mRNA_E-fasciculatus_F_contig1515.3649.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1515.3649.1 vs. uniprot
Match: D7FY81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY81_ECTSI) HSP 1 Score: 582 bits (1501), Expect = 8.590e-200 Identity = 304/349 (87.11%), Postives = 310/349 (88.83%), Query Frame = 3
Query: 111 MFLRAIRAAEPALKELSRRVFSPWKGNHVACGDLSSTIIPWGFVSQEKVSESVRPDRAGDGPGDDSRVEKRAEHLNLDTWEFLRGAELAYRCAAGLFAPPPHKRKHPLPFEEATAAAPAFGQAGTCRPRFEGELVAGSRRECDGRGSAAGXXXXXXXXXVSVNVGPDLPPQRAEGGRATPTDFFDFDVASPEMSMFLNDVLESYRIQGLVPRLSVASVEAKLCKVGVRLGGISKNTNFGMMSADEARYHLTMGMLGPEGVVINELEGRAPQRVIADVELTCEEEFVVEDGAGNVVHKLESQGPKARKGNVHYITLQSNIGRDTELEWQITNINDVIKPTFNYYFSRFGH 1157
MFLRAIRAAEP LKELSRRVFSPWKGNHVACGDLSSTIIPWGFVSQ+KVSESVRPDRAGDGPGDD RVEKRAEHLNLDTWEFLRGAELAYRCAAGLFAPPPHKRK P FEEA AAPAFGQAG SR EC G XXXXXXXXX S N+GPD+PPQRA+GGR TPTDFFDFDVASPEMSMFLNDVLESYR QGLVPRLSVASVEAKLCKVGVRLGGISKNTNFGMMSADEARYHLTMGMLGPEGV+INELEGRAPQRVIADVELTCEEEFVVEDG GNVVHKLESQGPK VHYITLQSNIG+D ELEWQITNINDVIKPTFNYYFSRFGH
Sbjct: 1 MFLRAIRAAEPTLKELSRRVFSPWKGNHVACGDLSSTIIPWGFVSQQKVSESVRPDRAGDGPGDDGRVEKRAEHLNLDTWEFLRGAELAYRCAAGLFAPPPHKRKDPXXFEEAATAAPAFGQAG-------------SRGECGGXXXXXXXXXXXXXXXXSANLGPDMPPQRAQGGRTTPTDFFDFDVASPEMSMFLNDVLESYRAQGLVPRLSVASVEAKLCKVGVRLGGISKNTNFGMMSADEARYHLTMGMLGPEGVLINELEGRAPQRVIADVELTCEEEFVVEDGKGNVVHKLESQGPK-----VHYITLQSNIGKDAELEWQITNINDVIKPTFNYYFSRFGH 331
BLAST of mRNA_E-fasciculatus_F_contig1515.3649.1 vs. uniprot
Match: W7TAG0_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAG0_9STRA) HSP 1 Score: 103 bits (257), Expect = 1.890e-20 Identity = 66/170 (38.82%), Postives = 95/170 (55.88%), Query Frame = 3
Query: 654 DFFDFDVASPEMSMFLNDVLESYRIQGLVPRLSVASVEAKLCKVGVRLGGISKNTN--FGMMSADEARYHLTMGMLGPEGVVINELEGRAPQRVIADVELTCEEEFVVEDG--------AGNVVHKLESQGPKARKGNV----HYITLQSN-IGRDTELEWQITNINDVI 1118
DF + + +P++S FL D+ SY G+ P L V SV AKL + V G +SKNT FG M EA H+ G++GPEG ++ ELEG P+R++A+VEL+ EE F + N LE ++G + HY T +S+ G + +LEW ++NINDVI
Sbjct: 124 DFTNSNYCTPDLSCFLEDIKRSYTEWGVKPCLHVESVRAKLRCLRVEEGLLSKNTYALFGTMGRYEALTHIWEGVIGPEGRLLQELEGNVPRRLVAEVELSVEESFWFQSRPATAWPRVGNNAEQDLEQGLTGGKQGEMKKRTHYFTFESDYFGDEGQLEWVVSNINDVI 293 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1515.3649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1515.3649.1 >prot_E-fasciculatus_F_contig1515.3649.1 ID=prot_E-fasciculatus_F_contig1515.3649.1|Name=mRNA_E-fasciculatus_F_contig1515.3649.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=350bp MFLRAIRAAEPALKELSRRVFSPWKGNHVACGDLSSTIIPWGFVSQEKVSback to top mRNA from alignment at E-fasciculatus_F_contig1515:2081..8106- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1515.3649.1 ID=mRNA_E-fasciculatus_F_contig1515.3649.1|Name=mRNA_E-fasciculatus_F_contig1515.3649.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6026bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1515:2081..8106- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1515:2081..8106- >mRNA_E-fasciculatus_F_contig1515.3649.1 ID=mRNA_E-fasciculatus_F_contig1515.3649.1|Name=mRNA_E-fasciculatus_F_contig1515.3649.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2100bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1515:2081..8106- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |