mRNA_E-fasciculatus_F_contig1509.3608.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1509.3608.1
Unique NamemRNA_E-fasciculatus_F_contig1509.3608.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1509.3608.1 vs. uniprot
Match: D8LLH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLH0_ECTSI)

HSP 1 Score: 536 bits (1380), Expect = 3.510e-188
Identity = 272/287 (94.77%), Postives = 281/287 (97.91%), Query Frame = 1 
Query:    1 MARALASCWMMVSLVPGACFLVPTNSRAALHSAGGRQLGRGYRDQKPSSRQPRNTATGRREVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLDGATEGCSIAVNGVCLTVTSFDDEEFRVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQERWFTFMLVAYTQQHVVIPKKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALEDWQETA 861
            MAR LAS W++VSLVPGACFLVPTNSRAALHSAG RQLG+GYRDQ+PSSRQPRNTA GRREVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVL+GATEGCSIAVNGVCLTVTSF+D+EF+VGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQE WFTFMLVAYTQQHVVIPKKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALEDW+E A
Sbjct:    1 MARVLASSWVIVSLVPGACFLVPTNSRAALHSAGRRQLGQGYRDQQPSSRQPRNTAAGRREVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLEGATEGCSIAVNGVCLTVTSFNDDEFKVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQECWFTFMLVAYTQQHVVIPKKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALEDWREWA 287
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BLAST of mRNA_E-fasciculatus_F_contig1509.3608.1 vs. uniprot
Match: A0A835Z1K1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1K1_9STRA)

HSP 1 Score: 351 bits (901), Expect = 8.650e-115
Identity = 185/284 (65.14%), Postives = 219/284 (77.11%), Query Frame = 1 
Query:  175 RREVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLDGATEGCSIAVNGVCLTVTSFDDEEFRVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQERWFTFMLVAYTQQHVVIPKKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALEDWQETADRKLASSK-DGAKASE--------DVDFKIRHVEHKVKNRDMVLDVIENRLARLE 999
            RR V+RAMFSGIVEE G+V SL +N  +KLWDGS G GVELT+ A   L+GA+ GCSIAVNGVCLTVT FD+E+FRVGLAPETLRRSNL DL AGD VNLERAL   GRNSGHFVQGHVD+VGTI +   + DSL V+V  P++L+RYI PKGFIA+DGTSLTVCEVN  E WFTFMLVAYTQ H+V+P K+ GDKVN+EVDVLGKY+ERSL+SVLDRL ALE    TA    A  K +GA+A           V++++  VEHKV +RD+V+D +E RL  +E
Sbjct:   58 RRAVIRAMFSGIVEEKGTVKSLERNSAIKLWDGSVGEGVELTIAAKVALEGASLGCSIAVNGVCLTVTDFDEEQFRVGLAPETLRRSNLRDLAAGDAVNLERALASGGRNSGHFVQGHVDDVGTIAAFTPEGDSLWVRVSAPRELMRYIVPKGFIAIDGTSLTVCEVNAAEAWFTFMLVAYTQAHIVLPGKAVGDKVNIEVDVLGKYVERSLASVLDRLDALE----TAAAAAAPPKAEGARAXXXXXPAAEGSVEYRLGAVEHKVTSRDLVIDSVEARLRTIE 337
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BLAST of mRNA_E-fasciculatus_F_contig1509.3608.1 vs. uniprot
Match: A0A6V1VK25_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VK25_HETAK)

HSP 1 Score: 305 bits (780), Expect = 1.240e-97
Identity = 157/231 (67.97%), Postives = 182/231 (78.79%), Query Frame = 1 
Query:  154 PRNTATGRREVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKAN-TVLDGATEGCSIAVNGVCLTVTSFDDEEFRVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQERWFTFMLVAYTQQHVVIPKKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALE 843
            PR ++T   +V R MFSGIVEEMG V SL +   +K+WDGS G+G EL ++++ TVLDGA +G SIAVNGVCLTV  FDD+ FRVGLAPETLRRSNL  L AG  VNLERAL  D RNSGHFVQGHVD  GTIL +  + DSL VKV V ++L+RYI PKGFIA+DGTSLTVCE N  E WF FMLVAYTQ+H++IP KS GDKVN+EVDVLGK +ERSL +VLDRL ALE
Sbjct:   34 PRASST---QVPRMMFSGIVEEMGIVRSLEEKTDMKMWDGSTGSGTELCIESDGTVLDGAYDGASIAVNGVCLTVIEFDDKSFRVGLAPETLRRSNLPLLEAGQRVNLERALAADARNSGHFVQGHVDETGTILELRPEGDSLWVKVGVSRELMRYIVPKGFIAIDGTSLTVCETNVAEGWFNFMLVAYTQKHIIIPSKSLGDKVNVEVDVLGKLVERSLGNVLDRLDALE 261
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BLAST of mRNA_E-fasciculatus_F_contig1509.3608.1 vs. uniprot
Match: A0A7S3AZ04_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AZ04_9EUKA)

HSP 1 Score: 296 bits (759), Expect = 6.450e-95
Identity = 150/218 (68.81%), Postives = 171/218 (78.44%), Query Frame = 1 
Query:  190 RAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLDGATEGCSIAVNGVCLTVTSFDDEEFRVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQERWFTFMLVAYTQQHVVIPKKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALE 843
            RAMFSGIVEEMG++  L K D + LWDGS G G E+ V+A+ VL  A+ GCSIAVNGVCLTVT FD+  F VGLAPET+RRSNL  L+ GD VNLERALP DGRNSGHFVQGHVD+VG +  +  D DSL VKV  P  L+ YI PKGFIAVDGTSLTVCEVN  E WF FMLVAYTQQ ++IPKK  GD VNLEVDV+ KY+E+S++SVL RL ALE
Sbjct:   16 RAMFSGIVEEMGTIRRLEKVDGLTLWDGSVGEGWEMEVEASEVLGQASLGCSIAVNGVCLTVTEFDEGSFSVGLAPETIRRSNLVKLKTGDPVNLERALPADGRNSGHFVQGHVDDVGILEELLPDGDSLFVKVRPPARLLPYIVPKGFIAVDGTSLTVCEVNYTEGWFNFMLVAYTQQKIIIPKKKVGDPVNLEVDVISKYVEKSMASVLARLDALE 233
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BLAST of mRNA_E-fasciculatus_F_contig1509.3608.1 vs. uniprot
Match: A0A8J6CDG9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDG9_DIALT)

HSP 1 Score: 294 bits (753), Expect = 1.980e-93
Identity = 156/258 (60.47%), Postives = 189/258 (73.26%), Query Frame = 1 
Query:   82 AALHSAGGRQLGRGYRDQKPSSRQPRNTATGRREVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLDGATEGCSIAVNGVCLTVTSFDDEE--FRVGLAPETLRRSNLED--LRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQERWFTFMLVAYTQQHVVIPKKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALE 843
            A + +AG R      R    ++   R+T      + RAMFSGIVEEMG V SL +   +KLWDG+ G+G EL V+ +TVLDGAT+GCSIAVNGVCLTV  FD     FRVGLAPETLRR+NL    L+AGD VNLERALP DGRNSGHFVQGHVD VG ++S+  D DSL V V+ P+ L++YI PKGFIAVDGTSLTVC+V+     F+FML+ YTQQHVVIP+KS G  VNLE DV+GKY+ERSL+ + +R+ ALE
Sbjct:   12 ALMPAAGWRPAAAAMRGSAVAATMRRSTRAPAASLPRAMFSGIVEEMGRVESLAERTDMKLWDGTIGSGWELAVRGSTVLDGATQGCSIAVNGVCLTVVDFDAGSGVFRVGLAPETLRRTNLNPAALKAGDAVNLERALPADGRNSGHFVQGHVDAVGELVSLTPDGDSLWVVVKAPRSLMKYIVPKGFIAVDGTSLTVCDVDYAASTFSFMLIGYTQQHVVIPQKSAGLTVNLEADVIGKYVERSLAGLSERVAALE 269
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BLAST of mRNA_E-fasciculatus_F_contig1509.3608.1 vs. uniprot
Match: B7G545_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G545_PHATC)

HSP 1 Score: 288 bits (738), Expect = 7.060e-92
Identity = 140/232 (60.34%), Postives = 179/232 (77.16%), Query Frame = 1 
Query:  196 MFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLDGATEGCSIAVNGVCLTVTSFDDEE--FRVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQERWFTFMLVAYTQQHVVIPKKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALEDWQETADRKLASSK 885
            MF+GIVEEMG V SL + D + LWDG++G+G ELTVKA+ +++GA  GCSI V+GVCLT T  D +E  FRVGLAPET+RR+ L DL+ GD VNLERA  + GRNSGHFVQGHVD+ G I+    DEDSL  K++V  D++ YI PKGFIA+DGTSLTVCEV+ QE+WFTFMLV YTQ+ +++P K  GD+VNLEVDVLGKY E +L++++ RL ALE   E+ ++ L + K
Sbjct:    1 MFTGIVEEMGEVVSLTQRDDMPLWDGTKGSGTELTVKASIMMEGAYLGCSICVSGVCLTATELDYDESIFRVGLAPETIRRTYLGDLKTGDAVNLERASEIGGRNSGHFVQGHVDDTGEIIDRWTDEDSLFFKIKVTPDVLAYIVPKGFIAIDGTSLTVCEVDYQEKWFTFMLVEYTQKKIIVPAKKVGDRVNLEVDVLGKYSENALAALIPRLEALEAKVESLEKALVAGK 232
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BLAST of mRNA_E-fasciculatus_F_contig1509.3608.1 vs. uniprot
Match: A0A0M0JSD6_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JSD6_9EUKA)

HSP 1 Score: 286 bits (731), Expect = 5.670e-91
Identity = 143/216 (66.20%), Postives = 167/216 (77.31%), Query Frame = 1 
Query:  196 MFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLDGATEGCSIAVNGVCLTVTSFDDEEFRVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQERWFTFMLVAYTQQHVVIPKKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALE 843
            MFSGIVEEMG V+ L K  ++K WDG+ G G EL V+A   L+GA+ GCSIAVNGVCLTVT FD  +F+VGLAPET+RR+NLE L  GD VN+ERALP DGRNSGHFVQGHVD++G I  +  D DSL V+V  P  L+ YI PKGFIA+DGTSLTVC VN  E WF FML+A+TQQ VVIPKK+ GD VNLEVDVL KY+E+ L +V  RL ALE
Sbjct:    1 MFSGIVEEMGKVSKLDKVPRLKQWDGTVGEGWELEVEATVALEGASLGCSIAVNGVCLTVTEFDKHKFKVGLAPETIRRTNLERLVPGDPVNVERALPADGRNSGHFVQGHVDDIGIIEELRPDGDSLWVRVRPPARLMPYIVPKGFIAIDGTSLTVCNVNAAEGWFDFMLIAFTQQKVVIPKKAVGDAVNLEVDVLAKYVEQGLKAVTARLDALE 216
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BLAST of mRNA_E-fasciculatus_F_contig1509.3608.1 vs. uniprot
Match: A0A6T6GBW6_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6GBW6_9STRA)

HSP 1 Score: 285 bits (730), Expect = 3.540e-90
Identity = 145/241 (60.17%), Postives = 180/241 (74.69%), Query Frame = 1 
Query:  160 NTATGRREVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLDGATEGCSIAVNGVCLTVTS--FDDEEFRVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQERWFTFMLVAYTQQHVVIPKKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALEDWQETADRKLA 876
            NTA G       MF+GIVEEMGSV SL + D + LWDG++G G ELTVK   V+DGA  GCSI VNGVCLT T   FD+  FRVGLAPETLRR+   DL+AG+ +NLERA  + GRNSGHFVQGHVD VGT++    DEDSL  KV+V  ++++YI PKGFIA+DGTSLTV EVN QE+WFTFMLV YTQ+ ++IP K    K+N+EVDVLGKY E +L++++ RL ALE   E+ +++LA
Sbjct:   31 NTACG-------MFTGIVEEMGSVVSLEERDDMMLWDGTKGKGTELTVKGEVVMDGAYLGCSICVNGVCLTATELDFDNNVFRVGLAPETLRRTYFTDLQAGEPLNLERASEIGGRNSGHFVQGHVDGVGTVIDRWQDEDSLFYKVQVDANILKYIVPKGFIAIDGTSLTVVEVNAQEKWFTFMLVDYTQKKIIIPSKMVDGKLNIEVDVLGKYSENALAALIPRLEALEAKVESLEKELA 264
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BLAST of mRNA_E-fasciculatus_F_contig1509.3608.1 vs. uniprot
Match: A0A7S3SZI5_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SZI5_9SPIT)

HSP 1 Score: 284 bits (726), Expect = 4.200e-90
Identity = 139/218 (63.76%), Postives = 167/218 (76.61%), Query Frame = 1 
