mRNA_E-fasciculatus_F_contig15078.3600.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15078.3600.1 vs. uniprot
Match: D7FNY9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNY9_ECTSI) HSP 1 Score: 113 bits (283), Expect = 7.790e-31 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1
Query: 37 RKQILDQIMTVEARLRLSNIAMVKPDKARRVEEMLIHAATSGKLGGKVTEDQFIQMLEQV 216
RKQILDQIMTVEARLRLSNIAMVKPDKARRVEEMLIHAATSGKLGGKVTEDQFIQMLEQV
Sbjct: 42 RKQILDQIMTVEARLRLSNIAMVKPDKARRVEEMLIHAATSGKLGGKVTEDQFIQMLEQV 101
BLAST of mRNA_E-fasciculatus_F_contig15078.3600.1 vs. uniprot
Match: A0A835Z9S3_9STRA (Double-stranded DNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9S3_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 7.480e-18 Identity = 42/63 (66.67%), Postives = 53/63 (84.13%), Query Frame = 1
Query: 28 QERRKQILDQIMTVEARLRLSNIAMVKPDKARRVEEMLIHAATSGKLGGKVTEDQFIQMLEQV 216
+++R+ ILDQIM EAR RL+NIAMVK DKAR +E+MLI AA GKLGGKV+++QF+QMLE V
Sbjct: 33 EDQRRSILDQIMMPEARERLNNIAMVKKDKARALEDMLISAAKQGKLGGKVSQEQFVQMLEGV 95
BLAST of mRNA_E-fasciculatus_F_contig15078.3600.1 vs. uniprot
Match: L8GJP2_ACACA (Double-stranded DNA-binding domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GJP2_ACACA) HSP 1 Score: 73.9 bits (180), Expect = 2.590e-15 Identity = 37/62 (59.68%), Postives = 51/62 (82.26%), Query Frame = 1
Query: 31 ERRKQILDQIMTVEARLRLSNIAMVKPDKARRVEEMLIHAATSGKLGGKVTEDQFIQMLEQV 216
ERR+QIL QI+T EAR R++ I++VKP+KAR+VE+M+I AA SG+LGGKV E I +L+Q+
Sbjct: 42 ERRRQILAQILTAEARERMARISLVKPEKARQVEDMIIGAAQSGQLGGKVNEANLISLLDQI 103
BLAST of mRNA_E-fasciculatus_F_contig15078.3600.1 vs. uniprot
Match: F4PGL7_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PGL7_CAVFA) HSP 1 Score: 72.0 bits (175), Expect = 1.070e-14 Identity = 37/68 (54.41%), Postives = 56/68 (82.35%), Query Frame = 1
Query: 13 QEQQEQERRKQILDQIMTVEARLRLSNIAMVKPDKARRVEEMLIHAATSGKLGGKVTEDQFIQMLEQV 216
Q+++++ERR+ I+ QI+T +AR RLS IAMVKPDKAR++E+ML++AA +G+L KV E + I +LEQ+
Sbjct: 23 QKREQEERRQHIILQILTHDARERLSRIAMVKPDKARQIEDMLVNAAQTGRLSEKVDEQKLISLLEQI 90
BLAST of mRNA_E-fasciculatus_F_contig15078.3600.1 vs. uniprot
Match: W7U6K2_9STRA (Programmed cell death protein 5 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6K2_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 4.130e-14 Identity = 37/63 (58.73%), Postives = 53/63 (84.13%), Query Frame = 1
Query: 28 QERRKQILDQIMTVEARLRLSNIAMVKPDKARRVEEMLIHAATSGKLGGKVTEDQFIQMLEQV 216
+ERR+ +LDQI++ EA+ RL+ IA+V+ +K R V++MLI AATSG+L GKV+E+Q I+MLEQV
Sbjct: 44 EERRQFMLDQILSPEAKERLARIAIVRKEKVRGVQDMLIQAATSGRLRGKVSEEQLIEMLEQV 106
BLAST of mRNA_E-fasciculatus_F_contig15078.3600.1 vs. uniprot
Match: A0A6U1MCS4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MCS4_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 4.850e-14 Identity = 35/63 (55.56%), Postives = 50/63 (79.37%), Query Frame = 1
Query: 28 QERRKQILDQIMTVEARLRLSNIAMVKPDKARRVEEMLIHAATSGKLGGKVTEDQFIQMLEQV 216
+E+RK ++D I++ EA+ RL NIA VKP+KAR VE++L+ AAT+G+L GKVTE Q + MLE +
Sbjct: 36 EEQRKVMIDHILSQEAKQRLGNIAAVKPEKARGVEDLLLKAATNGQLQGKVTESQLVSMLESI 98
BLAST of mRNA_E-fasciculatus_F_contig15078.3600.1 vs. uniprot
Match: A0A8J8NIJ5_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NIJ5_HALGN) HSP 1 Score: 69.7 bits (169), Expect = 5.650e-14 Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 1
Query: 31 ERRKQILDQIMTVEARLRLSNIAMVKPDKARRVEEMLIHAATSGKLGGKVTEDQFIQMLEQV 216
E+RK IL QI+T EA+ RLSNIA+VKP+KA ++E +LI A GK+ GKVTE Q I +LEQV
Sbjct: 3 EQRKAILGQILTNEAKERLSNIAVVKPEKAEKLEMLLIQNAQRGKIQGKVTEGQMIDLLEQV 64
BLAST of mRNA_E-fasciculatus_F_contig15078.3600.1 vs. uniprot
Match: A0A835PYF1_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835PYF1_VANPL) HSP 1 Score: 70.1 bits (170), Expect = 9.480e-14 Identity = 34/63 (53.97%), Postives = 52/63 (82.54%), Query Frame = 1
Query: 28 QERRKQILDQIMTVEARLRLSNIAMVKPDKARRVEEMLIHAATSGKLGGKVTEDQFIQMLEQV 216
+ERR+ +L QI++ EAR RL+ IA+VKPDKAR VE++++ AA +G++G KV+ED+ I +LEQ+
Sbjct: 43 EERRQLMLSQILSAEARERLARIALVKPDKARGVEDVILRAAQAGQIGEKVSEDRLISLLEQI 105
BLAST of mRNA_E-fasciculatus_F_contig15078.3600.1 vs. uniprot
Match: A0A1D1V6A2_RAMVA (Uncharacterized protein n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1V6A2_RAMVA) HSP 1 Score: 69.7 bits (169), Expect = 1.770e-13 Identity = 36/73 (49.32%), Postives = 53/73 (72.60%), Query Frame = 1
Query: 1 HTPP-QEQQEQERRKQILDQIMTVEARLRLSNIAMVKPDKARRVEEMLIHAATSGKLGGKVTEDQFIQMLEQV 216
H P Q++Q+ E R IL Q++ AR RL+ IA+ KP+KAR VE +++ AT G+LGGK++E+QF+Q+L QV
Sbjct: 40 HNPEEQKRQQDEMRHSILSQVLDQSARARLNTIALAKPEKARMVENLIVQMATRGQLGGKLSEEQFVQILSQV 112
BLAST of mRNA_E-fasciculatus_F_contig15078.3600.1 vs. uniprot
Match: A0A194S7K2_RHOGW (Uncharacterized protein n=1 Tax=Rhodotorula graminis (strain WP1) TaxID=578459 RepID=A0A194S7K2_RHOGW) HSP 1 Score: 69.3 bits (168), Expect = 2.680e-13 Identity = 35/64 (54.69%), Postives = 50/64 (78.12%), Query Frame = 1
Query: 25 EQERRKQILDQIMTVEARLRLSNIAMVKPDKARRVEEMLIHAATSGKLGGKVTEDQFIQMLEQV 216
E ERR+ + QI++ EAR RLS IA+VKPD+AR +E++L+ A SG+L G+V+EDQ I +L+QV
Sbjct: 48 EDERRRAAMSQILSSEARERLSRIALVKPDRARAIEQLLMRMAQSGQLRGRVSEDQLIDVLDQV 111 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15078.3600.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15078.3600.1 >prot_E-fasciculatus_F_contig15078.3600.1 ID=prot_E-fasciculatus_F_contig15078.3600.1|Name=mRNA_E-fasciculatus_F_contig15078.3600.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=72bp HTPPQEQQEQERRKQILDQIMTVEARLRLSNIAMVKPDKARRVEEMLIHAback to top mRNA from alignment at E-fasciculatus_F_contig15078:288..1070- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15078.3600.1 ID=mRNA_E-fasciculatus_F_contig15078.3600.1|Name=mRNA_E-fasciculatus_F_contig15078.3600.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=783bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15078:288..1070- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15078:288..1070- >mRNA_E-fasciculatus_F_contig15078.3600.1 ID=mRNA_E-fasciculatus_F_contig15078.3600.1|Name=mRNA_E-fasciculatus_F_contig15078.3600.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=432bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15078:288..1070- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |