prot_E-fasciculatus_F_contig1508.3604.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1508.3604.1
Unique Nameprot_E-fasciculatus_F_contig1508.3604.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length112
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1508.3604.1 vs. uniprot
Match: A0A6H5KJJ5_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJJ5_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 1.720e-36
Identity = 72/90 (80.00%), Postives = 75/90 (83.33%), Query Frame = 0 
Query:   15 VFNVTLSEEEARYLYQQLDSDHDGALGAEDLLRGATTVASFFANRQRISKDKVGRQRLGQKSALTRLAERNATLQNGEPICTMSTQFRRR 104
            ++ V LS EEAR LYQQLDSD DGALGAEDLLRGA+TVASFFANRQRISKDK GRQR GQKS L RLAERNATLQN EP   MSTQ R R
Sbjct:    4 MYPVDLSGEEARCLYQQLDSDRDGALGAEDLLRGASTVASFFANRQRISKDKAGRQREGQKSTLARLAERNATLQNDEP---MSTQIRSR 90
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1508.3604.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJJ5_9PHAE1.720e-3680.00EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 33..45
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 20..55
score: 9.827
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 8..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1508contigE-fasciculatus_F_contig1508:9366..10566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1508.3604.1mRNA_E-fasciculatus_F_contig1508.3604.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1508 9366..11051 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1508.3604.1 ID=prot_E-fasciculatus_F_contig1508.3604.1|Name=mRNA_E-fasciculatus_F_contig1508.3604.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=112bp
VLKTTRDFAQTIRRVFNVTLSEEEARYLYQQLDSDHDGALGAEDLLRGAT
TVASFFANRQRISKDKVGRQRLGQKSALTRLAERNATLQNGEPICTMSTQ
FRRRLVLQNGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS