mRNA_E-fasciculatus_F_contig15128.3636.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig15128.3636.1
Unique NamemRNA_E-fasciculatus_F_contig15128.3636.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig15128.3636.1 vs. uniprot
Match: D8LBU4_ECTSI (Carboxypeptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBU4_ECTSI)

HSP 1 Score: 357 bits (916), Expect = 1.730e-120
Identity = 169/180 (93.89%), Postives = 172/180 (95.56%), Query Frame = 1
Query:    1 LQDEGATDKEYFFWMAESQDSPSEDPVILWLTGGPGCSSTLALLAENGPCTVNEDGETTTPNPSSWNRRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFVAHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNQEGYSLINLQGMGIGNGLTSPAIQYPFYTQVGV 540
            +QDEGATDKEYFFWMAESQDSPSEDP+ILWLTGGPGCSSTLALLAENGPCTVNEDGETT PNPSSWN RANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFF  HPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKN EG S INLQGMGIGNGLTSPAIQYPFYTQ+ V
Sbjct:   49 IQDEGATDKEYFFWMAESQDSPSEDPLILWLTGGPGCSSTLALLAENGPCTVNEDGETTMPNPSSWNSRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFATHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNGEG-SAINLQGMGIGNGLTSPAIQYPFYTQMAV 227          
BLAST of mRNA_E-fasciculatus_F_contig15128.3636.1 vs. uniprot
Match: A0A7S3M081_9STRA (Carboxypeptidase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M081_9STRA)

HSP 1 Score: 238 bits (607), Expect = 2.040e-74
Identity = 111/178 (62.36%), Postives = 136/178 (76.40%), Query Frame = 1
Query:    7 DEGATDKEYFFWMAESQDSPSEDPVILWLTGGPGCSSTLALLAENGPCTVNEDGETTTPNPSSWNRRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFVAHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNQEGYSLINLQGMGIGNGLTSPAIQYPFYTQVGV 540
            DE + DK YFFW  ES+  PS DP+++WLTGGPGCSS LALL ENGPC V+EDG +T  NP SWN  +N++W+DQPAGVG+SYG      D  E AVGEDM+ FLQEFF AHPEY SN F+VFGESYGGHYAP++A R++QG  N+EG   INL G+G+GNGLT P IQY +Y ++ +
Sbjct:    8 DEASLDKNYFFWFFESRSKPSTDPLVIWLTGGPGCSSQLALLTENGPCKVSEDGLSTYNNPYSWNSNSNIMWIDQPAGVGYSYGTKN---DKDEAAVGEDMYQFLQEFFTAHPEYVSNHFFVFGESYGGHYAPAIASRIFQGNNNKEGIH-INLSGVGVGNGLTDPVIQYQYYPEMAM 181          
BLAST of mRNA_E-fasciculatus_F_contig15128.3636.1 vs. uniprot
Match: A0A6S9GAZ6_HETAK (Carboxypeptidase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GAZ6_HETAK)

HSP 1 Score: 239 bits (610), Expect = 2.400e-74
Identity = 112/178 (62.92%), Postives = 141/178 (79.21%), Query Frame = 1
Query:   10 EGATDKEYFFWMAESQDSPSEDPVILWLTGGPGCSSTLALLAENGPCTVNEDGETTTPNPSSWNRRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFVAHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNQEGYSL-INLQGMGIGNGLTSPAIQYPFYTQVGV 540
            +G+ +K YFFW  ES+DSPS DP+I+WLTGGPGCSS LALLAENGPCTVNEDG +TT NP SWN  AN++WVDQPAGVGFSYG A  D+D  E  VGEDM+ F++EF   +P+YA+  FYVFGESYGGHY P+V+ R+++G  NQEG    +NL+G+GIGNGLT+P +Q+ +Y  + V
Sbjct:   64 DGSVNKNYFFWFFESRDSPSTDPLIIWLTGGPGCSSILALLAENGPCTVNEDGASTTVNPFSWNSHANIMWVDQPAGVGFSYGAAS-DYDRNEAEVGEDMYHFVKEFLAQYPQYAAQDFYVFGESYGGHYVPAVSSRIYRG--NQEGDGAPVNLKGIGIGNGLTNPLVQFEYYADMAV 238          
BLAST of mRNA_E-fasciculatus_F_contig15128.3636.1 vs. uniprot
Match: A0A8K1FCT1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCT1_PYTOL)

HSP 1 Score: 232 bits (591), Expect = 2.530e-71
Identity = 109/172 (63.37%), Postives = 130/172 (75.58%), Query Frame = 1
Query:   10 EGATDKEYFFWMAESQDSPSEDPVILWLTGGPGCSSTLALLAENGPCTVNEDGETTTPNPSSWNRRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFVAHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNQEGYSLINLQGMGIGNGLTSPAIQYPFY 525
            +G+  K YF+W  ES+ +PS DPVI+WLTGGPGCSS LAL  ENGPCT+N+D  T   NP SWN RAN++W+DQP GVGFSYG    ++D  E  VG+DMF FLQ FF AHPEY    FYVFGESYGGHY P+VAHRV++G  N+EG   INLQG GIGNGLT+P +QY +Y
Sbjct:   58 DGSKSKNYFYWFFESRGNPSTDPVIIWLTGGPGCSSILALFVENGPCTINDD-MTLKSNPFSWNERANIMWIDQPVGVGFSYGDKS-EYDSSEKEVGDDMFHFLQSFFKAHPEYQKQDFYVFGESYGGHYVPAVAHRVFEGNNNKEGLH-INLQGFGIGNGLTNPQVQYKYY 226          
BLAST of mRNA_E-fasciculatus_F_contig15128.3636.1 vs. uniprot
Match: A0A662WIK1_9STRA (Carboxypeptidase (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIK1_9STRA)

HSP 1 Score: 224 bits (572), Expect = 2.670e-71
Identity = 104/172 (60.47%), Postives = 129/172 (75.00%), Query Frame = 1
Query:   10 EGATDKEYFFWMAESQDSPSEDPVILWLTGGPGCSSTLALLAENGPCTVNEDGETTTPNPSSWNRRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFVAHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNQEGYSLINLQGMGIGNGLTSPAIQYPFY 525
            +G+  K YF+W  ES+ +PS DPV++WLTGGPGCSS LALL ENGPC+VN+D  +   NP SWN RANV+W+DQP GVGFSYG    ++D  E  VG+DMF FLQEFF A PEY   PF+VFGESY GHY P+++HR++ G + +EG   INLQG GIGNGLT P +QY +Y
Sbjct:   62 DGSKSKNYFYWFFESRGTPSTDPVVIWLTGGPGCSSILALLQENGPCSVNDD-LSLKRNPFSWNERANVMWIDQPVGVGFSYGDVS-EYDTDETQVGDDMFHFLQEFFQARPEYQKQPFFVFGESYAGHYVPAISHRIFTGNQKEEGPVHINLQGFGIGNGLTDPEVQYKYY 231          
BLAST of mRNA_E-fasciculatus_F_contig15128.3636.1 vs. uniprot
Match: K3XCD6_GLOUD (Carboxypeptidase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XCD6_GLOUD)

HSP 1 Score: 231 bits (588), Expect = 8.430e-71
Identity = 110/174 (63.22%), Postives = 133/174 (76.44%), Query Frame = 1
Query:   13 GATDKEYFFWMAESQDSPSEDPVILWLTGGPGCSSTLALLAENGPCTVNEDGETTTPNPSSWNRRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFVAHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNQEGYSLINLQGMGIGNGLTSPAIQYPFYTQV 534
            G+  K YF+W  ES+ +PS DP+I+WLTGGPGCSSTLALL ENGPC+VN+D  T   NP SWN RAN++WVDQP GVGFSYG    ++D  E  VG+DMF FLQEFF AHPEY    FYVFGESY GHY P++AHRV+ G +N+EG   INLQG GIGNGLT+P +QY +Y ++
Sbjct:   64 GSKSKNYFYWFFESRGTPSIDPLIIWLTGGPGCSSTLALLEENGPCSVNDD-LTLKRNPFSWNERANIMWVDQPIGVGFSYGDKS-EYDTSEKEVGDDMFQFLQEFFAAHPEYQKQEFYVFGESYAGHYVPAIAHRVFTGNQNKEGLH-INLQGFGIGNGLTNPQVQYKYYPEM 234          
BLAST of mRNA_E-fasciculatus_F_contig15128.3636.1 vs. uniprot
Match: A0A0A7CM09_9STRA (Carboxypeptidase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A0A7CM09_9STRA)

HSP 1 Score: 230 bits (586), Expect = 1.380e-70
Identity = 110/176 (62.50%), Postives = 137/176 (77.84%), Query Frame = 1
Query:   10 EGATDKEYFFWMAESQDSPSEDPVILWLTGGPGCSSTLALLAENGPCTVNEDGETTTPNPSSWNRRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFVAHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNQEG-YSLINLQGMGIGNGLTSPAIQYPFYTQV 534
            +G+  K YFFW  ES+ +P +DPVI+WLTGGPGCSS LALL ENGPC+VN+D    + NP SWN +ANV+W+DQPAGVGFSYG A  ++D  E  VG DM+ FLQEFF AHPEYA N FYVFGESY GHY P+VAHR++ G  N EG  +LIN++G+GIGNGLT+P +QY +Y ++
Sbjct:   59 DGSKSKNYFFWFFESRGNPKDDPVIIWLTGGPGCSSMLALLGENGPCSVNDDLSLKS-NPYSWNEKANVMWIDQPAGVGFSYGDAS-EYDTDETMVGNDMYHFLQEFFQAHPEYAKNAFYVFGESYAGHYVPAVAHRIYTG--NMEGGKALINMKGIGIGNGLTAPEVQYKYYPEM 230          
BLAST of mRNA_E-fasciculatus_F_contig15128.3636.1 vs. uniprot
Match: A0A067D239_SAPPC (Carboxypeptidase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D239_SAPPC)

HSP 1 Score: 230 bits (586), Expect = 1.560e-70
Identity = 110/176 (62.50%), Postives = 137/176 (77.84%), Query Frame = 1
Query:   10 EGATDKEYFFWMAESQDSPSEDPVILWLTGGPGCSSTLALLAENGPCTVNEDGETTTPNPSSWNRRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFVAHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNQEGYS-LINLQGMGIGNGLTSPAIQYPFYTQV 534
            +G+  K YF+W  ES+D+P +DPVI+WLTGGPGCSS LALL ENGPC+VN+D  +   NP SWN +AN++W+DQPAGVGFSYG    ++D  E  VG DM+ FLQ FF AHPEYASN FYVFGESY GHY P+VAHR++ G  N+EG S  INL+G+GIGNGLTSP +QY +Y ++
Sbjct:   59 DGSKSKNYFYWFFESRDAPKDDPVIIWLTGGPGCSSMLALLGENGPCSVNDD-LSLKRNPYSWNAKANIMWIDQPAGVGFSYGDKS-EYDTDETMVGNDMYHFLQAFFAAHPEYASNAFYVFGESYAGHYVPAVAHRIYSG--NKEGSSPKINLKGIGIGNGLTSPEVQYQYYPEM 230          
BLAST of mRNA_E-fasciculatus_F_contig15128.3636.1 vs. uniprot
Match: A0A3F2RTS6_9STRA (Carboxypeptidase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RTS6_9STRA)

HSP 1 Score: 228 bits (581), Expect = 9.370e-70
Identity = 108/172 (62.79%), Postives = 129/172 (75.00%), Query Frame = 1
Query:   10 EGATDKEYFFWMAESQDSPSEDPVILWLTGGPGCSSTLALLAENGPCTVNEDGETTTPNPSSWNRRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFVAHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNQEGYSLINLQGMGIGNGLTSPAIQYPFY 525
            +G+  K YF+W  ES+ SPS DPVI+WLTGGPGCSS LALL ENGPC+VN+D  +   NP SWN RANV+W+DQP GVGFSYG    ++D  E  VG+DMF FLQEFF A PEY   PFYVFGESY GHY P++AHR++ G + +EG   INLQG GIGNGLT P +QY +Y
Sbjct:   57 DGSKSKNYFYWFFESRGSPSTDPVIIWLTGGPGCSSILALLQENGPCSVNDD-LSLKRNPYSWNERANVMWIDQPVGVGFSYGDVS-EYDTTEKEVGDDMFHFLQEFFQARPEYQKQPFYVFGESYAGHYVPAIAHRIFTGNQQKEGPVHINLQGFGIGNGLTDPEVQYKYY 226          
BLAST of mRNA_E-fasciculatus_F_contig15128.3636.1 vs. uniprot
Match: M4BN16_HYAAE (Carboxypeptidase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN16_HYAAE)

HSP 1 Score: 226 bits (577), Expect = 1.480e-69
Identity = 108/171 (63.16%), Postives = 128/171 (74.85%), Query Frame = 1
Query:   13 GATDKEYFFWMAESQDSPSEDPVILWLTGGPGCSSTLALLAENGPCTVNEDGETTTPNPSSWNRRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVGEDMFWFLQEFFVAHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNQEGYSLINLQGMGIGNGLTSPAIQYPFY 525
            G+  K YF+W  ES+ SPS DP+I+WLTGGPGCSS LALL ENGPC+VN D  +   NP SW  RANVIW+DQP GVGFSYG    ++D  E  VG+DMF FLQEFF A PEY + PFYVFGESY GHY P++AHR+++G + QEG   INLQG GIGNGLT P +QY +Y
Sbjct:   23 GSKSKNYFYWFFESRGSPSTDPLIIWLTGGPGCSSILALLQENGPCSVNTD-LSLKRNPFSWTDRANVIWIDQPVGVGFSYGDVS-EYDTTEKEVGDDMFHFLQEFFQAKPEYQAQPFYVFGESYAGHYVPAIAHRIFEGNQKQEGPVQINLQGFGIGNGLTDPEVQYKYY 191          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15128.3636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBU4_ECTSI1.730e-12093.89Carboxypeptidase n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A7S3M081_9STRA2.040e-7462.36Carboxypeptidase n=1 Tax=Spumella elongata TaxID=8... [more]
A0A6S9GAZ6_HETAK2.400e-7462.92Carboxypeptidase n=1 Tax=Heterosigma akashiwo TaxI... [more]
A0A8K1FCT1_PYTOL2.530e-7163.37Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662WIK1_9STRA2.670e-7160.47Carboxypeptidase (Fragment) n=1 Tax=Nothophytophth... [more]
K3XCD6_GLOUD8.430e-7163.22Carboxypeptidase n=1 Tax=Globisporangium ultimum (... [more]
A0A0A7CM09_9STRA1.380e-7062.50Carboxypeptidase n=1 Tax=Thraustotheca clavata Tax... [more]
A0A067D239_SAPPC1.560e-7062.50Carboxypeptidase n=2 Tax=Saprolegnia TaxID=4769 Re... [more]
A0A3F2RTS6_9STRA9.370e-7062.79Carboxypeptidase n=3 Tax=Phytophthora kernoviae Ta... [more]
M4BN16_HYAAE1.480e-6963.16Carboxypeptidase n=1 Tax=Hyaloperonospora arabidop... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15128contigE-fasciculatus_F_contig15128:384..2870 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score359.4
Seed ortholog evalue9.9e-97
Seed eggNOG ortholog2880.D8LBU4
KEGG koko:K09645,ko:K13289,ko:K16298
KEGG Pathwayko04142,ko04614,map04142,map04614
EggNOG free text desc.PFAM Peptidase S10, serine carboxypeptidase
EggNOG OGsCOG2939@1,KOG1282@2759
EC3.4.16.5
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko03110,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSerine Carboxypeptidase
Ec32 orthologEc-27_002670.1
Exons4
Model size540
Cds size540
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15128.3636.1prot_E-fasciculatus_F_contig15128.3636.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig15128 384..2870 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927993.9877348-CDS-E-fasciculatus_F_contig15128:383..4861622927993.9877348-CDS-E-fasciculatus_F_contig15128:383..486Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15128 384..486 -
1695995781.360306-CDS-E-fasciculatus_F_contig15128:383..4861695995781.360306-CDS-E-fasciculatus_F_contig15128:383..486Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15128 384..486 -
1622927993.9997966-CDS-E-fasciculatus_F_contig15128:1132..12551622927993.9997966-CDS-E-fasciculatus_F_contig15128:1132..1255Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15128 1133..1255 -
1695995781.3726017-CDS-E-fasciculatus_F_contig15128:1132..12551695995781.3726017-CDS-E-fasciculatus_F_contig15128:1132..1255Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15128 1133..1255 -
1622927994.0133507-CDS-E-fasciculatus_F_contig15128:1596..17681622927994.0133507-CDS-E-fasciculatus_F_contig15128:1596..1768Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15128 1597..1768 -
1695995781.3822596-CDS-E-fasciculatus_F_contig15128:1596..17681695995781.3822596-CDS-E-fasciculatus_F_contig15128:1596..1768Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15128 1597..1768 -
1622927994.029838-CDS-E-fasciculatus_F_contig15128:2728..28701622927994.029838-CDS-E-fasciculatus_F_contig15128:2728..2870Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15128 2729..2870 -
1695995781.392001-CDS-E-fasciculatus_F_contig15128:2728..28701695995781.392001-CDS-E-fasciculatus_F_contig15128:2728..2870Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15128 2729..2870 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig15128.3636.1

>prot_E-fasciculatus_F_contig15128.3636.1 ID=prot_E-fasciculatus_F_contig15128.3636.1|Name=mRNA_E-fasciculatus_F_contig15128.3636.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=180bp
LQDEGATDKEYFFWMAESQDSPSEDPVILWLTGGPGCSSTLALLAENGPC
TVNEDGETTTPNPSSWNRRANVIWVDQPAGVGFSYGKAPGDFDHGEDAVG
EDMFWFLQEFFVAHPEYASNPFYVFGESYGGHYAPSVAHRVWQGIKNQEG
YSLINLQGMGIGNGLTSPAIQYPFYTQVGV
back to top

mRNA from alignment at E-fasciculatus_F_contig15128:384..2870-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig15128.3636.1 ID=mRNA_E-fasciculatus_F_contig15128.3636.1|Name=mRNA_E-fasciculatus_F_contig15128.3636.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2487bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15128:384..2870- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTTCAGGACGAGGGCGCGACGGATAAGGAGTACTTCTTCTGGATGGCGGA GTCCCAGGATAGCCCTAGCGAGGACCCGGTCATCCTCTGGCTCACGGGCG GCCCCGGGTGCTCTTCGACGCTGGCCCTCCTGGCCGAGAACGGTGCGATG CTGGTGTGATGTTGAATTGATTGATACGAAGTGCAAGCAGGCGGGGCTTT CATGTCGGAGGAGAGGGCGTGGGCGATGTGTCGGGGTGGGTTGGCGAAGT CAACACGCCTGTTTCTCCCCACCTACTTCCTCTGGAATTGATTGAAGCGA AGAATTTTCAAAACAGGGAGGAAGGCCTACCATCGGAGCTATGGCAAGGG AGAAGAGGGGTCACCTTTACCTTTCGTCGTCTCTAGGCAGGTGACCCCCG GTTCTGACGGGGGCAAGAAGAACTACAGTGAACCCTTGTGGACATCCACC TGTTTCGATATCGAGATTACTTCGGCCGAGACTGTTTCAGAGCATGCCGA GGAGATCAAGGAGGGTGGCGAGGCGAAGGAACTCTCGGAGGAGAAGGTCA TGACGTTCTCTTCCGATAAATCCTTCGCCTCGCCACCCTTCTTGATCTCA TCAGCATGCTCTGCCGCTCCTGTGCTTTGGCGTGACTCTGCACCGTTAGC TGTGCTTTCTTGACCTCGGAACGAAGCGAGGCCTACTACACAATTGCCAG AACCTGTTTCAAGCAGAAACGAAGCCTTAAAGTTACATACAACCAAATAG ACGGTGCAGGATGTTGGTCTTGGTCTACTGCCACCTACCTCCCCACACGA TATCACGATATCACGATATCACGATATCAATCCCGACCTCACCCAAGTCT AATCCAAGCAACACTTTACCACACGCCATGGTAGCCGCCAACCTGGCTAT GCCAAACGAAACGAAGCGTATCAAACCGAGAGGTAGCGTATGAAGTATGA AAACCTGGCGTAACCAACCACGCCAAACCAAACCAAACGCAACGCATCGT TACGAAACGAAACCAAACCAAACCAAACCAAACCTAGAACGAACCGAAAC GTAAGTGTACCGACGTAAATAAACTAAACAATGCGAACCGCAACCATGAC AGGCCCGTGCACGGTCAACGAGGACGGCGAGACGACGACGCCCAACCCCA GCTCGTGGAACAGGCGGGCAAACGTGATCTGGGTAGACCAGCCGGCGGGC GTAGGGTTCAGCTACGGCAAGGCCCCCGGAGACTTCGACCATGGGGAGGA CGCGGTCGGGGAGGACATGTTCTGGTGAGGGAGACAAGACAAGACTGGAG GGAGAAGGAGAAGGAGGTTGTAGGGGAAACAGTGGCGTGTAGGGAAGGCA AGGTGTGGTTGAAGACCATGAACTCTGCTGTAAAACGAGGGGAAGAGGTG CGATCGAGATTGATTCAAGTGTTAGTAGAACAGCTGGGAGAACAGAGGAC GAACGCTACCATGTGCGCCTGCGGTCTAAGGAGGACGTACTGATAGCACG GAACGTATTTTTGGGTGATCCTATGTGCTCTGTCCTCGTTCCACCACTGC CCGTTTGCCCTGACTCCAATGTCTCAACCCCTCCCTCTATCTGTCTACTC CGTCCGCCCCCCTAGGTTCCTTCAGGAGTTTTTCGTGGCGCACCCCGAAT ACGCGTCCAACCCGTTTTATGTGTTCGGCGAGTCGTACGGGGGTCACTAC GCCCCGTCGGTGGCACACAGGGTGTGGCAAGGAATCAAGTGAGTTGAGTT GAGTTGAGAATGGAGGGTGCTACTTGTATTCGCTTTGAGTCTTTGAGTTG CGTGTTCTTGCACACGCACCACCATTGGAGGGAGGTTGGACTACGGTCGG GGTGGGATGTGGAGCCTTGGACAGAGAGTTTCTCCTGCGAGAGGTGTTCT TCGAGTCTCGAAAGCTTGACATGAATAATAATGTTGTCCTCTCTTTTCTC ATCACCCCTCTTGGTTGCTTTTCTTCCACACGATTTTCTCTTGCGTTTGT TTCCTGCGTTCCTTTTACGTCTCTATCTCTTGTCTCTGTGTATATCCCGT CCTACTCATATCTCCTTACCACGGCTTGTCGCGCTATGCTATCTGCGCCT CCAAGCATTGGAATCGAGTATATTCAAGCTGCCCTTTGCTGCACAGCCAC GAAAAAAATATGATTCTCGTGGTTGGGACCGATCCGTTGCATTTAGCACT TTGACGCCCTCCCCTGGTCGTCCCCCTTTGCTTCCCTCTATTCCTTGTGT TCGGCGGCCGGTGCACGCCCACGACCTTTTGCTGCACCCACTTCCTCGCC ACCGCTGTCTGTCTGACCCAGCCGCCTGCCGGTCGAATCCCAATGCCTGT AATGCTACCGTTGGCGCTACCATTGACGACGCAGGAACCAGGAGGGTTAT TCCTTGATCAATCTTCAGGGGATGGGCATCGGAAACGGCCTCACGTCTCC CGCGATACAGTACCCTTTCTACACTCAGGTGGGTGTT
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15128:384..2870-

>mRNA_E-fasciculatus_F_contig15128.3636.1 ID=mRNA_E-fasciculatus_F_contig15128.3636.1|Name=mRNA_E-fasciculatus_F_contig15128.3636.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1080bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15128:384..2870- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTTCAGGACGAGGGCGCGACGGATAAGGAGTACTTCTTCTGGATGGCGGA
GTCCCAGGATAGCCCTAGCGAGGACCCGGTCATCCTCTGGCTCACGGGCG
GCCCCGGGTGCTCTTCGACGCTGGCCCTCCTGGCCGAGAACGCTTCAGGA
CGAGGGCGCGACGGATAAGGAGTACTTCTTCTGGATGGCGGAGTCCCAGG
ATAGCCCTAGCGAGGACCCGGTCATCCTCTGGCTCACGGGCGGCCCCGGG
TGCTCTTCGACGCTGGCCCTCCTGGCCGAGAACGGCCCGTGCACGGTCAA
CGAGGACGGCGAGACGACGACGCCCAACCCCAGCTCGTGGAACAGGCGGG
CAAACGTGATCTGGGTAGACCAGCCGGCGGGCGTAGGGTTCAGCTACGGC
AAGGCCCCCGGAGACTTCGACCATGGGGAGGACGCGGTCGGGGAGGACAT
GTTCTGGCCCGTGCACGGTCAACGAGGACGGCGAGACGACGACGCCCAAC
CCCAGCTCGTGGAACAGGCGGGCAAACGTGATCTGGGTAGACCAGCCGGC
GGGCGTAGGGTTCAGCTACGGCAAGGCCCCCGGAGACTTCGACCATGGGG
AGGACGCGGTCGGGGAGGACATGTTCTGGTTCCTTCAGGAGTTTTTCGTG
GCGCACCCCGAATACGCGTCCAACCCGTTTTATGTGTTCGGCGAGTCGTA
CGGGGGTCACTACGCCCCGTCGGTGGCACACAGGGTGTGGCAAGGAATCA
AGTTCCTTCAGGAGTTTTTCGTGGCGCACCCCGAATACGCGTCCAACCCG
TTTTATGTGTTCGGCGAGTCGTACGGGGGTCACTACGCCCCGTCGGTGGC
ACACAGGGTGTGGCAAGGAATCAAGAACCAGGAGGGTTATTCCTTGATCA
ATCTTCAGGGGATGGGCATCGGAAACGGCCTCACGTCTCCCGCGATACAG
TACCCTTTCTACACTCAGGTGGGTGTTGAACCAGGAGGGTTATTCCTTGA
TCAATCTTCAGGGGATGGGCATCGGAAACGGCCTCACGTCTCCCGCGATA
CAGTACCCTTTCTACACTCAGGTGGGTGTT
back to top