mRNA_E-fasciculatus_F_contig15131.3643.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15131.3643.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE) HSP 1 Score: 129 bits (324), Expect = 3.840e-32 Identity = 61/88 (69.32%), Postives = 68/88 (77.27%), Query Frame = 1
Query: 1 GSAEADREVLLHFFRTTGGESWKRRGGWAENADNLDSWYGVTTNAEGRVVKLELRGRKNRFGSYVGNNVTGVIPPELGGLGALEVLSL 264
GSAE DREVLLHFFR+TGG W + GWAENAD+L SWYGVTTNA+GRVVK+EL G ++ Y GNNV G IP ELG LGALE L L
Sbjct: 12 GSAETDREVLLHFFRSTGGNCWTHQEGWAENADDLGSWYGVTTNADGRVVKMELHGERDYVSLYTGNNVIGAIPRELGRLGALEKLDL 99
BLAST of mRNA_E-fasciculatus_F_contig15131.3643.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE) HSP 1 Score: 127 bits (320), Expect = 1.320e-31 Identity = 65/89 (73.03%), Postives = 71/89 (79.78%), Query Frame = 1
Query: 1 GSAEADREVLLHFFRTTGGESWKRRGGWAENADNLDSWYGVTTNAEGRVVKLELRG-RKNRFGSYVGNNVTGVIPPELGGLGALEVLSL 264
GSAE DREVLLHFFR+TGG W + GWAENAD+L SWYGVT+NAEGRVVKLEL G R + G Y GNNVTG IP LG LGALEVL+L
Sbjct: 17 GSAEIDREVLLHFFRSTGGNCWTHQEGWAENADDLGSWYGVTSNAEGRVVKLELHGERLDDGGVYTGNNVTGGIPRGLGRLGALEVLNL 105
BLAST of mRNA_E-fasciculatus_F_contig15131.3643.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI) HSP 1 Score: 119 bits (298), Expect = 1.230e-28 Identity = 59/91 (64.84%), Postives = 67/91 (73.63%), Query Frame = 1
Query: 1 GSAEADREVLLHFFRTTGGESWKRRGGWAENADNLDSWYGVTTNAEGRVVKLELRG--RKNRFGSYVGNNVTGVIPPELGGLGALEVLSLG 267
GSA+ DRE LLHF+RT GGESW + GWAENAD+L SW+GVTTNAEGRVVKLEL+G G GN++ G IPPE G LGAL L LG
Sbjct: 29 GSAQTDRETLLHFYRTAGGESWTCKDGWAENADDLGSWHGVTTNAEGRVVKLELQGGPEPQPGGFEKGNSIIGAIPPEFGRLGALTTLHLG 119
BLAST of mRNA_E-fasciculatus_F_contig15131.3643.1 vs. uniprot
Match: D7G3R3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3R3_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 3.440e-14 Identity = 40/85 (47.06%), Postives = 52/85 (61.18%), Query Frame = 1
Query: 7 AEADREVLLHFFRTTGGESWKRRGGWAENADNLDSWYGVTTNAEGRVVKLELRGRKNRFGSYVGNNVTGVIPPELGGLGALEVLS 261
A ADR+ L+ F T G +W+ +G W ++ L +WYGV NAEGRVVKL L NN+ G++PPELG LGALE L+
Sbjct: 283 ASADRDALITLFHETRGANWREKGNWG-TSEVLGTWYGVDVNAEGRVVKLSL----------YNNNLQGLLPPELGKLGALEHLA 356
BLAST of mRNA_E-fasciculatus_F_contig15131.3643.1 vs. uniprot
Match: A0A6B1AF42_9BACT (Uncharacterized protein n=2 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A6B1AF42_9BACT) HSP 1 Score: 77.8 bits (190), Expect = 4.510e-14 Identity = 41/87 (47.13%), Postives = 50/87 (57.47%), Query Frame = 1
Query: 13 ADREVLLHFFRTTGGESWKRRGGWAENADNLDSWYGVTTNAEGRVVKLELRGRKNRFGSY---VGNNVTGVIPPELGGLGALEVLSL 264
+DR L+ + TGG +W+ GW + LD WYGV TNA GRVV+LEL R+ G V NN+TG IP ELG L L L L
Sbjct: 385 SDRAALVALYEATGGPNWRNNDGWLSDRP-LDEWYGVDTNASGRVVRLELVARERVGGGTTRRVSNNLTGQIPAELGNLDGLHTLEL 470
BLAST of mRNA_E-fasciculatus_F_contig15131.3643.1 vs. uniprot
Match: D7G450_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G450_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 1.770e-13 Identity = 42/86 (48.84%), Postives = 49/86 (56.98%), Query Frame = 1
Query: 7 AEADREVLLHFFRTTGGESWKRRGGWAENADNLDSWYGVTTNAEGRVVKLELRGRKNRFGSYVGNNVTGVIPPELGGLGALEVLSL 264
A DR VL+ F TT G SW W ++ +L WYGVT NAEGRV KL+L NN+TG IPP LGGL AL +L L
Sbjct: 314 ARTDRTVLMELFNTTKGPSWTTSTAWGTSS-SLGEWYGVTVNAEGRVTKLDLEK----------NNLTGPIPPSLGGLTALLLLRL 388
BLAST of mRNA_E-fasciculatus_F_contig15131.3643.1 vs. uniprot
Match: A0A7K1ZHU6_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Bacteroidetes bacterium SB0668_bin_1 TaxID=2604896 RepID=A0A7K1ZHU6_9BACT) HSP 1 Score: 70.9 bits (172), Expect = 1.260e-12 Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = 1
Query: 1 GSAEADREVLLHFFRTTGGESWKRRGGWAENADNLDSWYGVTTNAEGRVVKLELRGRKNRFGSYVGNNVTGVIPPELGGLGALEVLS 261
GS E DR L+ F+ +TGG+SW+ W + LD W+GV T+A+GRV +L L + N ++G IP ELG L LEVLS
Sbjct: 44 GSVEDDRNALIAFYDSTGGDSWRGNVYWKSDKP-LDQWFGVFTDADGRVTELHL----------ISNRLSGEIPAELGNLPKLEVLS 119
BLAST of mRNA_E-fasciculatus_F_contig15131.3643.1 vs. uniprot
Match: A0A7X3PID0_9BACT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A7X3PID0_9BACT) HSP 1 Score: 72.0 bits (175), Expect = 4.710e-12 Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 1
Query: 7 AEADREVLLHFFRTTGGESWKRRGGWAENADNLDSWYGVTTNAEGRVVKLELRGRKNRFGSYVGNNVTGVIPPELGGLGALEVL 258
+ DRE+L+ + TTGG W W +A LD W+GV+ + EGRVV L ++ NN+TG+IPPELGGL L+VL
Sbjct: 987 SSTDREILVALYETTGGPRWTISENWLTDAP-LDRWHGVSVDGEGRVVGLH----------FLDNNLTGLIPPELGGLDELQVL 1059
BLAST of mRNA_E-fasciculatus_F_contig15131.3643.1 vs. uniprot
Match: A0A6N8ZGC2_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6N8ZGC2_9CHLR) HSP 1 Score: 71.2 bits (173), Expect = 8.360e-12 Identity = 39/95 (41.05%), Postives = 49/95 (51.58%), Query Frame = 1
Query: 1 GSAEADREVLLHFFRTTGGESWKRRGGWAENADNLDSWYGVTTNAEGRVVKLELRGRKNRF------GSYVGNNVTGVIPPELGGLGALEVLSLG 267
G+ ADR L+ F TGG W W + LD WYGVT NA GRV+ L+L + + G G+ +TG +PPEL L LE L LG
Sbjct: 214 GATTADRNALIALFNATGGPDWTDNTNWLSDRP-LDEWYGVTANANGRVIALKLYSQDSLPSPFSLPGETNGSGLTGYLPPELANLSKLERLELG 307
BLAST of mRNA_E-fasciculatus_F_contig15131.3643.1 vs. uniprot
Match: A0A6L7LF73_9CHLR (Uncharacterized protein n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A6L7LF73_9CHLR) HSP 1 Score: 68.2 bits (165), Expect = 1.610e-11 Identity = 44/87 (50.57%), Postives = 51/87 (58.62%), Query Frame = 1
Query: 7 AEADREVLLHFFRTTGGESWK-RRGGWAENADNLDSWYGVTTNAEGRVVKLELRGRKNRFGSYVGNNVTGVIPPELGGLGALEVLSL 264
AE DR L+ F+ TGG+SW R W + LD W+GVTT+A+GRVVKL L G VG N G IPPELG L L LSL
Sbjct: 4 AERDRAALVAFYNATGGDSWNISRHNWLSDLP-LDHWHGVTTDADGRVVKLLLYG--------VGLN--GKIPPELGSLTELTDLSL 79 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15131.3643.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15131.3643.1 >prot_E-fasciculatus_F_contig15131.3643.1 ID=prot_E-fasciculatus_F_contig15131.3643.1|Name=mRNA_E-fasciculatus_F_contig15131.3643.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=132bp GSAEADREVLLHFFRTTGGESWKRRGGWAENADNLDSWYGVTTNAEGRVVback to top mRNA from alignment at E-fasciculatus_F_contig15131:91..2960- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15131.3643.1 ID=mRNA_E-fasciculatus_F_contig15131.3643.1|Name=mRNA_E-fasciculatus_F_contig15131.3643.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2870bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15131:91..2960- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15131:91..2960- >mRNA_E-fasciculatus_F_contig15131.3643.1 ID=mRNA_E-fasciculatus_F_contig15131.3643.1|Name=mRNA_E-fasciculatus_F_contig15131.3643.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=792bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15131:91..2960- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |