mRNA_E-fasciculatus_F_contig15125.3634.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15125.3634.1 vs. uniprot
Match: A0A6H5KG36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG36_9PHAE) HSP 1 Score: 220 bits (561), Expect = 1.110e-64 Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 1
Query: 4 NQPFTRLFCADCGECFHRWCLPSNIVPLDKKALAAWRCPNCKVCEVCTETAKSDESLLLMCELCDRAYHTYCLTPSTDKPPEGTWICGQCISCTTC 291
NQPFTRLFCADCGECFHRWCLPSNIVPLDKKALA+WRCPNCKVCEVCTETAKSDESLLLMCELCDRAYHTYCLTPSTDKPPEGTWICGQCISCTTC
Sbjct: 1843 NQPFTRLFCADCGECFHRWCLPSNIVPLDKKALASWRCPNCKVCEVCTETAKSDESLLLMCELCDRAYHTYCLTPSTDKPPEGTWICGQCISCTTC 1938
BLAST of mRNA_E-fasciculatus_F_contig15125.3634.1 vs. uniprot
Match: D8LHU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU3_ECTSI) HSP 1 Score: 130 bits (326), Expect = 5.330e-33 Identity = 60/75 (80.00%), Postives = 63/75 (84.00%), Query Frame = 1
Query: 67 PSNIVPLDKKALAAWRCPNCKVCEVCTETAKSDESLLLMCELCDRAYHTYCLTPSTDKPPEGTWICGQCISCTTC 291
P V L ++ +AAW VCEVCTETAKSDESLLLMCELCDRAYHTYCLTPSTDKPPEGTWICGQCISCTTC
Sbjct: 1396 PDAAVGLQRQPIAAW------VCEVCTETAKSDESLLLMCELCDRAYHTYCLTPSTDKPPEGTWICGQCISCTTC 1464
BLAST of mRNA_E-fasciculatus_F_contig15125.3634.1 vs. uniprot
Match: F0YDE9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDE9_AURAN) HSP 1 Score: 116 bits (291), Expect = 4.260e-30 Identity = 49/90 (54.44%), Postives = 58/90 (64.44%), Query Frame = 1
Query: 22 LFCADCGECFHRWCLPSNIVPLDKKALAAWRCPNCKVCEVCTETAKSDESLLLMCELCDRAYHTYCLTPSTDKPPEGTWICGQCISCTTC 291
LFC DCGE H C + I + A A WRCPNCKVCE+C E+ DES LL C+LCD+AYH C+TP D P G WICG C++C C
Sbjct: 72 LFCVDCGEACHAMCASTPIDSMSDAARATWRCPNCKVCELCGESKVDDESRLLYCDLCDKAYHLDCVTPKLDVAPPGRWICGLCVTCRHC 161
BLAST of mRNA_E-fasciculatus_F_contig15125.3634.1 vs. uniprot
Match: A0A3R6Z0X4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Z0X4_9STRA) HSP 1 Score: 110 bits (275), Expect = 4.030e-26 Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 1
Query: 4 NQPFTRLFCADCGECFHRWCLPSNIVPLDK-----KALAAWRCPNCKVCEVCTETAKSDESLLLMCELCDRAYHTYCLTPSTDKPPEGTWICGQCISCTTC 291
QP + +FC DCGE FH +CL + L+ K L WRCPNCK+CE C + DE+ LL+C++C+R +HT+CL P + P G ++CG C+ C TC
Sbjct: 681 GQPQSMIFCVDCGEVFHTFCLQPALDILEHTKHNDKILEYWRCPNCKICEFCGRCNQEDEAKLLVCDVCERGFHTFCLKPRLREVPSGGFVCGSCVQCETC 781
BLAST of mRNA_E-fasciculatus_F_contig15125.3634.1 vs. uniprot
Match: A0A024U111_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U111_9STRA) HSP 1 Score: 110 bits (275), Expect = 4.060e-26 Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 1
Query: 4 NQPFTRLFCADCGECFHRWCLPSNIVPLDK-----KALAAWRCPNCKVCEVCTETAKSDESLLLMCELCDRAYHTYCLTPSTDKPPEGTWICGQCISCTTC 291
QP + +FC DCGE FH +CL + L+ K L WRCPNCK+CE C + DE+ LL+C++C+R +HT+CL P + P G ++CG C+ C TC
Sbjct: 1105 GQPQSMIFCVDCGEVFHTFCLQPALDILEHTKHNDKILEYWRCPNCKICEFCGRCNQEDEAKLLVCDVCERGFHTFCLKPRLREVPSGGFVCGSCVQCETC 1205
BLAST of mRNA_E-fasciculatus_F_contig15125.3634.1 vs. uniprot
Match: A0A448ZD18_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZD18_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.020e-25 Identity = 44/92 (47.83%), Postives = 62/92 (67.39%), Query Frame = 1
Query: 16 TRLFCADCGECFHRWCLPSNIVPLDKKALAAWRCPNCKVCEVCTETAKSDESLLLMCELCDRAYHTYCLTPSTDKPPEGTWICGQCISCTTC 291
T +FC DCGE FH +C+ + I +D ++AAWRCPNCK+CE+ ++ + DE+ +L CE+CDR ++ L P K P G WICGQC+ C C
Sbjct: 949 TMIFCVDCGEGFHSFCVNAPIHSMDASSVAAWRCPNCKICEISGDSPE-DETKMLFCEMCDRGFNLDLLDPPLSKAPSGIWICGQCVDCRKC 1039
BLAST of mRNA_E-fasciculatus_F_contig15125.3634.1 vs. uniprot
Match: A0A6V0AXK7_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6V0AXK7_9STRA) HSP 1 Score: 107 bits (268), Expect = 3.530e-25 Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 1
Query: 16 TRLFCADCGECFHRWCLPSNIVPLDKKALAAWRCPNCKVCEVCTETAKSDESLLLMCELCDRAYHTYCLTPSTDKPPEGTWICGQCISCTTC 291
T +FC DCGE FH +C+ + I +D ++AAWRCPNCK+CE+ ++ + DE+ +L CE+CDR + L P P G WICGQC+ C C
Sbjct: 304 TMIFCVDCGESFHSFCVNAPIHSMDSSSIAAWRCPNCKICEISGDSPE-DETRMLFCEMCDRGFTLDLLDPPLSDAPSGIWICGQCVDCAKC 394
BLAST of mRNA_E-fasciculatus_F_contig15125.3634.1 vs. uniprot
Match: A0A6G0WLH6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WLH6_9STRA) HSP 1 Score: 106 bits (265), Expect = 9.070e-25 Identity = 43/98 (43.88%), Postives = 59/98 (60.20%), Query Frame = 1
Query: 4 NQPFTRLFCADCGECFHRWCL--PSNIVPLDKKALAAWRCPNCKVCEVCTETAKSDESLLLMCELCDRAYHTYCLTPSTDKPPEGTWICGQCISCTTC 291
Q +FC DCGE FH +CL P ++ +K WRCPNCK+CE C DES LL+C++C+R YHT+CL P + P ++CG C+ C +C
Sbjct: 1024 GQTQAMVFCVDCGEAFHGFCLHPPLDLEGRSEKIQEYWRCPNCKICEFCGRCTPEDESHLLVCDVCERGYHTFCLKPKLREVPSSGFVCGSCVQCESC 1121
BLAST of mRNA_E-fasciculatus_F_contig15125.3634.1 vs. uniprot
Match: A0A7S2A0R2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A0R2_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.230e-24 Identity = 46/92 (50.00%), Postives = 57/92 (61.96%), Query Frame = 1
Query: 16 TRLFCADCGECFHRWCLPSNIVPLDKKALAAWRCPNCKVCEVCTETAKSDESLLLMCELCDRAYHTYCLTPSTDKPPEGTWICGQCISCTTC 291
T LFC DCGE +H +C + I + AL AWRCPNCK+CE+ E + DE+ LL CE+CDRA+ L P P G WICGQC+ C C
Sbjct: 417 TMLFCVDCGEAYHSFCCNAPIHSMSNSALLAWRCPNCKICEISGEVPE-DETKLLYCEMCDRAFTLDLLDPPLKSVPTGLWICGQCVDCKEC 507
BLAST of mRNA_E-fasciculatus_F_contig15125.3634.1 vs. uniprot
Match: A0A7S3Q114_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q114_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.320e-24 Identity = 44/92 (47.83%), Postives = 58/92 (63.04%), Query Frame = 1
Query: 16 TRLFCADCGECFHRWCLPSNIVPLDKKALAAWRCPNCKVCEVCTETAKSDESLLLMCELCDRAYHTYCLTPSTDKPPEGTWICGQCISCTTC 291
T LFC DCGE +H +C + I ++ A+ WRCPNCK+CE+ T DE+ LL CE+CDRA+ ++P P G WICGQC+ CT C
Sbjct: 933 TMLFCVDCGEAYHSFCATAPIHSMNDAAVDGWRCPNCKLCEI-TGQVTDDETKLLYCEMCDRAFSLDLISPPLSAVPSGLWICGQCVDCTEC 1023 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15125.3634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15125.3634.1 >prot_E-fasciculatus_F_contig15125.3634.1 ID=prot_E-fasciculatus_F_contig15125.3634.1|Name=mRNA_E-fasciculatus_F_contig15125.3634.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=97bp GNQPFTRLFCADCGECFHRWCLPSNIVPLDKKALAAWRCPNCKVCEVCTEback to top mRNA from alignment at E-fasciculatus_F_contig15125:2223..2921- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15125.3634.1 ID=mRNA_E-fasciculatus_F_contig15125.3634.1|Name=mRNA_E-fasciculatus_F_contig15125.3634.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=699bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15125:2223..2921- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15125:2223..2921- >mRNA_E-fasciculatus_F_contig15125.3634.1 ID=mRNA_E-fasciculatus_F_contig15125.3634.1|Name=mRNA_E-fasciculatus_F_contig15125.3634.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=582bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15125:2223..2921- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |