mRNA_E-fasciculatus_F_contig1511.3623.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1511.3623.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 108 bits (269), Expect = 5.120e-25 Identity = 61/136 (44.85%), Postives = 77/136 (56.62%), Query Frame = 3
Query: 189 GGRLRWYWSTIELQLVSLEFCRVSRSVPTFHVRVTRETPRSLMRDAATPGEDLSSLIEDNSDRFPS-SRVPALRALRLTWTLPMKDLPQNAVVELWRLAESLALRGGDAECTLKSVGWPRGLKHLTMDTEWKVQVQ 593
GG RWY ST ELQL SL+ CR RS PT HVRVT TP SL + +L S + SRVP +RALRLTW M+ L Q A +ELW +E L + G +L SV WP GL L +DT++ + ++
Sbjct: 23 GGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPT-----VQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQLVLDTDFHIPME 153
BLAST of mRNA_E-fasciculatus_F_contig1511.3623.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 1.720e-19 Identity = 61/132 (46.21%), Postives = 74/132 (56.06%), Query Frame = 3
Query: 189 GGRLRWYWSTIELQLVSLEFCRVSRSVPTFHVRVTRETPRSLM--RDAATPGEDLSSLIEDNSDRFPSSRVPALRALRLTWTLPMKDLPQNAVVELWRLAESLALRGGDAECTLKS-VGWPRGLKHLTMDTE 575
GG RWY ST+ELQL SL+ CR R+ HV V +TPRSL R A T S + SSRVP +RALRLTW L M+ L + A +ELW +E L L G +L S V WPRGL L + T+
Sbjct: 25 GGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHI------SSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTD 150
BLAST of mRNA_E-fasciculatus_F_contig1511.3623.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 1.400e-18 Identity = 56/127 (44.09%), Postives = 69/127 (54.33%), Query Frame = 3
Query: 189 GGRLRWYWSTIELQLVSLEFCRVSRSVPTFHVRVTRETPRSLMRDAATPGEDLSSLIEDNSDRFPSSRVPALRALRLTWTLPMKDLPQNAVVELWRLAESLALRGGDAECTLKSVGWPRGLKHLTMD 569
GG RWY ST++LQL SLEFC RS P HV V ETP +L SL + N S+RVPA++A+ LTW P + +A ELW ESL L+ L SV WP+GL+ L MD
Sbjct: 23 GGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLW-----------SLGQANPTAGTSTRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLVMD 138
BLAST of mRNA_E-fasciculatus_F_contig1511.3623.1 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 1.760e-17 Identity = 61/169 (36.09%), Postives = 77/169 (45.56%), Query Frame = 3
Query: 156 VQQLLNGNGRLGGRLRWYWSTIELQLVSLEFCRVSRSVPTFHVRVTRETPRSLMRDAATPGEDLSSLIEDNSDRFP------------------------SSRVPALRALRLTWTLPMKDLPQNAVVELWRLAESLALRGGDAECTLKSVGWPRGLKHLTMDTEWKVQV 590
+ Q G G+ RWY ST+EL+L SLE CR R VPT HVRV TP SL A P + + + SSRVP +AL LTW LP + L Q VELW E L LR + L SV WP+ LK L ++T ++ +
Sbjct: 17 ISQAYEGRGK-----RWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHAMPTRAHTRSSKTRAXXXXXXXXXXXXXXXXXXXXXXXXKARISSRVPVGQALGLTWALPTEILLQGVAVELWTKLEFLQLRESLSPSDLVSVAWPQNLKRLALETGFEAAI 180
BLAST of mRNA_E-fasciculatus_F_contig1511.3623.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 2.980e-17 Identity = 55/130 (42.31%), Postives = 78/130 (60.00%), Query Frame = 3
Query: 189 GGRLRWYWSTIELQLVSLEFCRVSRSVPTFHVRVTRETPRSLMRDAATPGEDLSSLIEDNSDRFPSSRVPALRALRLTWTLPMKDLPQNAVVELWRLAESLALRGGDAECTLKSVGWPRG-LKHLTMDTE 575
G RWY ST+ELQLVSLEFC R VPT HVRV R+TPRSL +P + ++ + + + S+RVPA++A LTW L M+ L Q + VEL ++ + G + +L S+ W + LK L D++
Sbjct: 31 GQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLW----SPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSD 156
BLAST of mRNA_E-fasciculatus_F_contig1511.3623.1 vs. uniprot
Match: A0A6H5JL88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL88_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 2.310e-15 Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 3
Query: 201 RWYWSTIELQLVSLEFCRVSRSVPTFHVRVTRETPRSLM--RDAATPGEDLSSLIEDNSDRFPSSRVPALRALRLTWTLPMKDLPQNAVVELWRLAESLALRGGDAECTLKSVGWPRGLKHL 560
RW+ ST+ +QL SLEFCR SRS+PT + V PRSL R + TP I R P SRVP +RA RL W L M+ L Q+ VELW +SL L G ++ + S+ P+ L+ L
Sbjct: 4 RWFTSTLNIQLASLEFCRASRSIPTIALHVDSRIPRSLWDGRKSQTPSSTRGLEIRCWKAR-PLSRVPLIRASRLNWGLSMETLLQSTAVELWTGLKSLHLCGDVSDASPASMVQPQRLEQL 124
BLAST of mRNA_E-fasciculatus_F_contig1511.3623.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 82.4 bits (202), Expect = 1.140e-14 Identity = 51/127 (40.16%), Postives = 62/127 (48.82%), Query Frame = 3
Query: 189 GGRLRWYWSTIELQLVSLEFCRVSRSVPTFHVRVTRETPRSLMRDAA---TPGEDLSSLIEDNSDRFPSSRVPALRALRLTWTLPMKDLPQNAVVELWRLAESLALRGGDAECTLKSVGWPRGLKHL 560
G RWY ST+ELQLVSLE C RS HV V +TP +L TP + + N RVPA++AL TW LPM LPQ A E + E G +++SV WP LK L
Sbjct: 103 GQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSN-------RVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRL 222
BLAST of mRNA_E-fasciculatus_F_contig1511.3623.1 vs. uniprot
Match: A0A6H5KA67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA67_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 2.360e-13 Identity = 40/51 (78.43%), Postives = 43/51 (84.31%), Query Frame = 2
Query: 515 MHPEIGGVASRAQAPDDGHRVEGASARGVVAIRSARVIVWKLVQPASCCHC 667
MH IGGVASRAQAPD+GHRV GASARGVVAIRS +VWKLV+PAS HC
Sbjct: 1 MHSGIGGVASRAQAPDNGHRVAGASARGVVAIRSTSAVVWKLVRPASSRHC 51
BLAST of mRNA_E-fasciculatus_F_contig1511.3623.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 2.980e-13 Identity = 49/132 (37.12%), Postives = 69/132 (52.27%), Query Frame = 3
Query: 189 GGRLRWYWSTIELQLVSLEFCRVSRSVPTFHVRVTRETPRSLMRDAATPGEDLSSLIEDNSDRFPSSRVPALRALRLTWTLPMKDLPQNAVVELWRLAESLALRGGDAECTLKSVGWPRGLKHLTMDTEWKV 584
G RWY ST+ELQLVSLE C R V T HVRV +TP SL P ++ ++ + SSRVP ++A LTW LPM L Q + E+ + + +L+S WP+ LK + +++ V
Sbjct: 23 GQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLW----FPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFESDMTV 150
BLAST of mRNA_E-fasciculatus_F_contig1511.3623.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 6.650e-12 Identity = 49/134 (36.57%), Postives = 74/134 (55.22%), Query Frame = 3
Query: 174 GNGRLGGRLRWYWSTIELQLVSLEFCRVSRSVPTFHVRVTRETPRSLMRDAATPGEDLSSLIEDNSDRFPSSRVPALRALRLTWTLPMKDLPQNAVVELWRLAESLALRGGDAECTLKSVGWPRGLKHLTMDTE 575
G+GR RWY ST+ELQLVSLEFC RS +F V++ R+TP SL +P + +L + + + SRVPA++A W LPM+ L + EL +++E+ G + + +GW + L L +E
Sbjct: 41 GDGRAK---RWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLW----SPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPGRMGWFQKLTRLMFYSE 167 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1511.3623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1511.3623.1 >prot_E-fasciculatus_F_contig1511.3623.1 ID=prot_E-fasciculatus_F_contig1511.3623.1|Name=mRNA_E-fasciculatus_F_contig1511.3623.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=325bp MAKMGTGCVRRKNDTQQQTCLYALLRRERGGKEVPEGLLDRSPTATGVQQback to top mRNA from alignment at E-fasciculatus_F_contig1511:3294..5616- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1511.3623.1 ID=mRNA_E-fasciculatus_F_contig1511.3623.1|Name=mRNA_E-fasciculatus_F_contig1511.3623.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2323bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1511:3294..5616- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1511:3294..5616- >mRNA_E-fasciculatus_F_contig1511.3623.1 ID=mRNA_E-fasciculatus_F_contig1511.3623.1|Name=mRNA_E-fasciculatus_F_contig1511.3623.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1950bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1511:3294..5616- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |