mRNA_E-fasciculatus_F_contig15082.3606.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15082.3606.1 vs. uniprot
Match: A0A6H5KZL9_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZL9_9PHAE) HSP 1 Score: 503 bits (1295), Expect = 2.510e-166 Identity = 362/432 (83.80%), Postives = 368/432 (85.19%), Query Frame = 1
Query: 4 VDGVSGSYCIGVGVIVDAELGLVVVDRNTVQVSLGDVMLTFNGSEEVAARPVFSHPTQNFGVVQFDPSLVSGSFTAAVLSSRETEHEDQD--QDLEECSDDVE--IDGYCADGNGEKSVGGNAERGDXXXXXXXXXXXXXXXXVSSCDGGKVTADKTAAADATAPTADGDSKGKEEREAPTAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADAPPPLRPGDTAEFYGLTAANAPVRQRAAVVKLERLSLASSAHPQFTAHTVEVLQFDQIASCIGGLFIAVPRSDAASPSPPRTGGDVKDPSPGKRKSVPVVSAFWHSFAFSTTDGRKQTMRGLPAPVVRRAVERLRRDLLLGKAGEEEACSSEEHEIQDKXXXXXD----GQEKRVLAGNDSGVGVDGDPAVEGLDAAGAEAERELA 1275
VDGVSGSYCIGVGVIVDAELGLVVVDRNTVQVSLGDVMLTFNGSEEVAARP+FSHPTQNFGVVQFDPSL+SGSFTAAVLSSRETEHED+D QDL+E DVE D +D NG+ VGGNAE XXXXXXXXXXXXXXXX KVTADKTAAADATA TADGDSK KEEREAPTAGT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PP LRPGD AEFYGLTAANAPVRQRAAVVKLERLSLASSAHPQFTAHTVEVLQFDQIASCIGGLFIAVPRSDAASPSPP TGGD KDPSPGKRKSVPVVSAFWHSFAFSTTDGRKQTMRGLPAPVVRRAVERLRRDLLLGKA XXXXX GQEKRVLA NDSGVGVDG PA E LDAAGAEAER LA
Sbjct: 133 VDGVSGSYCIGVGVIVDAELGLVVVDRNTVQVSLGDVMLTFNGSEEVAARPIFSHPTQNFGVVQFDPSLISGSFTAAVLSSRETEHEDEDKDQDLQEEDSDVEGGDDNVDSDDNGKNCVGGNAEPXXXXXXXXXXXXXXXXXXXXXX---KVTADKTAAADATAATADGDSKDKEEREAPTAGTTATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPP-LRPGDMAEFYGLTAANAPVRQRAAVVKLERLSLASSAHPQFTAHTVEVLQFDQIASCIGGLFIAVPRSDAASPSPPWTGGDAKDPSPGKRKSVPVVSAFWHSFAFSTTDGRKQTMRGLPAPVVRRAVERLRRDLLLGKAAXXXXXXXXXXXXXXXXXXXXXXXXXGQEKRVLADNDSGVGVDGRPAEEDLDAAGAEAERVLA 560
BLAST of mRNA_E-fasciculatus_F_contig15082.3606.1 vs. uniprot
Match: D8LSS8_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSS8_ECTSI) HSP 1 Score: 373 bits (958), Expect = 1.380e-116 Identity = 286/425 (67.29%), Postives = 296/425 (69.65%), Query Frame = 1
Query: 1 QVDGVSGSYCIGVGVIVDAELGLVVVDRNTVQVSLGDVMLTFNGSEEVAARPVFSHPTQNFGVVQFDPSLVSGSFTAAVLSSRETEHEDQD--QDLEE-CSDDVEIDGYCADGNGEKSVGGNAERGDXXXXXXXXXXXXXXXXVSSCDGGKVTADKTAAADATAPTADGDSKGKEEREAPTAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADAPPPLRPGDTAEFYGLTAANAPVRQRAAVVKLERLSLASSAHPQFTAHTVEVLQFDQIASCIGGLFIAVPRSDAASPSPPRTGGDVKDPSPGKRKSVPVVSAFWHSFAFSTTDGRKQTMRGLPAPVVRRAVERLRRDLLLGKAGEEEACSSEEHEIQDKXXXXXD--GQEKRVLAGNDSGVGVDGDPAVEGLDAAGAEA 1260
QVDGVSGSYCIGVGVIVDAELGLVVVDRNTVQVSLGDVMLTFNGSEEVAARP+FSHPTQNFGVV+FDPSLVSGSFTAA+LSSRETEHED+ QDLEE CSD +DG G ++ E+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RAAVVKLERLSLASSAHPQFTAHTVEVLQFDQIASCIGGLFIAVPRSDAASPSPPRTGGD KDPSPGKRKSVPVVSAFWHSFAFST+DGRKQTMRGLPAPVVRRAVERLRRDLLLGKA XXXXX GQEKRVLA NDSGVGVDG PA +GLDAAGAEA
Sbjct: 391 QVDGVSGSYCIGVGVIVDAELGLVVVDRNTVQVSLGDVMLTFNGSEEVAARPIFSHPTQNFGVVKFDPSLVSGSFTAALLSSRETEHEDKXXXQDLEEECSD---VDG----------------------------------------------------------------GDDDVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREAPTRAAVVKLERLSLASSAHPQFTAHTVEVLQFDQIASCIGGLFIAVPRSDAASPSPPRTGGDAKDPSPGKRKSVPVVSAFWHSFAFSTSDGRKQTMRGLPAPVVRRAVERLRRDLLLGKAAAXXXXXXXXXXXXXXXXXXXXXXGQEKRVLADNDSGVGVDGGPAEDGLDAAGAEA 748
BLAST of mRNA_E-fasciculatus_F_contig15082.3606.1 vs. uniprot
Match: A0A7S4DH59_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DH59_HETAK) HSP 1 Score: 82.8 bits (203), Expect = 1.290e-14 Identity = 41/83 (49.40%), Postives = 53/83 (63.86%), Query Frame = 1
Query: 1 QVDGVSGSYCIGVGVIVDAELGLVVVDRNTVQVSLGDVMLTFNGSEEVAARPVFSHPTQNFGVVQFDPSLVSGSFTAAVLSSR 249
DG+S S +GVG++VD GLV VDRNTV ++LGDV++T GS+EV R VF HP N +VQ DP+ V A L+ R
Sbjct: 17 MADGISCSSYLGVGLVVDRAAGLVAVDRNTVPIALGDVLVTVGGSQEVPGRAVFCHPVHNLALVQIDPAAVDQPIAEARLAGR 99
BLAST of mRNA_E-fasciculatus_F_contig15082.3606.1 vs. uniprot
Match: W2KN42_PHYPR (Uncharacterized protein n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KN42_PHYPR) HSP 1 Score: 78.6 bits (192), Expect = 6.760e-13 Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 1
Query: 1 QVDGVSGSYCIGVGVIVDAELGLVVVDRNTVQVSLGDVMLTFNGSEEVAARPVFSHPTQNFGVVQFDPSL---VSGSFTAAVLSSRETE 258
+DG+S S G+GV+VDAE G V+VD+NTV V+LGDV++T S EV A+ VF HP NF +V +DP V+G + L+ + E
Sbjct: 1 MIDGISSSSYHGMGVVVDAEQGFVLVDQNTVPVALGDVLITIAASVEVPAKVVFVHPVHNFSIVHYDPKTLGAVAGHIGSVELAEKPLE 89
BLAST of mRNA_E-fasciculatus_F_contig15082.3606.1 vs. uniprot
Match: A0A7S0IM63_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IM63_9EUKA) HSP 1 Score: 80.9 bits (198), Expect = 6.850e-13 Identity = 42/84 (50.00%), Postives = 56/84 (66.67%), Query Frame = 1
Query: 1 QVDGVSGSYCIGVGVIVDAELGLVVVDRNTVQVSLGDVMLTFNGSEEVAARPVFSHPTQNFGVVQFDPSLVSGSFTAAVLSSRE 252
Q+DGV+G GVG++VDA GLV+VDRNTV VSLG V + F + E+ A VF HPT NF +VQ+D + ++G A+ S E
Sbjct: 237 QIDGVAGLKYSGVGLVVDAARGLVLVDRNTVTVSLGSVRIEFASTVEIPATIVFLHPTHNFALVQYDAAHLAGDSVASATLSNE 320
BLAST of mRNA_E-fasciculatus_F_contig15082.3606.1 vs. uniprot
Match: V9EKA0_PHYPR (Uncharacterized protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=V9EKA0_PHYPR) HSP 1 Score: 78.6 bits (192), Expect = 7.800e-13 Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 1
Query: 1 QVDGVSGSYCIGVGVIVDAELGLVVVDRNTVQVSLGDVMLTFNGSEEVAARPVFSHPTQNFGVVQFDPSL---VSGSFTAAVLSSRETE 258
+DG+S S G+GV+VDAE G V+VD+NTV V+LGDV++T S EV A+ VF HP NF +V +DP V+G + L+ + E
Sbjct: 9 MIDGISSSSYHGMGVVVDAEQGFVLVDQNTVPVALGDVLITIAASVEVPAKVVFVHPVHNFSIVHYDPKTPGAVAGHIGSVELAEKPLE 97
BLAST of mRNA_E-fasciculatus_F_contig15082.3606.1 vs. uniprot
Match: A0A2D7I107_9DELT (Pro-apoptotic serine protease NMA111 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D7I107_9DELT) HSP 1 Score: 81.6 bits (200), Expect = 7.830e-13 Identity = 44/90 (48.89%), Postives = 60/90 (66.67%), Query Frame = 1
Query: 1 QVDGVSGSYCIGVGVIVDAELGLVVVDRNTVQVSLGDVMLTFNGSEEVAARPVFSHPTQNFGVVQFDPSLVSGS-FTAAVLSSRETEHED 267
++DGV G G G++VDA+LGLVVVDR TV +SLGD+ L F GS E++ ++ HP NF VVQ+DPS++ + +A LS E E D