Query:  190 RAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLDGATEGCSIAVNGVCLTVTSFDDEEFRVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQERWFTFMLVAYTQQHVVIPKKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALE 843
            R +FSGIVEE+G V  L K   + LWDGS G GVE+ V A+TVL+GA EGCSIAVNGVCLTVT FDD+    GLAPETLRR+NL     G  VNLERALP DGRNSGHFVQGHVD+VG I SM  D ++L V++  P  L++YI PKGFI VDGTSLTVCE +  + WF FMLVAYTQQH+ +PKK  G++VNLEVDV+ KY+ERS+ +++DR+  LE
Sbjct:    2 RCVFSGIVEEIGEVVRLEKRGDLTLWDGSVGEGVEMEVAASTVLEGAYEGCSIAVNGVCLTVTKFDDKTACFGLAPETLRRTNLHAAGPGTLVNLERALPADGRNSGHFVQGHVDDVGVIESMTPDGEALTVRIRPPAHLMKYIVPKGFICVDGTSLTVCEADPGKGWFDFMLVAYTQQHIALPKKKVGEQVNLEVDVMAKYVERSVGALVDRVAELE 219
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BLAST of mRNA_E-fasciculatus_F_contig1509.3608.1 vs. uniprot
Match: A0A7S3PVE8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVE8_9STRA)

HSP 1 Score: 285 bits (728), Expect = 1.020e-89
Identity = 139/231 (60.17%), Postives = 180/231 (77.92%), Query Frame = 1 
Query:  196 MFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLDGATEGCSIAVNGVCLTVTSFDDEEFRVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQ--ERWFTFMLVAYTQQHVVIPKKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALEDWQETADRKLASS 882
            MF+GIVEEMG+V  L + D + LWDGS+G+G ELTVK N VLDGA  GCSI VNGVCLT T  ++E F+VGLAPETLRR+ L +L++GD VNLERA  + GRNSGHFVQGHVD VGTI+    DEDSL  KV+V  +L+RYI  KGF+A+DGTSLTVCEVN++  E WFTFMLV YTQ+ ++IP+K  G+ +N+EVDVLGKY E +L++++ R+  LE   ++ + +LA++
Sbjct:   42 MFTGIVEEMGTVIKLEERDDMTLWDGSKGSGTELTVKGNIVLDGAYLGCSICVNGVCLTATELEEEFFKVGLAPETLRRTYLGELKSGDFVNLERASEIGGRNSGHFVQGHVDGVGTIIDRWIDEDSLFFKVKVEPELLRYIVAKGFVAIDGTSLTVCEVNSRLDESWFTFMLVEYTQKKIIIPQKKVGELLNIEVDVLGKYSESALAAIIPRIEELESKVKSLEEQLANA 272
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1509.3608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLH0_ECTSI3.510e-18894.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z1K1_9STRA8.650e-11565.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1VK25_HETAK1.240e-9767.97Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3AZ04_9EUKA6.450e-9568.81Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A8J6CDG9_DIALT1.980e-9360.47Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
B7G545_PHATC7.060e-9260.34Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A0M0JSD6_9EUKA5.670e-9166.20Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A6T6GBW6_9STRA3.540e-9060.17Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S3SZI5_9SPIT4.200e-9063.76Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7S3PVE8_9STRA1.020e-8960.17Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1509contigE-fasciculatus_F_contig1509:4101..9204 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score536.2
Seed ortholog evalue1.1e-149
Seed eggNOG ortholog2880.D8LLH0
Preferred nameRIB5
KEGG rclassRC00958,RC00960
KEGG koko:K00793,ko:K22382
KEGG ReactionR00066
KEGG Pathwayko00740,ko01100,ko01110,map00740,map01100,map01110
KEGG ModuleM00125
GOsGO:0003674,GO:0003824,GO:0004746,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.riboflavin synthase activity
EggNOG OGsCOG0307@1,KOG3310@2759
EC2.5.1.9
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04121
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionRiboflavin synthase, putative
Ec32 orthologEc-00_004570.1
Exons7
Model size1512
Cds size1026
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1509.3608.1prot_E-fasciculatus_F_contig1509.3608.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1509 4587..9204 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927987.48181-UTR-E-fasciculatus_F_contig1509:4100..45861622927987.48181-UTR-E-fasciculatus_F_contig1509:4100..4586Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1509 4101..4586 -
1695995779.5585415-UTR-E-fasciculatus_F_contig1509:4100..45861695995779.5585415-UTR-E-fasciculatus_F_contig1509:4100..4586Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1509 4101..4586 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927987.57565-CDS-E-fasciculatus_F_contig1509:4586..47571622927987.57565-CDS-E-fasciculatus_F_contig1509:4586..4757Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1509 4587..4757 -
1695995779.572451-CDS-E-fasciculatus_F_contig1509:4586..47571695995779.572451-CDS-E-fasciculatus_F_contig1509:4586..4757Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1509 4587..4757 -
1622927987.5865538-CDS-E-fasciculatus_F_contig1509:5626..57581622927987.5865538-CDS-E-fasciculatus_F_contig1509:5626..5758Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1509 5627..5758 -
1695995779.5827541-CDS-E-fasciculatus_F_contig1509:5626..57581695995779.5827541-CDS-E-fasciculatus_F_contig1509:5626..5758Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1509 5627..5758 -
1622927987.5975204-CDS-E-fasciculatus_F_contig1509:6340..64751622927987.5975204-CDS-E-fasciculatus_F_contig1509:6340..6475Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1509 6341..6475 -
1695995779.6011794-CDS-E-fasciculatus_F_contig1509:6340..64751695995779.6011794-CDS-E-fasciculatus_F_contig1509:6340..6475Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1509 6341..6475 -
1622927987.6161678-CDS-E-fasciculatus_F_contig1509:6732..69181622927987.6161678-CDS-E-fasciculatus_F_contig1509:6732..6918Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1509 6733..6918 -
1695995779.6093252-CDS-E-fasciculatus_F_contig1509:6732..69181695995779.6093252-CDS-E-fasciculatus_F_contig1509:6732..6918Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1509 6733..6918 -
1622927987.6272547-CDS-E-fasciculatus_F_contig1509:7488..77181622927987.6272547-CDS-E-fasciculatus_F_contig1509:7488..7718Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1509 7489..7718 -
1695995779.6173818-CDS-E-fasciculatus_F_contig1509:7488..77181695995779.6173818-CDS-E-fasciculatus_F_contig1509:7488..7718Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1509 7489..7718 -
1622927987.6616924-CDS-E-fasciculatus_F_contig1509:8412..85351622927987.6616924-CDS-E-fasciculatus_F_contig1509:8412..8535Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1509 8413..8535 -
1695995779.625916-CDS-E-fasciculatus_F_contig1509:8412..85351695995779.625916-CDS-E-fasciculatus_F_contig1509:8412..8535Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1509 8413..8535 -
1622927987.7889884-CDS-E-fasciculatus_F_contig1509:9155..92041622927987.7889884-CDS-E-fasciculatus_F_contig1509:9155..9204Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1509 9156..9204 -
1695995779.6359253-CDS-E-fasciculatus_F_contig1509:9155..92041695995779.6359253-CDS-E-fasciculatus_F_contig1509:9155..9204Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1509 9156..9204 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1509.3608.1

>prot_E-fasciculatus_F_contig1509.3608.1 ID=prot_E-fasciculatus_F_contig1509.3608.1|Name=mRNA_E-fasciculatus_F_contig1509.3608.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=342bp
MARALASCWMMVSLVPGACFLVPTNSRAALHSAGGRQLGRGYRDQKPSSR
QPRNTATGRREVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELT
VKANTVLDGATEGCSIAVNGVCLTVTSFDDEEFRVGLAPETLRRSNLEDL
RAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVP
QDLIRYIAPKGFIAVDGTSLTVCEVNNQERWFTFMLVAYTQQHVVIPKKS
KGDKVNLEVDVLGKYIERSLSSVLDRLGALEDWQETADRKLASSKDGAKA
SEDVDFKIRHVEHKVKNRDMVLDVIENRLARLEAAEKKKKA*
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mRNA from alignment at E-fasciculatus_F_contig1509:4101..9204-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1509.3608.1 ID=mRNA_E-fasciculatus_F_contig1509.3608.1|Name=mRNA_E-fasciculatus_F_contig1509.3608.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5104bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1509:4101..9204- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCGCGGGCGTTAGCATCGTGCTGGATGATGGTGTCATTGGTTCCAGG
TGTGATGTTCAAACGTTCAAACTAAATACAGCAGTGTTCCTGTTGGTGCC
CAAGTTGACGTAATGCATGCTACATGTGGCGTCAATGGCAGATACTTCGC
ACTTCGAGGGTAACGCGTGTTGCGCGATCCGGGATGCGCCACAGCCGTAG
CAGTCCGGGATTCATGACCACAGGAAGGTGATACATAATCACGAACGATG
CGAGTTTGTTCGATTTTCGCACAGGTATCCGAGTTACCGCACACCTATCC
TACATGTATGTATGTAGTTGGGATGCTTGACACGGTAAACAACTAGGCCT
GCTGTTTACTGCTGTCTGCGTGCAGTGCATACATAAACCAGAACTAAGCC
CAGCCCTGCTCAAAGAACCAAACGCACTCAAGTCCATCCCTTTATGCCAC
ACCATGACATATTTCTTCATTAGAACAACATACCCCAAGTCTTGTTTCAC
TTGCTAAAACTAGGGTTTCACGACATTTTTAGACCACATCTACGACGCGT
TGGAAACAGCAGCAGCAACGCCTGTAGCAAGCTGTAGCTTTTGTCCGTAG
ATTTTTCTCTGCATCTGTTTCACCCAACGTTTCACCAGAGACAGCACCTC
GTGATTGGATCAATCGCAGGGGCATGCTTCCTGGTGCCGACAAACTCGAG
AGCTGCGCTGCACTCAGCGGGGGGCCGCCAGCTCGGGCGAGGGTACCGAG
ATCAGAAGCCGTCCTCGCGGCAACCTCGAAACACAGCAACAGGTGAGCAA
AACACAACGAAAACTGATGGTCTGCAAATTGTTGTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTCTTCACATTAAAAATCGTTCCGGTCTCCTCTC
AGTACCTTCTATTGTCCGTACTGGTCCAACTGACGCGGACGCCGTCCGTG
GTCACAAGCCAACTACTACTGCCCCAAAGGGTGCATACCACAATTCAGTA
CCTTCTATTGTCCGTACTGGTCCAACTGACGCGGACGCCTTCCGTGGTCA
CAAGCCAACTACTACTGCCCCAAAGGGTGCATACCACAATTCCAACGTAC
CACTCTGCAGGCACGGGCTTTGTACGGCCTCCCCCCCGGTTGTCGCAAAG
TACGTTTTCCCTCTGGCACTCTGGCACACGTGAGATGTTGGTAGATGCAT
CACCGCCGCCGGCGGCAGCAGCAGTTGCGGTCGCAGAACTAGCAAACCTA
GGTAGCACGCCCGGCGCTAAAACGTTGTTTCTTTCCGCGAAGAACACGCG
GCTTCAACACACACGCTTTGTGCGAGAGCCAGGATGTAGAATCGTTCCCA
TCTTGCTCTGCAGGATAGGGGCCCGCTTGTTCAGACAACAATATGAACGG
ACCCCGCCCCGACTCTCACGCCGTTGCAACGGTACGTGCGGTCTACTTTC
TTCGTTCCTCTTTCGCGTGGCGCAACCCGCGCGCAGGGCGACGAGAAGTC
GTGCGAGCTATGTTCTCGGGCATCGTGGAGGAAATGGGATCGGTAGCCTC
GCTCGTAAAGAACGACAAGGTCAAGCTCTGGGACGGATCGGAGGGGGCCG
GGGTCGAGCTCACCGTCAAGGCGAACACCGTCCTGGATGGAGCGACGGAA
GGGTGCAGCATTGCCGTCAATGGTGTTTGTCTGACCGTCACCTCCTTCGA
CGACGAGGAGTTCAGGGTAAGCAGCTGGAGTCTCCAGACAACCGTTGGTG
ACGAAAGCCACCAGACCCGTTTGACAACAGTTTTGGATCAATACTACTGT
CACGCGGGTGTGATAGTCTGTATTTCAACCCACAGACTGCGAGGGCTTGA
CGTTTTGTTTTTGTTCATGTTTTTTTCGTCCAACAGGGCATATAGATCAG
TGCACTCAGTTTTCTGATGAGAGATTCCGCTCAGGCGACATCGCATGATG
CTCACCACCTGCTACCCCAAGTGTTTGTATAAATGCCTTCGGATGCACAA
CACAGGATGCTCACCACCTGCTACCCAAGTCTTTGTATGCATGCCTTCCC
CGTTACATAATCTTCTTCTTTCCGAATGTGATCATGAGAGACGGTATCTG
GTAGCGCTTTCATGCACACCACAGGATGATCACCACAAGCATACCCCAAG
TGACACCACAGAATGATCACCACAAGCATACCCCAAGTGTCTGTGTGCAT
GCCTTCCCCGTACGCAATACTCTTCTTGTCCAATGTGATAATGAGAGACT
CGCTTCGATCGCGATGCACCGGCGAATAAATAAAAGGTGGGCCTCGCGCC
CGAGACCCTCCGGAGATCAAACCTGGAAGACTTGAGAGCGGGGGACGGGG
TCAACCTTGAGAGGGCCCTGCCGGTGGACGGCCGAAACAGCGGCCATTTC
GTGCAGGGGCACGTGGACAACGTCGGGACCATTCTGAGCATGGAGGCCGA
CGAGGACTCGCTCGTCGTCAAGGTGTGAACCACCGCGTTTGATGGAAGCG
GCCGCCGGCGGATGTGCCTGTGAGGGAGCAGTCCACAAAGCGCAGCCGTT
ATGATGTGCTTCATGGAGTTGTCAATCTCTAGCCCCCCGTTCCCAACGAG
ACCTTCCTTCATGCATTGGCCCAGAACCCCGTCGGTCCTGGGTTTCCCCT
GGGTGTCATGCGCTAATCCCGGCTATGCTGTTCTTACGCGCAGTCACGAC
GCCGCGATTGTCGTATCATGTGTACACAGGTGGAAGTTCCCCAGGACTTG
ATTAGATATATCGCCCCGAAGGGCTTCATCGCGGTGGATGGCACCAGCCT
CACGGTGTGCGAAGTCAACAACCAAGAGCGCTGGTTCACCTTCATGCTGG
TGGCCTACACGCAGGTAGGTACCTAGTCCCCGATGCTGTGCTACACTTGC
ATGCTCTCGTGCACATGTGGTAGATAGCGCCGGAGTATTTTGTACCTGTA
GGCAACCTTGGTTGGCGAACCAGCGTGTTTCACCCTTGGTTGGCGAACCA
GCGTGTTGTTCGCGAATGACTTGGCTATCCGCCTGAGAGCACTACGTAAC
TGCGGTGTGTGGAGTCTCAACAGCCCAATTGGGGCGGGAATAAGAATGGC
CGATCGGGACACATGATGACTTGCACGCAGTGTTGCGGTGTTTTGGAACG
GGCTTTTGCTTCGGATTCGTGGCATCCACTAGGGATTGTCAAGCCTAACC
GACTGACGTCTACCGAACCACCCAGATGCAACGCTGCAGGTGTTCATCGC
AGTTTTGTCCGTACCGGCCATCCAATATCGATCCACAATGGCCCGAATGA
TCGACAAGGTTAACGTTGGAAGCAGTGCCTACCATGTGAACAAGTGATAC
GGACACCACGCCGACACCTTGCGTTCGTTCGCGTCCTTGTCAATGACCCC
GCCCCCGCTTTCCCCATCCCTTTGTCCCCTCCACCCCCGGGGGCAGCAAC
ATGTCGTGATTCCGAAGAAGAGCAAAGGGGACAAGGTTAACCTCGAGGTG
GACGTGTTGGGCAAGTACATCGAGCGATCTTTGTCGTCGGTACTCGACCG
ACTAGGGGCCCTCGAAGACTGGCAAGAGGTCAGTACACCTTATACTACTG
CTGTGTGTAGTCCGCTTCGTCCAAGTACGGCACGTTCAAGACCACCTACT
TACATCTCTCGGTGTACCCTGCTGTTTCTGTGCGCGCAATTGTGGATTTG
AAAGTCGGCGGACGGAGCGTGGTACTCGAAGCACGATGTTGGCCATACCC
CCTGCCTCTGCCCTCGTGCTGTCCTTTTGACAACAAGTGCAGGCCCAGAG
ATGATAGGCATTGCATGAAAGGGCGGCCCATGAGAAACTGGGTTGCTCAC
CCGAGCCCGGTCACCAAGCAACTACTTCTATAAGCTCATCGCGGCACGTT
GGTTGATTCCAAGGCCAACCAACAAATCTTACGCGTGTCGCGTGTCGGTT
GTTGTATGCGTAGCGTTTCACTCGCTTTCCCCGTGTTTTTTTTTTTCTCC
GAAAGTATCTGGTCGTTTGTGGGGGCAAAGGGTACCCTGGATATACAAAG
GAGAGCCAGGACATGGCAGTATTTTCCCACTACTGGGGGCAAGTTGTCTT
TGTTTCGTGACATGTGGCAAAGAGCAAGTCCAGACGAGAGAGAGGGAGAT
AGAGCGCGGGCCAGGGTGGTAGTGGAAAGACTTTCCGCTCCTCGCCTCTT
GTAAGCAAGTAGCCCAGTAGCCCTTGAAGAGTCGAAAATGGTCGAATCCA
CTGCAGCGGGTTTCTTGTTGCCCAACGATCAACAAGATTCATTCCGCACC
CACCCACGTATTCTTGAAATTCGTAGACTATTGCCACAGCGTGGTGAACA
CTTCATCTCTACCTCTTTCGTCCACTCGTTCGTGTTGCCGGCTTACGCAC
ACACACGTCGTGTGCCGCTGCCTGCTGCCCGTGCGCTCTTGATTCAGACC
GCGGATCGGAAGCTCGCTTCCTCAAAGGACGGGGCAAAAGCCTCCGAGGA
TGTAGACTTCAAGATCCGCCACGTGGAGCACAAAGTCAAAAACCGCGACA
TGGTCTTGGACGTTATCGAGAACAGGCTGGCCCGCCTAGAGGCCGCAGAG
AAGAAGAAGAAGGCGTAAAAGTTCTTCCGTGATGTGTGGAGCCTCTGCTG
ATTTAGAGTAGGACCGTTATATGCATAGGTTGGTGTACGTACGTGAAGTG
GGTCTGTTTCTCACGCAAAGAAAGCTGCATGAACGAATATACTGAAAGCC
ATACGAGTCTCGTTATCCGCCAATTTTGATCAAGGACCGAGGGTTGCCGT
ACAGCACTGCTGCTATGTACAGGTACTTTACGCGTAGCAGAAGATAGGCC
GTAATTTTTTCTTCTTGCACTATATGCTGAGAAATAAACATGCTTCTGGA
GGCAATTTGTACATGAGGAATTTCAATTTTGCGAAGTATCCCCCCCCTCG
CGATAAAACGGTGAAACCACCGAGACAGGAGCGACTTCGCCGTCCGCCCT
CTTCTTCCTCCATGGTTGAATTGATTGAAGAAGGCGATCGTCCGTCGAGG
CGATTGGGAAAAAGACAGAAACCGCCCCATTTCCGGCGAGGACTGATGAG
GGGG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1509:4101..9204-

>mRNA_E-fasciculatus_F_contig1509.3608.1 ID=mRNA_E-fasciculatus_F_contig1509.3608.1|Name=mRNA_E-fasciculatus_F_contig1509.3608.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2052bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1509:4101..9204- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCGCGGGCGTTAGCATCGTGCTGGATGATGGTGTCATTGGTTCCAGA
TGGCGCGGGCGTTAGCATCGTGCTGGATGATGGTGTCATTGGTTCCAGGG
GCATGCTTCCTGGTGCCGACAAACTCGAGAGCTGCGCTGCACTCAGCGGG
GGGCCGCCAGCTCGGGCGAGGGTACCGAGATCAGAAGCCGTCCTCGCGGC
AACCTCGAAACACAGCAACAGGGGCATGCTTCCTGGTGCCGACAAACTCG
AGAGCTGCGCTGCACTCAGCGGGGGGCCGCCAGCTCGGGCGAGGGTACCG
AGATCAGAAGCCGTCCTCGCGGCAACCTCGAAACACAGCAACAGGGCGAC
GAGAAGTCGTGCGAGCTATGTTCTCGGGCATCGTGGAGGAAATGGGATCG
GTAGCCTCGCTCGTAAAGAACGACAAGGTCAAGCTCTGGGACGGATCGGA
GGGGGCCGGGGTCGAGCTCACCGTCAAGGCGAACACCGTCCTGGATGGAG
CGACGGAAGGGTGCAGCATTGCCGTCAATGGTGTTTGTCTGACCGTCACC
TCCTTCGACGACGAGGAGTTCAGGGGCGACGAGAAGTCGTGCGAGCTATG
TTCTCGGGCATCGTGGAGGAAATGGGATCGGTAGCCTCGCTCGTAAAGAA
CGACAAGGTCAAGCTCTGGGACGGATCGGAGGGGGCCGGGGTCGAGCTCA
CCGTCAAGGCGAACACCGTCCTGGATGGAGCGACGGAAGGGTGCAGCATT
GCCGTCAATGGTGTTTGTCTGACCGTCACCTCCTTCGACGACGAGGAGTT
CAGGGTGGGCCTCGCGCCCGAGACCCTCCGGAGATCAAACCTGGAAGACT
TGAGAGCGGGGGACGGGGTCAACCTTGAGAGGGCCCTGCCGGTGGACGGC
CGAAACAGCGGCCATTTCGTGCAGGGGCACGTGGACAACGTCGGGACCAT
TCTGAGCATGGAGGCCGACGAGGACTCGCTCGTCGTCAAGGTGGGCCTCG
CGCCCGAGACCCTCCGGAGATCAAACCTGGAAGACTTGAGAGCGGGGGAC
GGGGTCAACCTTGAGAGGGCCCTGCCGGTGGACGGCCGAAACAGCGGCCA
TTTCGTGCAGGGGCACGTGGACAACGTCGGGACCATTCTGAGCATGGAGG
CCGACGAGGACTCGCTCGTCGTCAAGGTGGAAGTTCCCCAGGACTTGATT
AGATATATCGCCCCGAAGGGCTTCATCGCGGTGGATGGCACCAGCCTCAC
GGTGTGCGAAGTCAACAACCAAGAGCGCTGGTTCACCTTCATGCTGGTGG
CCTACACGCAGGTGGAAGTTCCCCAGGACTTGATTAGATATATCGCCCCG
AAGGGCTTCATCGCGGTGGATGGCACCAGCCTCACGGTGTGCGAAGTCAA
CAACCAAGAGCGCTGGTTCACCTTCATGCTGGTGGCCTACACGCAGCAAC
ATGTCGTGATTCCGAAGAAGAGCAAAGGGGACAAGGTTAACCTCGAGGTG
GACGTGTTGGGCAAGTACATCGAGCGATCTTTGTCGTCGGTACTCGACCG
ACTAGGGGCCCTCGAAGACTGGCAAGAGCAACATGTCGTGATTCCGAAGA
AGAGCAAAGGGGACAAGGTTAACCTCGAGGTGGACGTGTTGGGCAAGTAC
ATCGAGCGATCTTTGTCGTCGGTACTCGACCGACTAGGGGCCCTCGAAGA
CTGGCAAGAGACCGCGGATCGGAAGCTCGCTTCCTCAAAGGACGGGGCAA
AAGCCTCCGAGGATGTAGACTTCAAGATCCGCCACGTGGAGCACAAAGTC
AAAAACCGCGACATGGTCTTGGACGTTATCGAGAACAGGCTGGCCCGCCT
AGAGGCCGCAGAGAAGAAGAAGAAGGCGTAAACCGCGGATCGGAAGCTCG
CTTCCTCAAAGGACGGGGCAAAAGCCTCCGAGGATGTAGACTTCAAGATC
CGCCACGTGGAGCACAAAGTCAAAAACCGCGACATGGTCTTGGACGTTAT
CGAGAACAGGCTGGCCCGCCTAGAGGCCGCAGAGAAGAAGAAGAAGGCGT
AA
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