mRNA_E-fasciculatus_F_contig15090.3610.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15090.3610.1 vs. uniprot
Match: D8LGE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE0_ECTSI) HSP 1 Score: 337 bits (864), Expect = 6.950e-111 Identity = 183/196 (93.37%), Postives = 189/196 (96.43%), Query Frame = 1
Query: 4 VMISPYFGGLSTKHGYRKVLMVASGLIALGALAYSLAWNTAALIGAQIIMGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFVGGFLAFLIKDRRIPLLGEFLVLTSFTAPAYVMMVAALVLFALLKLVFEDSIPKRKLTKTGKQVTVSTKRSTPLVKTEAEIAYSSGSAAKYLMGTPSDVSLAR 591
VMISPYFGGLSTKHGYRKVLMVASG+IALGALAY+LAW TAALIGAQIIMGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFVGGFL+FLIKDRRIPLLGEFLVLTSFTAPAYVM+VAALVLFALLKLVFEDSIP K TKT KQV VSTK+STPLVKTEAE+AYSSGSAAKYLMG PSDVSLAR
Sbjct: 47 VMISPYFGGLSTKHGYRKVLMVASGVIALGALAYALAWTTAALIGAQIIMGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFVGGFLSFLIKDRRIPLLGEFLVLTSFTAPAYVMIVAALVLFALLKLVFEDSIPNGKPTKTSKQVKVSTKKSTPLVKTEAEMAYSSGSAAKYLMGAPSDVSLAR 242
BLAST of mRNA_E-fasciculatus_F_contig15090.3610.1 vs. uniprot
Match: A0A6H5KUL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUL2_9PHAE) HSP 1 Score: 336 bits (861), Expect = 1.590e-108 Identity = 182/196 (92.86%), Postives = 188/196 (95.92%), Query Frame = 1
Query: 4 VMISPYFGGLSTKHGYRKVLMVASGLIALGALAYSLAWNTAALIGAQIIMGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFVGGFLAFLIKDRRIPLLGEFLVLTSFTAPAYVMMVAALVLFALLKLVFEDSIPKRKLTKTGKQVTVSTKRSTPLVKTEAEIAYSSGSAAKYLMGTPSDVSLAR 591
VMISPYFGGLSTKHGYRKVLMVASGLIALGALAY+LAW TAALIGAQIIMGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFVGGFL+FLIKDRRIPLLGEFLVLTSFTAPAYVM+VAAL+LF LLKLVFEDSIPK K TKT KQV STK+STPLVKTEAEIAYSSGSAAKYLMG PS+VSLAR
Sbjct: 221 VMISPYFGGLSTKHGYRKVLMVASGLIALGALAYALAWTTAALIGAQIIMGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFVGGFLSFLIKDRRIPLLGEFLVLTSFTAPAYVMVVAALLLFTLLKLVFEDSIPKGKSTKTSKQVKASTKKSTPLVKTEAEIAYSSGSAAKYLMGAPSEVSLAR 416
BLAST of mRNA_E-fasciculatus_F_contig15090.3610.1 vs. uniprot
Match: D8LI50_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI50_ECTSI) HSP 1 Score: 166 bits (420), Expect = 1.330e-44 Identity = 86/160 (53.75%), Postives = 119/160 (74.38%), Query Frame = 1
Query: 1 RVMISPYFGGLSTKHGYRKVLMVASGLIALGALAYSLAWNTAALIGAQIIMGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFVGGFLAFLIKDRRIPLLGEFLVLTSFTAPAYVMMVAALVLFALLKLVFEDSIPKR--KLTKTGKQV 474
R ++SP FG +ST+HGYR+ L++++ L++ G L Y++A + + +Q+ +GVGSGTLGVTR YVADK+T EQRTYLLAYTTAVQYAGFT MP +GGF ++L+ IPLLG FL+LT FTAPA+ + + VLF LL VF+D I ++ K T + K++
Sbjct: 141 RTLMSPVFGRMSTEHGYRRALLISTALVSFGTLFYAVADSVFTVFLSQVFLGVGSGTLGVTRGYVADKTTKEQRTYLLAYTTAVQYAGFTVMPSLGGFFSYLLGSTEIPLLGRFLMLTQFTAPAFFVAAMSTVLFLLLWFVFQDGIEQKPAKTTSSAKEL 300
BLAST of mRNA_E-fasciculatus_F_contig15090.3610.1 vs. uniprot
Match: D7FUX3_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX3_ECTSI) HSP 1 Score: 159 bits (402), Expect = 2.020e-42 Identity = 83/160 (51.88%), Postives = 118/160 (73.75%), Query Frame = 1
Query: 1 RVMISPYFGGLSTKHGYRKVLMVASGLIALGALAYSLAWNTAALIGAQIIMGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFVGGFLAFLIKDRRIPLLGEFLVLTSFTAPAYVMMVAALVLFALLKLVFEDSIPKR--KLTKTGKQV 474
R ++SP FG +ST+HGYR+ ++++ LI +L Y++A + + +Q+ +G+GSGTLGVTRAYVADK+T EQRTYLLAYTT+VQYAG T MP +GGF ++L+ IPLLG FL+LT FTAPA+ + + VLF LL VF+D I ++ K + +GK++
Sbjct: 61 RTLLSPVFGRMSTEHGYRRAFLISTVLIPFASLFYAVADSVLTVFLSQLFLGMGSGTLGVTRAYVADKTTKEQRTYLLAYTTSVQYAGLTVMPILGGFFSYLLGSTEIPLLGRFLLLTQFTAPAFFVAAMSTVLFLLLWSVFQDGIEQKPAKTSSSGKEL 220
BLAST of mRNA_E-fasciculatus_F_contig15090.3610.1 vs. uniprot
Match: A0A7S3UZ09_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZ09_HETAK) HSP 1 Score: 135 bits (340), Expect = 4.130e-34 Identity = 77/147 (52.38%), Postives = 99/147 (67.35%), Query Frame = 1
Query: 1 RVMISPYFGGLSTKHGYRKVLMVASGLIALGALAYSLAWNTAALIGAQIIMGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFVGGFLAFLIKDRRIPLLGEFLVLTSFTAPAYVMMVAALVLFALLKLVFEDSIP 441
RV+ SP+FG +ST +GY+KVL A+ ++ G Y+ A N LI Q+++G+GSGTLGVTRAYVAD ST RT L+AY TA+QY GFT P VGG L++L+ DR + LL L LT +TAPA +M ALV ALL F D +P
Sbjct: 95 RVLSSPHFGKMSTDYGYKKVLTFAACVMIAGCFLYATAQNCYWLIAGQVVIGLGSGTLGVTRAYVADNSTKRSRTVLMAYLTALQYGGFTVTPCVGGLLSYLLGDRELSLLPG-LSLTQYTAPALLMAALALVAIALLAGPFRDYVP 240
BLAST of mRNA_E-fasciculatus_F_contig15090.3610.1 vs. uniprot
Match: A0A1E7EN14_9STRA (MFS general substrate transporter n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EN14_9STRA) HSP 1 Score: 115 bits (289), Expect = 3.370e-27 Identity = 67/167 (40.12%), Postives = 103/167 (61.68%), Query Frame = 1
Query: 1 RVMISPYFGGLSTKHGYRKVLMVASGLIALGALAYSLAWNTAA---LIGAQIIMGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFVGGFLAFLIKDRRIPLLGEFLVLTSFTAPAYVMMVAALVLFALLKLVFEDSI----PKRKLTKTGKQVTV 480
R+++SP FGG S +GY K L+ + ++ +G L Y+ A N + LI AQIIMG+GSGTLGVTRA+VA+ + RT +A+ TAVQYAGFT PF+G +++D + G F +TAPAY M + + +++L F+D + PK+ K+ K++++
Sbjct: 35 RILVSPLFGGWSVTYGYSKTLLFSCSILWIGTLLYAQAQNVGSVSFLIFAQIIMGIGSGTLGVTRAFVAEVTAQRSRTTYMAWITAVQYAGFTVTPFIGALFNKVLQDTEFKV-GLFR-FNMYTAPAYFMNIVITITIVMMRLFFKDRVRVQAPKKNTKKSNKRISI 199
BLAST of mRNA_E-fasciculatus_F_contig15090.3610.1 vs. uniprot
Match: A0A4D9CPX9_9STRA (MFS domain-containing protein (Fragment) n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPX9_9STRA) HSP 1 Score: 113 bits (283), Expect = 6.240e-27 Identity = 66/145 (45.52%), Postives = 94/145 (64.83%), Query Frame = 1
Query: 1 RVMISPYFGGLSTKHGYRKVLMVASGLIALGALAYSLAWNTAALIGAQIIMGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFVGGFLAFLIKDRRIPLLGEFLVLTSFTAPAYVMMVAALVLFALLKLVFEDS 435
R++ SPY G LS +GYR +L+ + L+A G L Y+ A + ++ AQ++MG+GSGTLGVTRA+VA+++ +RT LLAY TAVQY GFT MP GG L+ + + R + G L +TAPA +M LV LL VF+++
Sbjct: 31 RLISSPYIGRLSEVYGYRPILLATTLLLAAGTLLYASATSIYHVLVAQVVMGLGSGTLGVTRAWVAEQTERHKRTILLAYLTAVQYGGFTVMPMAGGVLSDIFQRRTFAIAGS-LRADIYTAPALLMCFLCLVALVLLCTVFKEA 174
BLAST of mRNA_E-fasciculatus_F_contig15090.3610.1 vs. uniprot
Match: A0A7S2KJD8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KJD8_9STRA) HSP 1 Score: 114 bits (286), Expect = 7.860e-27 Identity = 69/151 (45.70%), Postives = 94/151 (62.25%), Query Frame = 1
Query: 1 RVMISPYFGGLSTKHGYRKVLMVASGLIALGALAYSLAWNTAALIGAQIIMGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFVGGFLAFLIKDRRIPLLGEFLVLTSFTAPAYVMMVAALVLFALLKLVFEDSIPKRKL 453
RV+ SP FG ST GY L ++ ++ +GA+ YS + +T LI +Q +MGVGSGTLGVTRAYVA+ ++ E RT +A+ TAVQYAGFT P +G F + I D G V+ F APA ++V +V LL +F D IPK+K+
Sbjct: 22 RVVSSPAFGRWSTAKGYLATLKISIFVLMVGAILYSWSNSTIMLIFSQSVMGVGSGTLGVTRAYVAEVTSKESRTKYMAFITAVQYAGFTVTPIIGAFFSSYISDNSDNEGG--FVINEFNAPALFIVVLCVVALILLHTIFHDRIPKKKV 170
BLAST of mRNA_E-fasciculatus_F_contig15090.3610.1 vs. uniprot
Match: A0A8J2SKM7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKM7_9STRA) HSP 1 Score: 114 bits (284), Expect = 2.530e-26 Identity = 70/152 (46.05%), Postives = 91/152 (59.87%), Query Frame = 1
Query: 1 RVMISPYFGGLSTKHGYRKVLMVASGLIALGALAYSLAWNTAALIGAQIIMGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFVGGFLAF----LIKDRRIPLLGEFLVLTSFTAPAYVMMVAALVLFALLKLV-FEDSIP 441
RV++SP +G STKHGYRK+L+ A LI LGAL Y+ WN +L+ AQ+I+G G GTLGVTRAY A+ +QRT L TA QY G TC F+G LA L KD + L ++ T AY +++ ALV LL+ F D +P
Sbjct: 68 RVLVSPSYGAYSTKHGYRKILVFAHCLIVLGALLYTRVWNVPSLVCAQLILGFGCGTLGVTRAYFAESVPRDQRTVWLGRVTAAQYCGLTCTSFLGSLLARTGERLEKDASLAWLN----ISPLTCSAYAVLLMALVALLLLQAPSFYDFVP 215
BLAST of mRNA_E-fasciculatus_F_contig15090.3610.1 vs. uniprot
Match: A0A7S2V0P8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0P8_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.840e-26 Identity = 69/147 (46.94%), Postives = 94/147 (63.95%), Query Frame = 1
Query: 1 RVMISPYFGGLSTKHGYRKVLMVASGLIALGALAYSLAWNTAALIGAQIIMGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFVGGFLAFLIKDRRIPLLGEFLVLTSFTAPAYVMMVAALVLFALLKLVFEDSIP 441
R+ SPYFG LST+ GY+ VL++A + +G L Y+ A +T L+ Q +MG G+GTLGVTRAYVAD ++ QRT +AY TA+QYAGFT P +G L+ D G F V + F+APAY + AAL+ LL+ F++ IP
Sbjct: 114 RIFASPYFGQLSTEKGYKDVLLIAIAITVVGCLTYAHATSTWLLMVGQCVMGFGAGTLGVTRAYVADNTSSAQRTTYIAYITALQYAGFTVCPSLGAAFTLLLGDDTYSW-GPFQV-SKFSAPAYFHIGAALLGGLLLQFAFDNYIP 258 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15090.3610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15090.3610.1 >prot_E-fasciculatus_F_contig15090.3610.1 ID=prot_E-fasciculatus_F_contig15090.3610.1|Name=mRNA_E-fasciculatus_F_contig15090.3610.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=195bp MISPYFGGLSTKHGYRKVLMVASGLIALGALAYSLAWNTAALIGAQIIMGback to top mRNA from alignment at E-fasciculatus_F_contig15090:337..2707+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15090.3610.1 ID=mRNA_E-fasciculatus_F_contig15090.3610.1|Name=mRNA_E-fasciculatus_F_contig15090.3610.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2371bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15090:337..2707+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15090:337..2707+ >mRNA_E-fasciculatus_F_contig15090.3610.1 ID=mRNA_E-fasciculatus_F_contig15090.3610.1|Name=mRNA_E-fasciculatus_F_contig15090.3610.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1170bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15090:337..2707+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |