prot_E-fasciculatus_F_contig15100.3618.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig15100.3618.1
Unique Name	prot_E-fasciculatus_F_contig15100.3618.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	116

Homology

[Close]

BLAST of mRNA_E-fasciculatus_F_contig15100.3618.1 vs. uniprot
Match: A0A6H5L288_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L288_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 4.680e-70
Identity = 107/111 (96.40%), Postives = 109/111 (98.20%), Query Frame = 0

Query:    1 MCKGAEKTALVAAVAAMAWGGWMAGQHPHKLGWGVIMAVIGGIIGNWFSALNGGAEGRIVWGDWRCNALSFAGVITAGRYAASLEPEEREATLESAFFVALVAQGFGTISG 111
            MCKGAEKTALVAAVAAMAWG WMAGQHPHKLGWG+IMAV+GGIIGNWFS LNGGAEGRIVWGDWRCNALSFAGVITAGRYAASLEPEEREATLESAFFVALVAQGFGTISG
Sbjct:  143 MCKGAEKTALVAAVAAMAWGSWMAGQHPHKLGWGIIMAVMGGIIGNWFSTLNGGAEGRIVWGDWRCNALSFAGVITAGRYAASLEPEEREATLESAFFVALVAQGFGTISG 253

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig15100.3618.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig15100.3618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5L288_9PHAE	4.680e-70	96.40	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 49..116
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 31..48
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 26..30
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 7..25
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..6
None	No IPR available	TMHMM	TMhelix		coord: 31..50
None	No IPR available	TMHMM	TMhelix		coord: 9..26

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig15100	contig	E-fasciculatus_F_contig15100:950..2946 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig15100.3618.1	mRNA_E-fasciculatus_F_contig15100.3618.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig15100 950..2946 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig15100.3618.1 ID=prot_E-fasciculatus_F_contig15100.3618.1|Name=mRNA_E-fasciculatus_F_contig15100.3618.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=116bp
MCKGAEKTALVAAVAAMAWGGWMAGQHPHKLGWGVIMAVIGGIIGNWFSA
LNGGAEGRIVWGDWRCNALSFAGVITAGRYAASLEPEEREATLESAFFVA
LVAQGFGTISGEMERV