mRNA_E-fasciculatus_F_contig15091.3611.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15091.3611.1 vs. uniprot
Match: D7FTA5_ECTSI (Myb_Cef domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTA5_ECTSI) HSP 1 Score: 201 bits (510), Expect = 8.810e-62 Identity = 111/117 (94.87%), Postives = 112/117 (95.73%), Query Frame = 1
Query: 58 PMRDEVLGLNDDASMASMSPMGSVSSFGGGPVGSKEERARERRRKEELRAKLSGLPAPQYEYELVAPDVMEEADGAPLREEDAADRDARLLAEQAAREEAEFRKRSQAVRRDLPRPG 408
P LGLNDDASMASMSPMGSVSSFGGGPVGSKEERARERR+KEELRAKLSGLPAPQYEYELVAPDVMEEADGAPLREEDAADRDARLLAEQAAREEAEFRKRSQAVRRDLPRPG
Sbjct: 196 PGTPSTLGLNDDASMASMSPMGSVSSFGGGPVGSKEERARERRKKEELRAKLSGLPAPQYEYELVAPDVMEEADGAPLREEDAADRDARLLAEQAAREEAEFRKRSQAVRRDLPRPG 312
BLAST of mRNA_E-fasciculatus_F_contig15091.3611.1 vs. uniprot
Match: A0A6H5L1Z3_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z3_9PHAE) HSP 1 Score: 202 bits (513), Expect = 8.390e-58 Identity = 113/116 (97.41%), Postives = 114/116 (98.28%), Query Frame = 1
Query: 61 MRDEVLGLNDDASMASMSPMGSVSSFGGGPVGSKEERARERRRKEELRAKLSGLPAPQYEYELVAPDVMEEADGAPLREEDAADRDARLLAEQAAREEAEFRKRSQAVRRDLPRPG 408
MRDE LGLNDDASMASMSPMGSVSSFGGGP GSKEE+ARERRRKEELRAKLSGLPAPQYEYELVAPDVMEEADGAPLREEDAADRDARLLAEQAAREEAEFRKRSQAVRRDLPRPG
Sbjct: 453 MRDE-LGLNDDASMASMSPMGSVSSFGGGPAGSKEEKARERRRKEELRAKLSGLPAPQYEYELVAPDVMEEADGAPLREEDAADRDARLLAEQAAREEAEFRKRSQAVRRDLPRPG 567
BLAST of mRNA_E-fasciculatus_F_contig15091.3611.1 vs. uniprot
Match: A0A835YNI3_9STRA (Cell division cycle 5-like protein-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNI3_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 4.920e-16 Identity = 58/118 (49.15%), Postives = 74/118 (62.71%), Query Frame = 1
Query: 55 TPMRDEVLGLNDDASMASMSPMGSVSSFGGGPVGSKEERARERRRKEELRAKLSGLPAPQYEYELVAPDVMEEADG-APLREEDAADRDARLLAEQAAREEAEFRKRSQAVRRDLPRP 405
TPMRD+ LGLN + S GG S+ ER R RR EL A+L GLPAPQY YE+ PDV ++ + A EEDAADRD R+ A + A++EAE+R R+Q ++RDLPRP
Sbjct: 445 TPMRDQ-LGLNREDDFMSTP---------GGSTSSRMERERARRAAAELAAQLQGLPAPQYSYEISLPDVKDDDEKTAQQLEEDAADRDRRIEAARIAQQEAEWRARTQVLKRDLPRP 552
BLAST of mRNA_E-fasciculatus_F_contig15091.3611.1 vs. uniprot
Match: A0A7S2SCC5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCC5_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 2.380e-13 Identity = 55/121 (45.45%), Postives = 71/121 (58.68%), Query Frame = 1
Query: 46 GGTTPMRDEVLGLNDDASMASMSPMGSVSSFGGGPVGSKEERARERRRKEELRAKLSGLPAPQYEYELVAPDVM-EEADGAPLREEDAADRDARLLAEQAAREEAEFRKRSQAVRRDLPRP 405
G TP+RDE LG+N+D + GG G E AR R ++ +L+ LS LP PQY+YE+ PDV +EA+ EEDAADR + A EEAEF++RS AVRR+LPRP
Sbjct: 435 GSATPLRDE-LGVNED-------------NLAGGAPGMSEA-ARLRHQRAQLQMSLSNLPEPQYQYEIEVPDVKPDEAEAKQAMEEDAADRXXXXXXXRRAAEEAEFQRRSAAVRRELPRP 540
BLAST of mRNA_E-fasciculatus_F_contig15091.3611.1 vs. uniprot
Match: A0A7S0REZ7_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0REZ7_9CHLO) HSP 1 Score: 74.3 bits (181), Expect = 7.960e-13 Identity = 57/118 (48.31%), Postives = 75/118 (63.56%), Query Frame = 1
Query: 55 TPMRDEVLGLNDDASMASMSPMGSVSSFGGGPVGSKEERARERRRKEELRAKLSGLPAPQYEYELVAPDVMEEA-DGAPLREEDAADRDARLLAEQAAREEAEFRKRSQAVRRDLPRP 405
TP+RDE LGLND S+A+ +G + E+AR + E+RA LS LPAPQ EY+LVAP++ E+A D EEDAAD AR L E+A R AE +K+S+A++R LPRP
Sbjct: 262 TPIRDE-LGLNDADSLAT---------YGMPTDNRRAEQARLAALRSEVRAGLSSLPAPQNEYQLVAPELPEDAMDAEGALEEDAADIKARRLREEAERAAAEEKKKSKALQRGLPRP 369
BLAST of mRNA_E-fasciculatus_F_contig15091.3611.1 vs. uniprot
Match: A0A7S0WNZ6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WNZ6_9CHLO) HSP 1 Score: 74.3 bits (181), Expect = 8.240e-13 Identity = 57/118 (48.31%), Postives = 75/118 (63.56%), Query Frame = 1
Query: 55 TPMRDEVLGLNDDASMASMSPMGSVSSFGGGPVGSKEERARERRRKEELRAKLSGLPAPQYEYELVAPDVMEEA-DGAPLREEDAADRDARLLAEQAAREEAEFRKRSQAVRRDLPRP 405
TP+RDE LGLND S+A+ +G + E+AR + E+RA LS LPAPQ EY+LVAP++ E+A D EEDAAD AR L E+A R AE +K+S+A++R LPRP
Sbjct: 470 TPIRDE-LGLNDADSLAT---------YGMPTDNRRAEQARLAALRSEVRAGLSSLPAPQNEYQLVAPELPEDAMDAEGALEEDAADIKARRLREEAERAAAEEKKKSKALQRGLPRP 577
BLAST of mRNA_E-fasciculatus_F_contig15091.3611.1 vs. uniprot
Match: A0A699YXU2_HAELA (Myb_Cef domain-containing protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YXU2_HAELA) HSP 1 Score: 69.7 bits (169), Expect = 3.180e-11 Identity = 56/120 (46.67%), Postives = 74/120 (61.67%), Query Frame = 1
Query: 55 TPMRDEVLGLNDDASMASMSPMGSVSSFGGGPVGSKEERARERRRKEELRAKLSGLPAPQYEYELVAPDVM---EEADGAPLREEDAADRDARLLAEQAAREEAEFRKRSQAVRRDLPRP 405
TP+RDE LND+AS+ASM+ +F + E+AR + ELRA LS LPAPQ EY++VAP++ E +G EEDAAD AR L E A R E +K+S+A++R LPRP
Sbjct: 271 TPIRDEFK-LNDEASLASMNV-----AF----ASKRAEQARLAALRGELRAGLSTLPAPQNEYQVVAPELELEGEAEEGGEAMEEDAADTKARKLREAAQRAAEEEKKKSKALQRGLPRP 380
BLAST of mRNA_E-fasciculatus_F_contig15091.3611.1 vs. uniprot
Match: A0A699Z4J8_HAELA (Uncharacterized protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699Z4J8_HAELA) HSP 1 Score: 69.7 bits (169), Expect = 3.460e-11 Identity = 56/120 (46.67%), Postives = 74/120 (61.67%), Query Frame = 1
Query: 55 TPMRDEVLGLNDDASMASMSPMGSVSSFGGGPVGSKEERARERRRKEELRAKLSGLPAPQYEYELVAPDVM---EEADGAPLREEDAADRDARLLAEQAAREEAEFRKRSQAVRRDLPRP 405
TP+RDE LND+AS+ASM+ +F + E+AR + ELRA LS LPAPQ EY++VAP++ E +G EEDAAD AR L E A R E +K+S+A++R LPRP
Sbjct: 456 TPIRDEFK-LNDEASLASMNV-----AF----ASKRAEQARLAALRGELRAGLSTLPAPQNEYQVVAPELELEGEAEEGGEAMEEDAADTKARKLREAAQRAAEEEKKKSKALQRGLPRP 565
BLAST of mRNA_E-fasciculatus_F_contig15091.3611.1 vs. uniprot
Match: A0A3F2S176_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S176_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 1.860e-9 Identity = 50/119 (42.02%), Postives = 67/119 (56.30%), Query Frame = 1
Query: 55 TPMRDEVLGLNDDASMASMSPMGSVSSFGGGPVGSKEERARERRRKEELRAKLSGLPAPQYEYELVAPDVMEEADGAP--LREEDAADRDARLLAEQAAREEAEFRKRSQAVRRDLPRP 405
TP+RDE LG+N + +G +K E+AR +R LR LPAPQ EYE+ P+ +EADG LREEDA +R+ARL+ E E ++RS AV++DLPRP
Sbjct: 428 TPLRDE-LGINPEQL------------YGTEAASAKAEKARAKRLASSLRQGFDSLPAPQNEYEINIPEK-DEADGGDVNLREEDAGEREARLVRLHELEAERELKRRSTAVQKDLPRP 532
BLAST of mRNA_E-fasciculatus_F_contig15091.3611.1 vs. uniprot
Match: A0A8J5MJE4_HOMAM (Cell division cycle 5-like protein-like n=2 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5MJE4_HOMAM) HSP 1 Score: 63.9 bits (154), Expect = 3.460e-9 Identity = 49/129 (37.98%), Postives = 75/129 (58.14%), Query Frame = 1
Query: 49 GTTPMRDEVLGLNDDASMASMSPMGSVSSFGGGPVGSKEE-RARERRRKEELRAKLSGLPAPQYEYELVAPDVMEEADGAPLRE---------EDAADRDARLLAEQAAREEAEFRKRSQAVRRDLPRP 405
G TP+RD+ L +N++ ++ P+ ++ +A +R +E L++ L LPAP+ ++E+V PD + DG P E ED AD DAR +A+ AAR +AE +KRSQAV+R+LPRP
Sbjct: 414 GATPIRDK-LNINEEGALV--------------PIDDRQALKAYQRNMREALQSGLKSLPAPKNDFEIVVPD---QEDGQPGDEDKDRGEAMIEDQADLDARAVADAAARRDAEMKKRSQAVQRNLPRP 524 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15091.3611.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15091.3611.1 >prot_E-fasciculatus_F_contig15091.3611.1 ID=prot_E-fasciculatus_F_contig15091.3611.1|Name=mRNA_E-fasciculatus_F_contig15091.3611.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=137bp GGGGGGGGGGGGGGVGGTTPMRDEVLGLNDDASMASMSPMGSVSSFGGGPback to top mRNA from alignment at E-fasciculatus_F_contig15091:3..1302+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15091.3611.1 ID=mRNA_E-fasciculatus_F_contig15091.3611.1|Name=mRNA_E-fasciculatus_F_contig15091.3611.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1300bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15091:3..1302+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15091:3..1302+ >mRNA_E-fasciculatus_F_contig15091.3611.1 ID=mRNA_E-fasciculatus_F_contig15091.3611.1|Name=mRNA_E-fasciculatus_F_contig15091.3611.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=822bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15091:3..1302+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |