKEK
ASGGRLTLPSPPTPAPKVPPAAIGGRSGGGGGTPGRHSTSFVAVAARAVS
PAVCRIDMERLVGSRHDGAPFTDVETGQGSGLIFSSEDGLVLTNAHVVAG
ARKVTVTLTDGRKFLAEVKGSDALSDLAVLKIDRDASLGQTPLPEVTLGD
SQELQVGDWVIAVGNPVGLDSTVTLGIVS

mRNA from alignment at E-fasciculatus_F_contig15165:21..2858+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-fasciculatus_F_contig15165.3658.1 ID=mRNA_E-fasciculatus_F_contig15165.3658.1|Name=mRNA_E-fasciculatus_F_contig15165.3658.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2838bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15165:21..2858+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TCGACGGAGGGCTCCACCGCTGGTAAGGGCAGGAGCTACGGCGGCTACAG
CTACCACGACGACGAGGAGGAGGACTCCACGCTCCACTCGCCGGGGCTCC
ACCCTTACGACGACTCCCCCGCCATGACCAGCAAGCGGCGAGGCGGCTAC
CGGCAGCGGGCGGACTACTACCACGACGAAGGAGGAGGCATCGGCACCAC
CATCACGCACCTCGACGACCACGCCGAGCAGCTCTGGCACAACAGCCCGG
CGATTCGAGCCGCCGCGGCGGCGGCCGCTGCAGCCGCCGCCGACGCCGCC
GGAGATTCTCTCGACCGAGAGGCGGCCGGAGCGCCGCCGCCGCCGCCGCC
GTCGCCTGGCGCGGCGGCATCTGAGCGGGAAGCTTGGGAGGAGGGCGCAC
AAAAAGAAGAGCAACATCGAGCGCCGAGAGGGCCGTTCGATGGCAGCGTC
GAGGGGGAGGGCCTGGTCTCCGATGGGGAAGGGTTGGATAGCGATGGTCC
CGCCGTTGACGACGATGATGTCGGAGTCGACCCTGATCTGCGCACGCACT
TCGACTTGGGAGACCTAGAGCTCGCGGCAGAGAAAGCTCTCGACTTGCTG
CGAGACAGCGGTGACGTTTCCGGAGGTGATGGCGGCGGCGACGGCGCCAC
TGAGCCTGAGGCTGGTATAGACGACAGCGGGCCTGACTCTCGCCCGGACC
TGGAAGGTCTAGAGCTCGCGGCAGAGAAGGCGCTCGACCTGTTGCGAGAC
GACGGGGGAGGGGGCAGGGGTCAGGATAGCGCTGGCAGGCAAGGTGATGG
GGGCACTAGCGCCGCCGCCGCCGCCGCCGCCGCCAGCGTCAGCGGTAGAT
CGACGGGGGTGCCCGTGCGACTCAGCATAGGCGTAGACACGGATAGCGCC
GCCGCCGTGCCCGCGCGCGGGGGTGCGGCACCCGTGTCTGCTGATAGCAC
TCGGGGGCAAGATGCGAACAGGCAGCAGGAGCAGGAAGAGGAGGAGGGTA
AGTCCTCCTCCTCTACCGGAGTGGCGGCGGTGGTGGGAGGCAAGGAGAAG
GCGAGCGGTGGGCGATTGACCCTACCGTCGCCACCGACGCCGGCGCCGAA
AGTACCGCCGGCCGCTATCGGAGGTAGGAGCGGCGGCGGTGGCGGGACCC
CGGGGCGCCACAGCACGAGCTTCGTCGCGGTGGCTGCGCGGGCCGTGAGC
CCCGCCGTCTGCCGCATTGACATGGAGAGGCTGGTGGGCTCGCGCCACGA
CGGCGCCCCCTTCACGGACGTGGAGACGGGGCAGGGAAGCGGCCTCATCT
TCAGTAGCGAGGACGGGCTGGTGCTGACAAACGCGCACGTGGTGGCCGGG
GCGAGGAAGGTGAGATACGGTTGTACAGGCGGCACTGCAGCTACATTTAG
TGGGTTAGGTTGTACTTCTATACAGGTTTGGAAGGACTGGAAGGTCGAGC
TTTTTTCCGGCCGACGAGAACGCACTCTCAAAACCACCGCATGCCTCCTT
TTAGATGCGTGCTGTTGGTTCAGTGCTCAAGTAGGAGCCTTCGGCGAATG
GAATACCGACAGAGGTAAACAGCAGCACAGCAGAGTACGAGGCGAGGATG
GGAATGGCCAGTTCTGGCTGTATTTCACGCCCTTTTTTTTCTTTTTTTCT
TTTTTCTGGTGGTACGTGCTACCGTGAGACACGCTAATGGTGATATAGCT
GCATTTCGAAGACAATGATAGAGAATAGCACTGCCTGAGAGCATTGTGCC
CGCAGGTTCTCCTCCTTTGTCCTCTTGAGCTCGAGGAGAGACGCTTGCAT
GTAGTCAGTTCTCCTGCGGCGTGTTTGGGCTTGAACCGTCGAAATGTTAA
ATGTTGGGGCACTGAATTTCTGGAGCGCTTCCAGAGCGGTGGCGTAGCTA
AGGTGTCTGAGTCGACCACGCGAGCAAAGTCTCTCGTCGATCCTGCTTGC
TTGACAACGGTACATGCTGTGATTTTCACCGCACGCTTGGCTCGTACAAA
GGGTTTGGTGGAGGTAAGGGCGGCCCGGAGATGTTGTTGCCTTCCGGGTG
GCACGGACTTGTCTGCGCGCCTCCTGGAAGGTCGAAACGCCTCCTCTGCT
AGAACACAACTCTGCTTTGCCTTGAACCGCCCCCTTCCCCTTTTGCTGTG
CCCGCCGCCTGGTTGGTGCTGCCGCTGCCGCTGAAGGTGACCGTGACGCT
GACGGATGGCCGTAAGTTCCTCGCCGAGGTGAAGGGAAGCGACGCGCTGA
GCGACCTCGCCGTGCTGAAGATCGACAGGGACGCGAGCTTGGGCCAGACC
CCGCTACCGGAGGTCACGTTGGGCGACTCGCAGGAGCTACAGGTGGGAGG
GCCGGGGCGGGGTGTACTCGTACTCTATAGCCGTGCATGCCGTAGCCGTT
AGTTACACCAGTGGGGCTTGGGGTGTCGTGCATGCCGTAGCCGTTATAGA
CCATTGGAACTTGCGGTGCGGAATGAAGCTTTGGGGTAGTTCCCTGCTTT
CGTCACGGACGAGGAGAGGGAGGGGGAGGTGCGAGAGGTGTCTCTCTTCC
TGAGCCATGATTCCTGCCCCCTCACACGTCATTGTTGTTGCCAAAGCGTG
CCTTCGGTGTAGTTACACACGGATTTTGTATCGTCGCCTATTGCGTGGAG
GTGGGCGAGTCGGGCAAATAACACGTTTGTTCTGCATATTCCGGAAAAGA
CTCGTTCGTCACGATAAAACGAGAATGGTTGTGCACATGCATGGTCGGTC
CTGCTGCTTGTGGCAGGTCGGCGACTGGGTGATCGCCGTCGGCAACCCGG
TCGGGCTCGACAGCACCGTCACCTTGGGGATCGTTTCA

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15165:21..2858+

>mRNA_E-fasciculatus_F_contig15165.3658.1 ID=mRNA_E-fasciculatus_F_contig15165.3658.1|Name=mRNA_E-fasciculatus_F_contig15165.3658.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3174bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15165:21..2858+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TCGACGGAGGGCTCCACCGCTGGTAAGGGCAGGAGCTACGGCGGCTACAG
CTACCACGACGACGAGGAGGAGGACTCCACGCTCCACTCGCCGGGGCTCC
ACCCTTACGACGACTCCCCCGCCATGACCAGCAAGCGGCGAGGCGGCTAC
CGGCAGCGGGCGGACTACTACCACGACGAAGGAGGAGGCATCGGCACCAC
CATCACGCACCTCGACGACCACGCCGAGCAGCTCTGGCACAACAGCCCGG
CGATTCGAGCCGCCGCGGCGGCGGCCGCTGCAGCCGCCGCCGACGCCGCC
GGAGATTCTCTCGACCGAGAGGCGGCCGGAGCGCCGCCGCCGCCGCCGCC
GTCGCCTGGCGCGGCGGCATCTGAGCGGGAAGCTTGGGAGGAGGGCGCAC
AAAAAGAAGAGCAACATCGAGCGCCGAGAGGGCCGTTCGATGGCAGCGTC
GAGGGGGAGGGCCTGGTCTCCGATGGGGAAGGGTTGGATAGCGATGGTCC
CGCCGTTGACGACGATGATGTCGGAGTCGACCCTGATCTGCGCACGCACT
TCGACTTGGGAGACCTAGAGCTCGCGGCAGAGAAAGCTCTCGACTTGCTG
CGAGACAGCGGTGACGTTTCCGGAGGTGATGGCGGCGGCGACGGCGCCAC
TGAGCCTGAGGCTGGTATAGACGACAGCGGGCCTGACTCTCGCCCGGACC
TGGAAGGTCTAGAGCTCGCGGCAGAGAAGGCGCTCGACCTGTTGCGAGAC
GACGGGGGAGGGGGCAGGGGTCAGGATAGCGCTGGCAGGCAAGGTGATGG
GGGCACTAGCGCCGCCGCCGCCGCCGCCGCCGCCAGCGTCAGCGGTAGAT
CGACGGGGGTGCCCGTGCGACTCAGCATAGGCGTAGACACGGATAGCGCC
GCCGCCGTGCCCGCGCGCGGGGGTGCGGCACCCGTGTCTGCTGATAGCAC
TCGGGGGCAAGATGCGAACAGGCAGCAGGAGCAGGAAGAGGAGGAGGGTA
AGTCCTCCTCCTCTACCGGAGTGGCGGCGGTGGTGGGAGGCAAGGAGAAG
GCGAGCGGTGGGCGATTGACCCTACCGTCGCCACCGACGCCGGCGCCGAA
AGTACCGCCGGCCGCTATCGGAGGTAGGAGCGGCGGCGGTGGCGGGACCC
CGGGGCGCCACAGCACGAGCTTCGTCGCGGTGGCTGCGCGGGCCGTGAGC
CCCGCCGTCTGCCGCATTGACATGGAGAGGCTGGTGGGCTCGCGCCACGA
CGGCGCCCCCTTCACGGACGTGGAGACGGGGCAGGGAAGCGGCCTCATCT
TCAGTAGCGAGGACGGGCTGGTGCTGACAAACGCGCACGTGGTGGCCGGG
GCGAGGAAGTCGACGGAGGGCTCCACCGCTGGTAAGGGCAGGAGCTACGG
CGGCTACAGCTACCACGACGACGAGGAGGAGGACTCCACGCTCCACTCGC
CGGGGCTCCACCCTTACGACGACTCCCCCGCCATGACCAGCAAGCGGCGA
GGCGGCTACCGGCAGCGGGCGGACTACTACCACGACGAAGGAGGAGGCAT
CGGCACCACCATCACGCACCTCGACGACCACGCCGAGCAGCTCTGGCACA
ACAGCCCGGCGATTCGAGCCGCCGCGGCGGCGGCCGCTGCAGCCGCCGCC
GACGCCGCCGGAGATTCTCTCGACCGAGAGGCGGCCGGAGCGCCGCCGCC
GCCGCCGCCGTCGCCTGGCGCGGCGGCATCTGAGCGGGAAGCTTGGGAGG
AGGGCGCACAAAAAGAAGAGCAACATCGAGCGCCGAGAGGGCCGTTCGAT
GGCAGCGTCGAGGGGGAGGGCCTGGTCTCCGATGGGGAAGGGTTGGATAG
CGATGGTCCCGCCGTTGACGACGATGATGTCGGAGTCGACCCTGATCTGC
GCACGCACTTCGACTTGGGAGACCTAGAGCTCGCGGCAGAGAAAGCTCTC
GACTTGCTGCGAGACAGCGGTGACGTTTCCGGAGGTGATGGCGGCGGCGA
CGGCGCCACTGAGCCTGAGGCTGGTATAGACGACAGCGGGCCTGACTCTC
GCCCGGACCTGGAAGGTCTAGAGCTCGCGGCAGAGAAGGCGCTCGACCTG
TTGCGAGACGACGGGGGAGGGGGCAGGGGTCAGGATAGCGCTGGCAGGCA
AGGTGATGGGGGCACTAGCGCCGCCGCCGCCGCCGCCGCCGCCAGCGTCA
GCGGTAGATCGACGGGGGTGCCCGTGCGACTCAGCATAGGCGTAGACACG
GATAGCGCCGCCGCCGTGCCCGCGCGCGGGGGTGCGGCACCCGTGTCTGC
TGATAGCACTCGGGGGCAAGATGCGAACAGGCAGCAGGAGCAGGAAGAGG
AGGAGGGTAAGTCCTCCTCCTCTACCGGAGTGGCGGCGGTGGTGGGAGGC
AAGGAGAAGGCGAGCGGTGGGCGATTGACCCTACCGTCGCCACCGACGCC
GGCGCCGAAAGTACCGCCGGCCGCTATCGGAGGTAGGAGCGGCGGCGGTG
GCGGGACCCCGGGGCGCCACAGCACGAGCTTCGTCGCGGTGGCTGCGCGG
GCCGTGAGCCCCGCCGTCTGCCGCATTGACATGGAGAGGCTGGTGGGCTC
GCGCCACGACGGCGCCCCCTTCACGGACGTGGAGACGGGGCAGGGAAGCG
GCCTCATCTTCAGTAGCGAGGACGGGCTGGTGCTGACAAACGCGCACGTG
GTGGCCGGGGCGAGGAAGGTGACCGTGACGCTGACGGATGGCCGTAAGTT
CCTCGCCGAGGTGAAGGGAAGCGACGCGCTGAGCGACCTCGCCGTGCTGA
AGATCGACAGGGACGCGAGCTTGGGCCAGACCCCGCTACCGGAGGTCACG
TTGGGCGACTCGCAGGAGCTACAGGTGACCGTGACGCTGACGGATGGCCG
TAAGTTCCTCGCCGAGGTGAAGGGAAGCGACGCGCTGAGCGACCTCGCCG
TGCTGAAGATCGACAGGGACGCGAGCTTGGGCCAGACCCCGCTACCGGAG
GTCACGTTGGGCGACTCGCAGGAGCTACAGGTCGGCGACTGGGTGATCGC
CGTCGGCAACCCGGTCGGGCTCGACAGCACCGTCACCTTGGGGATCGTTT
CAGTCGGCGACTGGGTGATCGCCGTCGGCAACCCGGTCGGGCTCGACAGC
ACCGTCACCTTGGGGATCGTTTCA