prot_E-fasciculatus_F_contig15041.3576.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15041.3576.1
Unique Nameprot_E-fasciculatus_F_contig15041.3576.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length120
Homology
BLAST of mRNA_E-fasciculatus_F_contig15041.3576.1 vs. uniprot
Match: D7FUM9_ECTSI (Ribosomal protein S23, component of cytosolic 80S ribosome and 40S small subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUM9_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 3.880e-76
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0
Query:    1 QDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 119
            +DYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS
Sbjct:   88 KDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 206          
BLAST of mRNA_E-fasciculatus_F_contig15041.3576.1 vs. uniprot
Match: A0A835Z8V8_9STRA (Putative ribosomal protein S23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8V8_9STRA)

HSP 1 Score: 224 bits (570), Expect = 1.640e-73
Identity = 111/119 (93.28%), Postives = 118/119 (99.16%), Query Frame = 0
Query:    1 QDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 119
            +DYNK+HSVTAMKANPLGG+SMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKK+AAFVPRDGCLN+TDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGV++LALYK KKEKPRS
Sbjct:   27 KDYNKAHSVTAMKANPLGGASMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNYTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSILALYKGKKEKPRS 145          
BLAST of mRNA_E-fasciculatus_F_contig15041.3576.1 vs. uniprot
Match: A0A4W5LQ08_9TELE (40S ribosomal protein S23 n=31 Tax=Eukaryota TaxID=2759 RepID=A0A4W5LQ08_9TELE)

HSP 1 Score: 222 bits (566), Expect = 1.430e-72
Identity = 110/119 (92.44%), Postives = 116/119 (97.48%), Query Frame = 0
Query:    1 QDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 119
            + YNKSHS+TAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKC RVQLIKNGKK+AAFVPRDGCLN+ DENDEVLI+GFGRRGHAVGDIPGVRFKVVKVAGV+LLALYKDKKEKPRS
Sbjct:   50 KSYNKSHSITAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPRDGCLNYVDENDEVLIAGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKDKKEKPRS 168          
BLAST of mRNA_E-fasciculatus_F_contig15041.3576.1 vs. uniprot
Match: M4BPE8_HYAAE (Uncharacterized protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=M4BPE8_HYAAE)

HSP 1 Score: 216 bits (549), Expect = 2.610e-70
Identity = 109/119 (91.60%), Postives = 114/119 (95.80%), Query Frame = 0
Query:    1 QDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 119
            + YNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRK  RVQLIKN KK+AAFVPRDGCLNF DENDEVLISGFGRRGHAVGDIPGVRFKVVKV+GV+LLALYK+KKEKPRS
Sbjct:   27 KSYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKSCRVQLIKNSKKIAAFVPRDGCLNFVDENDEVLISGFGRRGHAVGDIPGVRFKVVKVSGVSLLALYKEKKEKPRS 145          
BLAST of mRNA_E-fasciculatus_F_contig15041.3576.1 vs. uniprot
Match: A0A7R9WFA5_9STRA (Hypothetical protein n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A7R9WFA5_9STRA)

HSP 1 Score: 214 bits (545), Expect = 9.930e-70
Identity = 106/119 (89.08%), Postives = 114/119 (95.80%), Query Frame = 0
Query:    1 QDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 119
            Q Y K+HS+TAMKANP+GGS+MAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKK+AAFVPRDGCLN+ DENDEVLISGFGR GHAVGDIPGVRFKV KVAGV+LLALYK+KKEKPRS
Sbjct:   25 QKYCKAHSITAMKANPMGGSTMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNYVDENDEVLISGFGRSGHAVGDIPGVRFKVAKVAGVSLLALYKEKKEKPRS 143          
BLAST of mRNA_E-fasciculatus_F_contig15041.3576.1 vs. uniprot
Match: B8C1Z7_THAPS (RS23, ribosomal protein 23 40S small ribosomal subunit n=15 Tax=Bacillariophyta TaxID=2836 RepID=B8C1Z7_THAPS)

HSP 1 Score: 212 bits (540), Expect = 5.740e-69
Identity = 104/117 (88.89%), Postives = 113/117 (96.58%), Query Frame = 0
Query:    3 YNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 119
            Y K+HSVTAMKANP+GGS+MAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKK+AAFVPRDGCLN+ DENDEVL++GFGR GHAVGDIPGVRFK VKVAGV+LLALYK+KKEKPRS
Sbjct:   27 YTKAHSVTAMKANPMGGSTMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNYVDENDEVLVAGFGRSGHAVGDIPGVRFKCVKVAGVSLLALYKEKKEKPRS 143          
BLAST of mRNA_E-fasciculatus_F_contig15041.3576.1 vs. uniprot
Match: W7TKK2_9STRA (40s ribosomal protein s23 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKK2_9STRA)

HSP 1 Score: 211 bits (538), Expect = 1.240e-68
Identity = 104/117 (88.89%), Postives = 113/117 (96.58%), Query Frame = 0
Query:    3 YNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 119
            +NK+HSVT MKANPLGG++MAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKK+AAFVPRDGCLNF DENDEVLI+GFGR GHAVGDIPGVRFKV+KV+GV LLAL+KDKKEKPRS
Sbjct:   29 WNKAHSVTHMKANPLGGAAMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFVDENDEVLIAGFGRSGHAVGDIPGVRFKVIKVSGVGLLALFKDKKEKPRS 145          
BLAST of mRNA_E-fasciculatus_F_contig15041.3576.1 vs. uniprot
Match: A0A6U0RBQ4_9STRA (Hypothetical protein n=2 Tax=Mediophyceae TaxID=589449 RepID=A0A6U0RBQ4_9STRA)

HSP 1 Score: 210 bits (534), Expect = 4.720e-68
Identity = 103/117 (88.03%), Postives = 114/117 (97.44%), Query Frame = 0
Query:    3 YNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 119
            Y K +S+TAM+ANP+GGS+MAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKK+AAFVPRDGCLN+ DENDEVLI+GFGR+GHAVGDIPGVRFKVVKVAGV+LLALYK+KKEKPRS
Sbjct:   27 YCKKNSITAMRANPMGGSTMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNYVDENDEVLIAGFGRKGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 143          
BLAST of mRNA_E-fasciculatus_F_contig15041.3576.1 vs. uniprot
Match: A0A5A8EIQ0_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EIQ0_CAFRO)

HSP 1 Score: 209 bits (533), Expect = 7.150e-68
Identity = 104/117 (88.89%), Postives = 111/117 (94.87%), Query Frame = 0
Query:    3 YNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 119
            YNKSHS+TAMKANP GG+SMAKGIVLEK+G+EAKQPNSAIRKC RVQLIKNGKK+AAFVPRDG LNF DENDEVLISGFGR GHAVGDIPGVRFKVVKVAGV+LLAL+K KKEKPRS
Sbjct:   29 YNKSHSITAMKANPFGGASMAKGIVLEKMGVEAKQPNSAIRKCARVQLIKNGKKIAAFVPRDGSLNFVDENDEVLISGFGRAGHAVGDIPGVRFKVVKVAGVSLLALFKGKKEKPRS 145          
BLAST of mRNA_E-fasciculatus_F_contig15041.3576.1 vs. uniprot
Match: A0A8E8PJI4_9STRA (40S ribosomal protein S23 n=2 Tax=Placidida sp. TaxID=2810146 RepID=A0A8E8PJI4_9STRA)

HSP 1 Score: 209 bits (532), Expect = 1.020e-67
Identity = 104/117 (88.89%), Postives = 110/117 (94.02%), Query Frame = 0
Query:    3 YNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 119
            YNKSHSV AMKANPLGGSSMAKGIV+EKIGIEAKQPNSAIRKCVRVQLIKN KK+ AFVP DGCLNF DENDEVL+SGFGR GHAVGDIPGVRFKVVKVAGV+LLAL+K KKEKPR+
Sbjct:   29 YNKSHSVAAMKANPLGGSSMAKGIVVEKIGIEAKQPNSAIRKCVRVQLIKNSKKITAFVPNDGCLNFVDENDEVLVSGFGRSGHAVGDIPGVRFKVVKVAGVSLLALFKGKKEKPRA 145          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15041.3576.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUM9_ECTSI3.880e-7699.16Ribosomal protein S23, component of cytosolic 80S ... [more]
A0A835Z8V8_9STRA1.640e-7393.28Putative ribosomal protein S23 n=1 Tax=Tribonema m... [more]
A0A4W5LQ08_9TELE1.430e-7292.4440S ribosomal protein S23 n=31 Tax=Eukaryota TaxID... [more]
M4BPE8_HYAAE2.610e-7091.60Uncharacterized protein n=2 Tax=Peronosporaceae Ta... [more]
A0A7R9WFA5_9STRA9.930e-7089.08Hypothetical protein n=4 Tax=Bacillariophyta TaxID... [more]
B8C1Z7_THAPS5.740e-6988.89RS23, ribosomal protein 23 40S small ribosomal sub... [more]
W7TKK2_9STRA1.240e-6888.8940s ribosomal protein s23 n=2 Tax=Monodopsidaceae ... [more]
A0A6U0RBQ4_9STRA4.720e-6888.03Hypothetical protein n=2 Tax=Mediophyceae TaxID=58... [more]
A0A5A8EIQ0_CAFRO7.150e-6888.89Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A8E8PJI4_9STRA1.020e-6788.8940S ribosomal protein S23 n=2 Tax=Placidida sp. Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005680Ribosomal protein S23, eukaryotic/archaealTIGRFAMTIGR00982TIGR00982coord: 8..118
e-value: 2.5E-48
score: 161.3
NoneNo IPR availableGENE3D2.40.50.140coord: 1..119
e-value: 4.1E-63
score: 212.1
NoneNo IPR availablePANTHERPTHR11652:SF1440S RIBOSOMAL PROTEIN S23coord: 2..119
IPR006032Ribosomal protein S12/S23PIRSFPIRSF002133RPS12p_RPS12a_RPS23e_RPS12ocoord: 1..119
e-value: 1.2E-30
score: 103.5
IPR006032Ribosomal protein S12/S23PFAMPF00164Ribosom_S12_S23coord: 6..118
e-value: 1.7E-49
score: 166.2
IPR006032Ribosomal protein S12/S23PANTHERPTHR1165230S RIBOSOMAL PROTEIN S12 FAMILY MEMBERcoord: 2..119
IPR006032Ribosomal protein S12/S23PROSITEPS00055RIBOSOMAL_S12coord: 36..43
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 2..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15041contigE-fasciculatus_F_contig15041:61..1182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15041.3576.1mRNA_E-fasciculatus_F_contig15041.3576.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15041 61..1182 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15041.3576.1 ID=prot_E-fasciculatus_F_contig15041.3576.1|Name=mRNA_E-fasciculatus_F_contig15041.3576.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=120bp
QDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQL
IKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVK
VAGVALLALYKDKKEKPRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR006032Ribosomal_S12/S23
IPR005680Ribosomal_S23_euk/arc