mRNA_E-fasciculatus_F_contig1513.3638.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1513.3638.1 vs. uniprot
Match: A0A6H5L6B0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6B0_9PHAE) HSP 1 Score: 536 bits (1380), Expect = 1.350e-186 Identity = 300/369 (81.30%), Postives = 312/369 (84.55%), Query Frame = 2
Query: 80 MRRRWLLCLLPLASRGGLAFVLPAAGPLHVAGGSTLLQ-VNAPCYWRSPIAVADPADATRAIARPSAAHQQRSPPLRMMAKNTPPTGKTNYRRPSAAIERGGGFFVPGLEGFKARFVLAVVILGLLGLEGFARPGMTVFQIVSKLLAGLAGVLLFGQALLDQQKERAFEVRREAIAAAPASAGGPGTDTAAGEGQVAFFDSVALGNDLEAKVMWAADIALQLTAACSFVMFSDGQVLARVGATGGELDASDTVAAAFKQATAAVVATAAAKTGEQDKGSPAAVVV-KKSDNGDDNDALMQLLPSACRQGVLCRVSCPSSGRGDGGGDVVVLLGSTVAGASVLSGMDGAWFERVCAFLALGPAAAGTGER 1180
MR LL LLPLASRGGLAFVLPAAGPLHVAG STL Q VNAPC WR PI ADPADATRAIARPSAAH+Q S LRMMAKNTPPTGKTNYRRPSAAIERGGGFFVPGLEGFKARFVL VVILGLL LEGFARPGMT+FQ++SKLLAGLAGVLLF QALLDQQKERAFE+RREAIAAAPASA GP TAAGEGQVAFFDS ALG+DLEAKVMWAADIALQLTAACSFVMFSDG+VLARVGATGGE DASDTVAAAFKQAT K+S NG DNDALMQLLPSACRQGVLC VS PSS G+GGGD+VVLLGST+AGA+VLSGMD AWFERVCAFLALGPAA G GER
Sbjct: 1 MRPSSLLYLLPLASRGGLAFVLPAAGPLHVAGSSTLFQKVNAPCSWRPPIP-ADPADATRAIARPSAAHRQHSNTLRMMAKNTPPTGKTNYRRPSAAIERGGGFFVPGLEGFKARFVLGVVILGLLSLEGFARPGMTIFQLISKLLAGLAGVLLFAQALLDQQKERAFEMRREAIAAAPASAQGPAMGTAAGEGQVAFFDSAALGSDLEAKVMWAADIALQLTAACSFVMFSDGEVLARVGATGGESDASDTVAAAFKQATXXXXXXXXXXXXXXXXXXXXXXXXXKRSANGGDNDALMQLLPSACRQGVLCTVSFPSSRHGEGGGDLVVLLGSTLAGATVLSGMDAAWFERVCAFLALGPAAVGAGER 368
BLAST of mRNA_E-fasciculatus_F_contig1513.3638.1 vs. uniprot
Match: A0A7S4B697_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B697_CHRCT) HSP 1 Score: 71.2 bits (173), Expect = 9.430e-10 Identity = 61/181 (33.70%), Postives = 84/181 (46.41%), Query Frame = 2
Query: 269 PSAAHQQRSPPLRMMAKNTPPTGKTNYRRPSAAIERGGGFFVPGLEGFKARFVLAVVILGLLGLEGFARPGMTVFQIVSKLLAGLAGVLLFGQALLDQQKERAFEVRREAIAAAPASAGGPGTDTAAGEGQVAFFDSVALGNDLEAKVM----WAADIALQLTAACSFVMFSDGQVLARVG 799
P+A RS P +AK P + Y+RP+AA+ERGGGF++PGLEG++ R ++ V+ L P +V Q VS+ L G + +LLF Q D+ E + RRE A S D L L+A+V W A L+L A VM DG+ L G
Sbjct: 82 PAAIRGVRSRPPLCLAK---PVKSSYYKRPAAALERGGGFYIPGLEGYRLRLLVGSVLSAALVANRITSPEPSVSQFVSEGLGGFSCLLLFIQVAADRAAEE--DDRRELARAIATSR---------------MEDRQQLAAQLDARVAEHAEWLARALLRLLPA-DVVMLLDGEALQTAG 241
BLAST of mRNA_E-fasciculatus_F_contig1513.3638.1 vs. uniprot
Match: A0A7S0LMB5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LMB5_9EUKA) HSP 1 Score: 67.8 bits (164), Expect = 1.010e-8 Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 2
Query: 308 MMAKNTPPTGKTNYRRPSAAIERGGGFFVPGLEGFKARFVLAVVILGLLGLEGFARPGMTVFQIVSKLLAGLAGVLLFGQALLDQQKE 571
MMA+ P + Y+RP+AA+ERGGGF+VPGLEG + R A V+ L L A G+T Q+VS++L A LLF Q D+ E
Sbjct: 77 MMARQ-PKVKSSYYKRPAAALERGGGFYVPGLEGNRLRLAAACVLSLALLLNRIASQGVTSSQLVSEVLGAAACALLFIQVFSDRLAE 163
BLAST of mRNA_E-fasciculatus_F_contig1513.3638.1 vs. uniprot
Match: A0A7S4RMV8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RMV8_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 1.780e-8 Identity = 39/83 (46.99%), Postives = 48/83 (57.83%), Query Frame = 2
Query: 347 YRRPSAAIERGGGFFVPGLEGFKARFVLAVVILGLLGLEGFARPGM---TVFQIVSKLLAGLAGVLLFGQALLDQQKERAFEV 586
Y RPSAAIERG GFFVPGLEG + R + +++L L + P T Q VS+ +A GVLL QA + KER F V
Sbjct: 38 YSRPSAAIERGSGFFVPGLEGSRVRILFGILVLILAFVNHVTAPLTELNTSGQSVSEAVAAFYGVLLLVQAFSEVGKERGFGV 120
BLAST of mRNA_E-fasciculatus_F_contig1513.3638.1 vs. uniprot
Match: A0A7S2KLI9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KLI9_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 2.360e-8 Identity = 57/154 (37.01%), Postives = 74/154 (48.05%), Query Frame = 2
Query: 347 YRRPSAAIERGGGFFVPGLEGFKARFVLAVVILGL-----LGLEGFARPGMTVFQIVSKLLAGLAGVLLFGQALLDQQKERAFEVRREAIAAAPASAGGPG----TDTAAGE-GQVAFFDSVALGNDLEAKVMWAADIALQLTAACSFVMFSDG 778
Y RPSAAIERG GF++PGLEG++ R + V IL L L L+ + Q VS +A L G+LL QAL+D KE F A SA G ++ GE QV D + + WAA + LT A SF++ G
Sbjct: 68 YSRPSAAIERGSGFYIPGLEGYRVRILSGVSILALSFINTLFLDTPVSETASSLQ-VSVNVANLFGLLLLLQALVDFGKETIFSTDYAAAQTTVKSAAGSNAVAKSNKIIGELQQVVSEDLTSAEKTYVKSIQWAAATFISLTPATSFLVVKRG 220
BLAST of mRNA_E-fasciculatus_F_contig1513.3638.1 vs. uniprot
Match: A0A7S0G9E4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G9E4_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 2.380e-8 Identity = 56/181 (30.94%), Postives = 90/181 (49.72%), Query Frame = 2
Query: 347 YRRPSAAIERGGGFFVPGLEGFKARFVLAVVILGLLGLE-GFARPGMTVFQIVSKLLAGLAGVLLFGQALLDQQKERAFEVRRE--AIAAAPASAGGPGTDTAAGEGQVAFFDSVALGNDLEAKVMWAADIALQLTAACSFVMFS-DGQVLARVGATGGELDASDTVAAAFKQATAAVVAT 877
Y RPSAAIE+G GF++PGLEG + R + ++ + L + A + Q +S+L+ + GVLL QAL++ KE F V + A++ G +D A+ G S + N + W A + LT A F+ D A++ + GG LD+ D+ K+A ++ + T
Sbjct: 8 YSRPSAAIEKGSGFYIPGLEGSRVRLLFGILAIALSYVNHNAATSAIGASQQLSELITSVFGVLLILQALIEFGKETGFGVSLDDGVRVNGIANSDGGASDKASTSGMAEII-SKDISNSETETLRWIAASYISLTPATHFLCLQRDDGSHAKIYSLGG-LDSGDSNNDGVKEAISSAITT 186
BLAST of mRNA_E-fasciculatus_F_contig1513.3638.1 vs. uniprot
Match: A0A7S0NXR1_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NXR1_9EUKA) HSP 1 Score: 65.5 bits (158), Expect = 5.340e-8 Identity = 44/113 (38.94%), Postives = 61/113 (53.98%), Query Frame = 2
Query: 260 IARPSAAHQQRSPPLRMMAKNTPPTGKTNY-RRPSAAIERGGGFFVPGLEGFKARFVLAVVILGLLGLEGFARPGMTVFQIVSKLLAGLAGVLLFGQALLDQQKERAFEVRRE 595
+ P+ H + PP+ M PP K Y +RP+AA+ERGGGF+VPGLEG + R +A V+ L + G+ Q+ S+ L A +L+F Q LD FE RRE
Sbjct: 44 VRAPAQPHARARPPVLMAP---PPKVKPGYYKRPAAAVERGGGFYVPGLEGSRLRLFVASVLSIALVVNHVFSAGVAPSQLGSEALGSCACLLIFVQVALDN-----FEERRE 148
BLAST of mRNA_E-fasciculatus_F_contig1513.3638.1 vs. uniprot