Sbjct: 521 RLDGVHGDRFTGAGLVVDADLGLVVVDRETVPMSLGDLRLIFGGSVELSGELIYLHPEHNFAVVQYDPSMLGETGVRSAQLSEVELESGD 610
BLAST of mRNA_E-fasciculatus_F_contig15082.3606.1 vs. uniprot
Match: A0A0L0DUA8_THETB (Pro-apoptotic serine protease NMA111 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DUA8_THETB) HSP 1 Score: 81.3 bits (199), Expect = 1.040e-12 Identity = 45/83 (54.22%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 1 QVDGVSGSYCIGVGVIVDAELGLVVVDRNTVQVSLGDVMLTFNGSEEVAARPVFSHPTQNFGVVQFDPSLVSGSFTA-AVLSS 246
+DGV S IG G+IVDA GLVVVDR TV +SLGDV ++F S +V A +F HP NF +VQ++PSLV + A A LSS
Sbjct: 523 MIDGVVSSRFIGAGLIVDAARGLVVVDRGTVPISLGDVRISFANSFDVPANVLFLHPIHNFAIVQYEPSLVGSTPVASATLSS 605
BLAST of mRNA_E-fasciculatus_F_contig15082.3606.1 vs. uniprot
Match: V9EK65_PHYPR (Uncharacterized protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=V9EK65_PHYPR) HSP 1 Score: 75.5 bits (184), Expect = 1.380e-12 Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 1 QVDGVSGSYCIGVGVIVDAELGLVVVDRNTVQVSLGDVMLTFNGSEEVAARPVFSHPTQNFGVVQFDPSLV 213
+DG+S S G+GV+VDAE G V+VD+NTV V+LGDV++T S EV A+ VF HP N +VQ+DP +
Sbjct: 70 MIDGISSSSYHGMGVVVDAEQGFVLVDQNTVPVALGDVLITTAASVEVHAKVVFVHPVHNCSIVQYDPKTL 140
BLAST of mRNA_E-fasciculatus_F_contig15082.3606.1 vs. uniprot
Match: A0A485L763_9STRA (Aste57867_17037 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L763_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.470e-12 Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 1
Query: 1 QVDGVSGSYCIGVGVIVDAELGLVVVDRNTVQVSLGDVMLTFNGSEEVAARPVFSHPTQNFGVVQFDPSLVSGSFTAAVLSSRETEH 261
+DG+S S GVG+++DA GLV+VD+NTV ++LGDV++T S E+ AR F HP NF ++Q+DP L+ + + S ET H
Sbjct: 532 MIDGISSSSYNGVGIVIDATAGLVLVDQNTVPIALGDVVVTVAASIEIPARIRFVHPIHNFAIIQYDPKLLGETRLESARLSSETLH 618 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15082.3606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15082.3606.1 >prot_E-fasciculatus_F_contig15082.3606.1 ID=prot_E-fasciculatus_F_contig15082.3606.1|Name=mRNA_E-fasciculatus_F_contig15082.3606.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=425bp QVDGVSGSYCIGVGVIVDAELGLVVVDRNTVQVSLGDVMLTFNGSEEVAAback to top mRNA from alignment at E-fasciculatus_F_contig15082:684..3131+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15082.3606.1 ID=mRNA_E-fasciculatus_F_contig15082.3606.1|Name=mRNA_E-fasciculatus_F_contig15082.3606.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2448bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15082:684..3131+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15082:684..3131+ >mRNA_E-fasciculatus_F_contig15082.3606.1 ID=mRNA_E-fasciculatus_F_contig15082.3606.1|Name=mRNA_E-fasciculatus_F_contig15082.3606.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2550bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15082:684..3131+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |