prot_E-fasciculatus_F_contig1505.3580.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1505.3580.1
Unique Nameprot_E-fasciculatus_F_contig1505.3580.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length185
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1505.3580.1 vs. uniprot
Match: D7G2Z6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2Z6_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 4.410e-88
Identity = 144/173 (83.24%), Postives = 149/173 (86.13%), Query Frame = 0 
Query:   13 MVVMLVPLGDAFAFGSSAGWHTHAVARQSTRSTRSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGATSNAKWLQVLDNTSELEPGSVKVVSGKYKGEDRVFTLAAYGGTYYAVSEACGRCKFPMINGKVKLLTGGGKAEDVKPGVEQDPEAEIAIACPLCGAMFNLRTGD 185
            MVV+LVPL DAFA GSSAGWHTHAVAR +TRSTRS     XXXXXXXXXX                SGATSNAKWLQVLD+TSELEPGSVKVVSGKYKGEDRVFTLAAYGGTYYAVSEACGRCKFP+INGKVKLLTGGGKAEDVKPGVEQDPEAEIAIACPLCGAMFNLRTG+
Sbjct:    1 MVVVLVPLVDAFALGSSAGWHTHAVARPATRSTRSLTTMMXXXXXXXXXXYAEAKNKKSSGSKQQPSGATSNAKWLQVLDSTSELEPGSVKVVSGKYKGEDRVFTLAAYGGTYYAVSEACGRCKFPLINGKVKLLTGGGKAEDVKPGVEQDPEAEIAIACPLCGAMFNLRTGE 173
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BLAST of mRNA_E-fasciculatus_F_contig1505.3580.1 vs. uniprot
Match: W7TAQ7_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TAQ7_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.030e-6
Identity = 39/98 (39.80%), Postives = 50/98 (51.02%), Query Frame = 0 
Query:   89 QVLDNTSELEP--GSVKVVSGKYKGEDRVFTLAAYGGTYYAVSEACGRCKFPMINGKVKLLTGGGKAEDVKPGVEQDPEAEIAIACPLCGAMFNLRTG 184
            +VLD  SEL    GS K V G  K +  +  +    G   A+   CGRCKFP++ GKV        +ED  P VE D +  I I CPLC   F+L +G
Sbjct:  106 KVLDVGSELADAEGSQKAV-GPLKDDKFLLLIRRKEGRVSAIDANCGRCKFPLLKGKV--------SED--PSVEDDEDKGI-ITCPLCAVRFSLASG 191
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BLAST of mRNA_E-fasciculatus_F_contig1505.3580.1 vs. uniprot
Match: A0A7S2USE0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USE0_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 5.910e-5
Identity = 33/112 (29.46%), Postives = 50/112 (44.64%), Query Frame = 0 
Query:   78 ASGATSN--AKWLQVLDNTSELEP--GSVKVVS-GKYKGEDRVFTLAAYGGTYYAVSEACGRCKFPMINGKVKLLTGGGKAEDVKPGVEQDPEAEIAIACPLCGAMFNLRTG 184
            A G  SN    W+QV ++  +++   G+ K V      G+     +  + G   +    CGRC+FP+INGK+                  D + E  I CPLCG  F+L +G
Sbjct:   82 AEGEGSNYMGTWIQVFESDEDMDSKEGATKAVEITDPLGKPAPVLMIRHEGKISSTEIGCGRCQFPLINGKI-----------------MDQDGEPHIECPLCGCGFSLSSG 176
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1505.3580.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G2Z6_ECTSI4.410e-8883.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TAQ7_9STRA2.030e-639.80Uncharacterized protein n=2 Tax=Nannochloropsis ga... [more]
A0A7S2USE0_9STRA5.910e-529.46Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 83..185
e-value: 3.6E-7
score: 31.7
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 93..184
NoneNo IPR availablePANTHERPTHR21496:SF22coord: 66..184
NoneNo IPR availablePANTHERPTHR21496FERREDOXIN-RELATEDcoord: 66..184
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..185
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.877
NoneNo IPR availableTMHMMTMhelixcoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1505contigE-fasciculatus_F_contig1505:13210..17493 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1505.3580.1mRNA_E-fasciculatus_F_contig1505.3580.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1505 13210..17493 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1505.3580.1 ID=prot_E-fasciculatus_F_contig1505.3580.1|Name=mRNA_E-fasciculatus_F_contig1505.3580.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=185bp
MSTTTRIVALLSMVVMLVPLGDAFAFGSSAGWHTHAVARQSTRSTRSTTT
MMMAKKNRRERRYADAKKKKASSSTQQASGATSNAKWLQVLDNTSELEPG
SVKVVSGKYKGEDRVFTLAAYGGTYYAVSEACGRCKFPMINGKVKLLTGG
GKAEDVKPGVEQDPEAEIAIACPLCGAMFNLRTGD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036922Rieske_2Fe-2S_sf