prot_E-fasciculatus_F_contig15058.3584.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15058.3584.1
Unique Nameprot_E-fasciculatus_F_contig15058.3584.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length371
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15058.3584.1 vs. uniprot
Match: A0A6H5KQZ1_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ1_9PHAE)

HSP 1 Score: 485 bits (1249), Expect = 5.080e-153
Identity = 294/361 (81.44%), Postives = 298/361 (82.55%), Query Frame = 0 
Query:    1 PLAARSLSQASIIDPLLGMLAGGTNKDAHASALAMELLVVLASHPPFSGRLRAAGTIPAVAACLEDRPARGAAA-EPGARASLMQLALIVLTGFLRVDGDQPAAAA-GQVDEAAAEIAATRAHVRVVALLSAPDPKLRFTAAELALQLSRRCRPGPAPDLNRNGGGGDGIAKDMIEAGGLRALWRACSDPSPMARPVALEALATMLGTAAAMSRSSASSEAVLALVSEGAVGGLVRQHVDPALSVLGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXTSALLALHFLAANPDPAVHGLFVAAAGVDEQQGGATRG---GSTWSMILSCVEAGAEGRGGPAFLEAALLAAGSVCGAPPLPVLG 356
            P +A     ASIIDPLLGMLAGGT+KDAHASALAMELLVVLASHPPFSGRLRAAGTIPAVAACLED PARGAAA EP  RASLMQLALIVLTGFLR DGDQPAAAA  +VDE AAEIAATRAHVRVVALLSAPDPKLRFT AELALQLSRRCRPGPAP+ NR GGGG  IAKDMIEAGGL ALWRACSDPSPMARPVALEALA MLGTAAAMSRS ASSEAVLALVSEGAV GLVRQHVDPALSVLG                        XXX  TSALLALHFLAANPDPAVHGLFV AAGVDEQ           STWS ILS VEAGAEGRGGPAFLEAALLAAGSVCGAPPLPVLG
Sbjct:  318 PRSAIEAVDASIIDPLLGMLAGGTSKDAHASALAMELLVVLASHPPFSGRLRAAGTIPAVAACLEDHPARGAAAAEPVTRASLMQLALIVLTGFLRGDGDQPAAAAEAKVDEIAAEIAATRAHVRVVALLSAPDPKLRFTTAELALQLSRRCRPGPAPNSNRGGGGG--IAKDMIEAGGLGALWRACSDPSPMARPVALEALAAMLGTAAAMSRSRASSEAVLALVSEGAVEGLVRQHVDPALSVLGR-RGRGVAGGGSATIPGDAAAAATXXXVATSALLALHFLAANPDPAVHGLFVVAAGVDEQXXXXXXXXXXSSTWSTILSSVEAGAEGRGGPAFLEAALLAAGSVCGAPPLPVLG 675
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BLAST of mRNA_E-fasciculatus_F_contig15058.3584.1 vs. uniprot
Match: D7FT64_ECTSI (E3 ubiquitin-protein ligase Nedd-4, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT64_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 1.010e-112
Identity = 218/250 (87.20%), Postives = 220/250 (88.00%), Query Frame = 0 
Query:    1 PLAARSLSQASIIDPLLGMLAGGTNKDAHASALAMELLVVLASHPPFSGRLRAAGTIPAVAACLEDRPARGAAA---EPGARASLMQLALIVLTGFLRVDGDQPAAAA--GQVDEAAAEIAATRAHVRVVALLSAPDPKLRFTAAELALQLSRRCRPGPAPDLNRNGGGGDGIAKDMIEAGGLRALWRACSDPSPMARPVALEALATMLGTAAAMSRSSASSEAVLALVSEGAVGGLVRQHVDPALSVLG 245
            P +A     ASIIDPLLGMLAGGTNKDAHASALAMELLVVLASHPPFSGRLRAAGTIPAVAACLED PARGAAA   EP ARASLMQLALIVLTGFLR DGDQPAA A  G+VDE AAEIAATRAHVRVVALLSAPDPKLRFTAAELALQLSRRCRPGPA           GIAKDMIEAGGL ALW ACSDPSPMARPVALEALA MLGTAAAMSRSSASSEAVLALVSEGAVGGLVRQHVDPALSVLG
Sbjct:  484 PRSAIETVDASIIDPLLGMLAGGTNKDAHASALAMELLVVLASHPPFSGRLRAAGTIPAVAACLEDHPARGAAAAAAEPVARASLMQLALIVLTGFLRGDGDQPAAVAATGEVDEVAAEIAATRAHVRVVALLSAPDPKLRFTAAELALQLSRRCRPGPAXXXXXXXXX-XGIAKDMIEAGGLGALWSACSDPSPMARPVALEALAAMLGTAAAMSRSSASSEAVLALVSEGAVGGLVRQHVDPALSVLG 732
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15058.3584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQZ1_9PHAE5.080e-15381.44FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FT64_ECTSI1.010e-11287.20E3 ubiquitin-protein ligase Nedd-4, putative n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 370..371
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..304
e-value: 2.2E-11
score: 45.1
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 9..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15058contigE-fasciculatus_F_contig15058:1870..2982 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15058.3584.1mRNA_E-fasciculatus_F_contig15058.3584.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15058 1868..2982 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15058.3584.1 ID=prot_E-fasciculatus_F_contig15058.3584.1|Name=mRNA_E-fasciculatus_F_contig15058.3584.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=371bp
PLAARSLSQASIIDPLLGMLAGGTNKDAHASALAMELLVVLASHPPFSGR
LRAAGTIPAVAACLEDRPARGAAAEPGARASLMQLALIVLTGFLRVDGDQ
PAAAAGQVDEAAAEIAATRAHVRVVALLSAPDPKLRFTAAELALQLSRRC
RPGPAPDLNRNGGGGDGIAKDMIEAGGLRALWRACSDPSPMARPVALEAL
ATMLGTAAAMSRSSASSEAVLALVSEGAVGGLVRQHVDPALSVLGGGGRG
RGVAGGGGSATAPGEAAAAAAAAATSALLALHFLAANPDPAVHGLFVAAA
GVDEQQGGATRGGSTWSMILSCVEAGAEGRGGPAFLEAALLAAGSVCGAP
PLPVLGGGGGAAAAVVPMGLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR011989ARM-like