prot_E-fasciculatus_F_contig15156.3652.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15156.3652.1
Unique Nameprot_E-fasciculatus_F_contig15156.3652.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length170
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15156.3652.1 vs. uniprot
Match: D7FWF5_ECTSI (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWF5_ECTSI)

HSP 1 Score: 359 bits (922), Expect = 3.030e-124
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 
Query:    1 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGKNTLACLCAIEEDSAPMKIYPLPHMFVQKDLVPDMTNFYEQYKSIEPWLKTKKDKDPDVEHLQSIQDRKKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIDDSRDDYTKERLESLDDAFKLFR 170
            MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGKNTLACLCAIEEDSAPMKIYPLPHMFVQKDLVPDMTNFYEQYKSIEPWLKTKKDKDPDVEHLQSIQDRKKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIDDSRDDYTKERLESLDDAFKLFR
Sbjct:   80 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGKNTLACLCAIEEDSAPMKIYPLPHMFVQKDLVPDMTNFYEQYKSIEPWLKTKKDKDPDVEHLQSIQDRKKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIDDSRDDYTKERLESLDDAFKLFR 249
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15156.3652.1 vs. uniprot
Match: A0A6H5JQA7_9PHAE (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQA7_9PHAE)

HSP 1 Score: 349 bits (896), Expect = 7.880e-121
Identity = 169/179 (94.41%), Postives = 169/179 (94.41%), Query Frame = 0 
Query:    1 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGKNTLACLCAIEEDSAPMKIYPLPHMFVQKDLVPDMTNFYEQYKSIEPWLKTKKDKDPDVEHLQSIQDRKKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQ---------AYRWIDDSRDDYTKERLESLDDAFKLFR 170
            MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGKNTLACLCAIEEDSAPMKIYPLPHMFVQKDLVPDMTNFYEQYKSIEPWLKTKKDKDPDVEHLQSIQDRKKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQ         AYRWIDDSRDDYTKERLE LDDAFKLFR
Sbjct:   35 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGKNTLACLCAIEEDSAPMKIYPLPHMFVQKDLVPDMTNFYEQYKSIEPWLKTKKDKDPDVEHLQSIQDRKKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQGGVEVGAVEAYRWIDDSRDDYTKERLELLDDAFKLFR 213
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15156.3652.1 vs. uniprot
Match: A0A836C854_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C854_9STRA)

HSP 1 Score: 308 bits (790), Expect = 2.170e-104
Identity = 140/170 (82.35%), Postives = 158/170 (92.94%), Query Frame = 0 
Query:    1 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGKNTLACLCAIEEDSAPMKIYPLPHMFVQKDLVPDMTNFYEQYKSIEPWLKTKKDKDPDVEHLQSIQDRKKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIDDSRDDYTKERLESLDDAFKLFR 170
            MVLDAL+KIKNEQDPTLTFRRSCREGICGSCAMNI+G+NTLACLC I+ +S+ +K+ PLPHM+V KDLVPDMTNFY+QYKSIEPWLKTK  K  D EHLQS++DRKKLDGMYECI+CACCST+CPSYWWN DKYLGPAVLMQAYRWI+DSRD+YT+ERLE LDDAFKL+R
Sbjct:   63 MVLDALLKIKNEQDPTLTFRRSCREGICGSCAMNIDGRNTLACLCYIDRNSSSIKVNPLPHMYVVKDLVPDMTNFYDQYKSIEPWLKTKTPKKDDKEHLQSVEDRKKLDGMYECIMCACCSTACPSYWWNGDKYLGPAVLMQAYRWIEDSRDEYTRERLEQLDDAFKLYR 232
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15156.3652.1 vs. uniprot
Match: A0A835Z536_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z536_9STRA)

HSP 1 Score: 306 bits (783), Expect = 2.700e-103
Identity = 142/170 (83.53%), Postives = 155/170 (91.18%), Query Frame = 0 
Query:    1 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGKNTLACLCAIEEDSAPMKIYPLPHMFVQKDLVPDMTNFYEQYKSIEPWLKTKKDKDPDVEHLQSIQDRKKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIDDSRDDYTKERLESLDDAFKLFR 170
            MVLDAL+KIKNEQDPTLTFRRSCREGICGSCAMNING+NTLACL  I++ S+  K+ PLPHM+V KDLVPDMTNFY+QYKSIEPWLKTK  K  D EHLQSI DRKKLDGMYECILCACCSTSCPSYWWN DKYLGPAVLMQAYRWI+DSRD++T+ERLE LDDAFKL+R
Sbjct:   65 MVLDALLKIKNEQDPTLTFRRSCREGICGSCAMNINGRNTLACLAYIDKSSSSTKVNPLPHMYVVKDLVPDMTNFYDQYKSIEPWLKTKTPKKDDKEHLQSIADRKKLDGMYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIEDSRDEFTRERLEQLDDAFKLYR 234
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15156.3652.1 vs. uniprot
Match: W7U0Z2_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0Z2_9STRA)

HSP 1 Score: 300 bits (768), Expect = 8.860e-101
Identity = 142/172 (82.56%), Postives = 156/172 (90.70%), Query Frame = 0 
Query:    1 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGKNTLACLCAIEEDSAPMKIYPLPHMFVQKDLVPDMTNFYEQYKSIEPWLKTK--KDKDPDVEHLQSIQDRKKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIDDSRDDYTKERLESLDDAFKLFR 170
            MVLDAL KIKNEQDPTLTFRRSCREGICGSCAMNI+G NTLACL  I +   P KIYPLPHM+V KDLVPDMTNFY+QYKSIEPWL+TK  + KDP+ EHLQS +DRKKLDGMYECILCACCST+CPSYWW ADKYLGPAVLMQAYRWI+DSRD+YTKERLE+LDD+FKL+R
Sbjct:   79 MVLDALFKIKNEQDPTLTFRRSCREGICGSCAMNIDGTNTLACLSYINKGPEPTKIYPLPHMYVLKDLVPDMTNFYDQYKSIEPWLQTKAVEAKDPNKEHLQSKEDRKKLDGMYECILCACCSTACPSYWWAADKYLGPAVLMQAYRWIEDSRDEYTKERLEALDDSFKLYR 250
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15156.3652.1 vs. uniprot
Match: A0A7R9W5S4_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W5S4_9STRA)

HSP 1 Score: 296 bits (758), Expect = 1.270e-99
Identity = 144/177 (81.36%), Postives = 154/177 (87.01%), Query Frame = 0 
Query:    1 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGKNTLACLCAIEEDSA------PMKIYPLPHMFVQKDLVPDMTNFYEQYKSIEPWLKTKKDKDP-DVEHLQSIQDRKKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIDDSRDDYTKERLESLDDAFKLFR 170
            MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNI+G NTLACLC IE   +        KIYPLPHM+V KDLVPDM NFYEQY+SIEPWLK KK K+P   E+LQS +DR KLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWI+DSRDD+TKERLE LDDAFKL+R
Sbjct:   52 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIDGTNTLACLCYIEPKGSGDTSGKATKIYPLPHMYVVKDLVPDMGNFYEQYRSIEPWLKKKKGKEPGQAEYLQSREDRAKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIEDSRDDFTKERLEDLDDAFKLYR 228
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15156.3652.1 vs. uniprot
Match: A0A7S0LTD8_9EUKA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LTD8_9EUKA)

HSP 1 Score: 298 bits (764), Expect = 1.490e-99
Identity = 139/170 (81.76%), Postives = 153/170 (90.00%), Query Frame = 0 
Query:    1 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGKNTLACLCAIEEDSAPMKIYPLPHMFVQKDLVPDMTNFYEQYKSIEPWLKTKKDKDPDVEHLQSIQDRKKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIDDSRDDYTKERLESLDDAFKLFR 170
            MVLDALIKIKNEQD TLTFRRSCREGICGSCAMNING NTLACLC I +DS PM IYPLPHM + KDLVPD++NFYEQYKSI+PWL+T  +KDP+ EHLQS++DRKKLDGMYECILCACCSTSCPSYWWN DKYLGPAVLMQAYRWI DSRD  T+ERL +LDD +KL+R
Sbjct:  121 MVLDALIKIKNEQDQTLTFRRSCREGICGSCAMNINGGNTLACLCNITDDSEPMTIYPLPHMEIVKDLVPDLSNFYEQYKSIQPWLQTDVEKDPNQEHLQSVEDRKKLDGMYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIADSRDTKTEERLAALDDQWKLYR 290
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15156.3652.1 vs. uniprot
Match: A0A7S0PK69_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=2 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PK69_9STRA)

HSP 1 Score: 291 bits (746), Expect = 1.360e-97
Identity = 140/172 (81.40%), Postives = 156/172 (90.70%), Query Frame = 0 
Query:    1 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGKNTLACLCAIEEDSAPM-KIYPLPHMFVQKDLVPDMTNFYEQYKSIEPWLKTKKDKDP-DVEHLQSIQDRKKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIDDSRDDYTKERLESLDDAFKLFR 170
            MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNI+G NTLACLC I++ SA   KIYPLPHM+V KDLVPDM+NFYEQY+SIEPWL+T K+K+    E LQ+ ++R KLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWI+DSRD++TKERLE LDDAFKL+R
Sbjct:   67 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIDGTNTLACLCYIDDKSAAATKIYPLPHMYVVKDLVPDMSNFYEQYRSIEPWLQTTKEKEEGQKEWLQTRENRAKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIEDSRDEFTKERLEELDDAFKLYR 238
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15156.3652.1 vs. uniprot
Match: A0A7S2LAL1_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LAL1_9STRA)

HSP 1 Score: 290 bits (742), Expect = 7.450e-97
Identity = 140/172 (81.40%), Postives = 153/172 (88.95%), Query Frame = 0 
Query:    1 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGKNTLACLCAIE-EDSAPMKIYPLPHMFVQKDLVPDMTNFYEQYKSIEPWLKTKKDKDP-DVEHLQSIQDRKKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIDDSRDDYTKERLESLDDAFKLFR 170
            MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNI+G NTLACLC I  E S+  KIYPLPHM+V KDLVPDM+NFYEQY+SIEPWL+T + K+P   E LQ+ +DR KLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWI+DSRDDY K+RL  LDDAFKL+R
Sbjct:   74 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIDGSNTLACLCYINNESSSATKIYPLPHMYVIKDLVPDMSNFYEQYRSIEPWLQTVQSKEPGQKEWLQTKEDRAKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIEDSRDDYGKKRLAELDDAFKLYR 245
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15156.3652.1 vs. uniprot
Match: A0A482S9J5_9ARCH (Succinate dehydrogenase iron-sulfur subunit n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S9J5_9ARCH)

HSP 1 Score: 286 bits (733), Expect = 4.550e-96
Identity = 136/171 (79.53%), Postives = 153/171 (89.47%), Query Frame = 0 
Query:    1 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGKNTLACLCAIEEDSAPMKIYPLPHMFVQKDLVPDMTNFYEQYKSIEPWLKTKKDKDPDV-EHLQSIQDRKKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIDDSRDDYTKERLESLDDAFKLFR 170
            MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNI+G NTLACLC IE+++    I PLPHM+V KDLV D++NFY+QYKSI+PWL+TK   D +  EHLQS +DRKKLDGMYECILCACCST+CPSYWWNADKYLGPAVLMQAYRWI+DSRD+ TKERLE LDD+FKL+R
Sbjct:   38 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIDGTNTLACLCYIEKNAESTAINPLPHMYVVKDLVTDLSNFYDQYKSIKPWLQTKASHDLNKGEHLQSKEDRKKLDGMYECILCACCSTACPSYWWNADKYLGPAVLMQAYRWIEDSRDELTKERLEELDDSFKLYR 208
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15156.3652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWF5_ECTSI3.030e-124100.00Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A6H5JQA7_9PHAE7.880e-12194.41Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A836C854_9STRA2.170e-10482.35Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A835Z536_9STRA2.700e-10383.53Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
W7U0Z2_9STRA8.860e-10182.56Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A7R9W5S4_9STRA1.270e-9981.36Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A7S0LTD8_9EUKA1.490e-9981.76Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A7S0PK69_9STRA1.360e-9781.40Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A7S2LAL1_9STRA7.450e-9781.40Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A482S9J5_9ARCH4.550e-9679.53Succinate dehydrogenase iron-sulfur subunit n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13534Fer4_17coord: 113..150
e-value: 1.0E-4
score: 22.7
NoneNo IPR availablePANTHERPTHR11921:SF29SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT, MITOCHONDRIALcoord: 1..170
NoneNo IPR availablePANTHERPTHR11921SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEINcoord: 1..170
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 1..71
e-value: 8.3E-33
score: 114.7
IPR009051Alpha-helical ferredoxinGENE3D1.10.1060.10coord: 72..170
e-value: 1.1E-43
score: 150.2
IPR009051Alpha-helical ferredoxinSUPERFAMILY46548alpha-helical ferredoxincoord: 72..168
IPR025192Succinate dehydogenase/fumarate reductase N-terminalPFAMPF13085Fer2_3coord: 1..76
e-value: 3.0E-27
score: 94.8
IPR004489Succinate dehydrogenase/fumarate reductase iron-sulphur proteinTIGRFAMTIGR00384TIGR00384coord: 1..169
e-value: 4.0E-66
score: 220.6
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved sitePROSITEPS001984FE4S_FER_1coord: 114..125
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 23..31
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROSITEPS513794FE4S_FER_2coord: 104..134
score: 7.676
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 1..62
score: 10.168
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 1..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15156contigE-fasciculatus_F_contig15156:5..3085 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15156.3652.1mRNA_E-fasciculatus_F_contig15156.3652.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15156 2..3085 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15156.3652.1 ID=prot_E-fasciculatus_F_contig15156.3652.1|Name=mRNA_E-fasciculatus_F_contig15156.3652.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=170bp
MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGKNTLACLCAIEED
SAPMKIYPLPHMFVQKDLVPDMTNFYEQYKSIEPWLKTKKDKDPDVEHLQ
SIQDRKKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIDDS
RDDYTKERLESLDDAFKLFR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0360102Fe-2S_ferredoxin-like_sf
IPR0010412Fe-2S_ferredoxin-type
IPR0178964Fe4S_Fe-S-bd
IPR0060582Fe2S_fd_BS
IPR0179004Fe4S_Fe_S_CS
IPR004489Succ_DH/fum_Rdtase_Fe-S
IPR025192Succ_DH/fum_Rdtase_N
IPR009051Helical_ferredxn
IPR012675Beta-grasp_dom_sf