Match: W7TJU1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJU1_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 6.840e-8 Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 2
Query: 347 YRRPSAAIERGGGFFVPGLEGFKARFVLAVVILGLLGLEGFARPGMT--VFQIVSKLLAGLAGVLLFGQALLDQ 562
Y+RPS AIE GGGFF+PGLEG+K R A+++L LL L + PG T Q+ S+ + A V+L QAL+++
Sbjct: 78 YKRPSKAIEMGGGFFIPGLEGYKLRLATALLVLLLLALNRY--PGYTPAASQLTSEAIGAGAAVILLAQALIEK 149
BLAST of mRNA_E-fasciculatus_F_contig1513.3638.1 vs. uniprot
Match: A0A7S4IK78_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IK78_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.610e-7 Identity = 57/172 (33.14%), Postives = 86/172 (50.00%), Query Frame = 2
Query: 269 PSAAHQQRSPPLRMMAKNTPPTGKTN----YRRPSAAIERGGGFFVPGLEGFKARFVLAVVILGLLGLEGFARPGMTVF---QIVSKLLAGLAGVLLFGQALLDQQKERAFEVRREAIAAAPASAGGPGTDTAAGEG----QVAFFDSVALGNDLEAKVMWAADIALQLTAA 751
P+ ++ RS LRM + + K+ Y RPSAAIERG GFF+PGLEG + R + ++L L + + + Q +S+ +A + G+LL QA ++ KE F V + AA+ GP TA+G Q+ D ++ +A V WAA + LT A
Sbjct: 80 PAVVYRPRSVALRMSSPSGDGKKKSKTSGVYARPSAAIERGSGFFIPGLEGSRVRLLFGAIVLVLTYVNRMSNEVGAMISEAQFLSETVAVVYGLLLLLQAAVEFGKELGFGVE-DPSAASMGVESGPAATTASGPSASVSQIISPDLASMDRVADA-VRWAAATFVALTPA 249
BLAST of mRNA_E-fasciculatus_F_contig1513.3638.1 vs. uniprot
Match: A0A7S1ZUJ8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZUJ8_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 3.020e-7 Identity = 39/83 (46.99%), Postives = 48/83 (57.83%), Query Frame = 2
Query: 347 YRRPSAAIERGGGFFVPGLEGFKARFVLAVVILGLLGLEGFARPGM---TVFQIVSKLLAGLAGVLLFGQALLDQQKERAFEV 586
Y RPSAAIERG GFFVPGLEG + R + +++L L + P T Q VS+ +A GVLL QA + KER F V
Sbjct: 143 YSRPSAAIERGSGFFVPGLEGSRVRILFGILVLILAFVNHVTAPLTELNTSGQSVSEAVAAFYGVLLLVQAFSEVGKERGFGV 225 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1513.3638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1513.3638.1 >prot_E-fasciculatus_F_contig1513.3638.1 ID=prot_E-fasciculatus_F_contig1513.3638.1|Name=mRNA_E-fasciculatus_F_contig1513.3638.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=368bp MRRRWLLCLLPLASRGGLAFVLPAAGPLHVAGGSTLLQVNAPCYWRSPIAback to top mRNA from alignment at E-fasciculatus_F_contig1513:568..4005- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1513.3638.1 ID=mRNA_E-fasciculatus_F_contig1513.3638.1|Name=mRNA_E-fasciculatus_F_contig1513.3638.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3438bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1513:568..4005- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1513:568..4005- >mRNA_E-fasciculatus_F_contig1513.3638.1 ID=mRNA_E-fasciculatus_F_contig1513.3638.1|Name=mRNA_E-fasciculatus_F_contig1513.3638.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2208bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1513:568..4005- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |