prot_E-fasciculatus_F_contig1513.3640.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1513.3640.1
Unique Nameprot_E-fasciculatus_F_contig1513.3640.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length64
Homology
BLAST of mRNA_E-fasciculatus_F_contig1513.3640.1 vs. uniprot
Match: D7FNM1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNM1_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 4.180e-37
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0
Query:    1 RIVQQQLAKEEQRLCVICQENERSVLLLPCRHLCVCRGCSERQELTLCPLCRDHITESLVVYS 63
            RIVQQQLAKEEQRLCV+CQENERSVLLLPCRHLCVCRGCSERQELTLCPLCRDHITESLVVYS
Sbjct:  127 RIVQQQLAKEEQRLCVVCQENERSVLLLPCRHLCVCRGCSERQELTLCPLCRDHITESLVVYS 189          
BLAST of mRNA_E-fasciculatus_F_contig1513.3640.1 vs. uniprot
Match: A0A482S6W3_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S6W3_9ARCH)

HSP 1 Score: 82.8 bits (203), Expect = 8.830e-19
Identity = 35/56 (62.50%), Postives = 45/56 (80.36%), Query Frame = 0
Query:    8 AKEEQRLCVICQENERSVLLLPCRHLCVCRGCSERQELTLCPLCRDHITESLVVYS 63
            A++EQRLCVICQENE++V+LLPCRHLC+C GCS    L +CPLCR+ I   + V+S
Sbjct:   82 AQKEQRLCVICQENEKTVVLLPCRHLCLCDGCSVHSALDMCPLCREAIVHKISVFS 137          
BLAST of mRNA_E-fasciculatus_F_contig1513.3640.1 vs. uniprot
Match: A0A7S2C4Y0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C4Y0_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.870e-17
Identity = 33/55 (60.00%), Postives = 44/55 (80.00%), Query Frame = 0
Query:    9 KEEQRLCVICQENERSVLLLPCRHLCVCRGCSERQELTLCPLCRDHITESLVVYS 63
            + +QRLCVICQENE++ LLLPCRHLC+C+ CS R+EL  CPLCR  I + + V++
Sbjct:  126 ERDQRLCVICQENEKNTLLLPCRHLCLCKECSRREELDKCPLCRKGIDQKIDVFA 180          
BLAST of mRNA_E-fasciculatus_F_contig1513.3640.1 vs. uniprot
Match: A0A7S2G914_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G914_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 5.610e-17
Identity = 36/64 (56.25%), Postives = 48/64 (75.00%), Query Frame = 0
Query:    1 RIVQQQLAKE-EQRLCVICQENERSVLLLPCRHLCVCRGCSERQELTLCPLCRDHITESLVVYS 63
            R++Q ++  E EQRLCV+CQE E+S L+LPCRHLC+C+ CS R EL  CPLCR  I + + VY+
Sbjct:  135 RLLQARVMNEREQRLCVVCQEREKSCLILPCRHLCLCKDCSRRSELKSCPLCRKPIEQKIDVYA 198          
BLAST of mRNA_E-fasciculatus_F_contig1513.3640.1 vs. uniprot
Match: A0A7S4DHZ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHZ0_HETAK)

HSP 1 Score: 79.0 bits (193), Expect = 1.160e-16
Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    1 RIVQQQLAK------EEQRLCVICQENERSVLLLPCRHLCVCRGCSERQELTLCPLCRDHITESLVVYS 63
            +I+++QL +      +EQ  CVICQEN +S+L+LPCRHLC+C+ CSE   L  CPLCR+ I E+L V+S
Sbjct:  132 KIIKEQLERASQNKSDEQNQCVICQENAKSILILPCRHLCLCQSCSENPRLKSCPLCRNDIKETLQVFS 200          
BLAST of mRNA_E-fasciculatus_F_contig1513.3640.1 vs. uniprot
Match: A0A482S078_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S078_9ARCH)

HSP 1 Score: 75.1 bits (183), Expect = 1.480e-16
Identity = 30/52 (57.69%), Postives = 41/52 (78.85%), Query Frame = 0
Query:   11 EQRLCVICQENERSVLLLPCRHLCVCRGCSERQELTLCPLCRDHITESLVVY 62
            +QRLC IC E++R+VLL+PCRHLC+C  CSE+  L LCP+CR+ I E + V+
Sbjct:   13 QQRLCTICMEDDRTVLLMPCRHLCLCSKCSEQSMLQLCPICRNRIQEKVTVF 64          
BLAST of mRNA_E-fasciculatus_F_contig1513.3640.1 vs. uniprot
Match: A0A7S3H223_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H223_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 3.050e-16
Identity = 32/55 (58.18%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    9 KEEQRLCVICQENERSVLLLPCRHLCVCRGCSERQELTLCPLCRDHITESLVVYS 63
            ++EQR+CV+CQE+E+SV+LLPCRHLCVC  CS    L +CPLCR+ I   + V+S
Sbjct:   80 QKEQRVCVVCQEHEKSVVLLPCRHLCVCDVCSTHDLLKMCPLCREPIAHKISVFS 134          
BLAST of mRNA_E-fasciculatus_F_contig1513.3640.1 vs. uniprot
Match: H3GYG0_PHYRM (RING-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GYG0_PHYRM)

HSP 1 Score: 79.3 bits (194), Expect = 9.030e-16
Identity = 34/55 (61.82%), Postives = 42/55 (76.36%), Query Frame = 0
Query:    9 KEEQRLCVICQENERSVLLLPCRHLCVCRGCSERQELTLCPLCRDHITESLVVYS 63
            + E +LCVIC  NE+S+L LPCRHLC+C+ CS RQE+T CP+CR  I E L VYS
Sbjct:  666 QNELKLCVICLSNEKSILCLPCRHLCLCKTCSSRQEVTKCPICRLEIEEMLAVYS 720          
BLAST of mRNA_E-fasciculatus_F_contig1513.3640.1 vs. uniprot
Match: M4BY57_HYAAE (RING-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BY57_HYAAE)

HSP 1 Score: 74.3 bits (181), Expect = 1.690e-15
Identity = 32/55 (58.18%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    9 KEEQRLCVICQENERSVLLLPCRHLCVCRGCSERQELTLCPLCRDHITESLVVYS 63
            + E +LCVIC  NE+ +L LPCRHLC+C  C+ RQE+T CP+CR  I E L VYS
Sbjct:   79 QNELKLCVICLANEKRILCLPCRHLCLCETCAYRQEVTKCPICRLEIAEVLAVYS 133          
BLAST of mRNA_E-fasciculatus_F_contig1513.3640.1 vs. uniprot
Match: A0A662Y4F7_9STRA (RING-type domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4F7_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 3.520e-15
Identity = 32/55 (58.18%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    9 KEEQRLCVICQENERSVLLLPCRHLCVCRGCSERQELTLCPLCRDHITESLVVYS 63
            + E +LCVIC  NE+S+L LPCRHLC+C  CS RQE+  CP+CR  I E L VY+
Sbjct:  165 QNELKLCVICLSNEKSILCLPCRHLCLCETCSRRQEVVKCPICRLEIEEMLAVYA 219          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1513.3640.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNM1_ECTSI4.180e-3798.41RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A482S6W3_9ARCH8.830e-1962.50RING-type domain-containing protein n=1 Tax=archae... [more]
A0A7S2C4Y0_9STRA3.870e-1760.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2G914_9STRA5.610e-1756.25Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4DHZ0_HETAK1.160e-1652.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A482S078_9ARCH1.480e-1657.69RING-type domain-containing protein n=1 Tax=archae... [more]
A0A7S3H223_9STRA3.050e-1658.18Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
H3GYG0_PHYRM9.030e-1661.82RING-type domain-containing protein n=1 Tax=Phytop... [more]
M4BY57_HYAAE1.690e-1558.18RING-type domain-containing protein n=1 Tax=Hyalop... [more]
A0A662Y4F7_9STRA3.520e-1558.18RING-type domain-containing protein n=1 Tax=Nothop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 15..51
e-value: 9.1E-4
score: 28.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 15..52
score: 10.763
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 12..57
e-value: 2.6E-14
score: 52.8
NoneNo IPR availablePANTHERPTHR22696RING FINGER PROTEIN 26 RNF26coord: 9..63
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 10..60
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 2..63
e-value: 2.8E-16
score: 60.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1513contigE-fasciculatus_F_contig1513:10994..11923 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1513.3640.1mRNA_E-fasciculatus_F_contig1513.3640.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1513 10774..11923 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1513.3640.1 ID=prot_E-fasciculatus_F_contig1513.3640.1|Name=mRNA_E-fasciculatus_F_contig1513.3640.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=64bp
RIVQQQLAKEEQRLCVICQENERSVLLLPCRHLCVCRGCSERQELTLCPL
CRDHITESLVVYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING