prot_E-fasciculatus_F_contig15037.3571.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15037.3571.1
Unique Nameprot_E-fasciculatus_F_contig15037.3571.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length290
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15037.3571.1 vs. uniprot
Match: A0A6H5JKF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF0_9PHAE)

HSP 1 Score: 369 bits (947), Expect = 6.790e-122
Identity = 223/290 (76.90%), Postives = 233/290 (80.34%), Query Frame = 0 
Query:    1 AIQGRLLRPDLEISVISRDCEFFLDFSRGVLEARSLFEVSTVGGGGPGEPETLEMAQIKGTACVDTRTQTCTQRLLSPQLRMVFDDAMRASARVLALHSFMDRGAGMGEFETGVXXXXXXXXXXNSLRRMESLRDSLARASTDGMGRAAAAGTGLLANVVAGVGSAIGASRTGTLAGDPLYVGGDGGGSNSEGPKSTITDEAALVQLYRRADPAEEAGRAAP--GXXXXXXXXXXXXXXXXXXXPDEGTPAINSFFHHGGAYSEADSSGVGAGSSSSSPLAGPHGGNGQH 288
            AIQGRLLRPDLEISVISRDCEFFLDFS GVLEA SLFEVSTVGGGGPG PETLE+A IKGTA VD+R+QTCTQRLLSPQLRMVFDDAMR SARVLALHSFMDRGAGM EF  GV          +SLRR+ SLRDSLARASTDGMGRAAAAGTGLLANVVAGVGSAIGASR GT AGD  +V   GGG NSEGPKSTITDEA L+QLYRR D AEE GRAAP            XXXXXXXX  PDEGTP INSF+ HGG  + AD SGVGAGSS S PLAG   GNG+H
Sbjct:  199 AIQGRLLRPDLEISVISRDCEFFLDFSSGVLEAHSLFEVSTVGGGGPGAPETLEIAHIKGTASVDSRSQTCTQRLLSPQLRMVFDDAMRTSARVLALHSFMDRGAGMDEFGAGVGVGGLSSSS-SSLRRIGSLRDSLARASTDGMGRAAAAGTGLLANVVAGVGSAIGASRNGTPAGDFFHV---GGGGNSEGPKSTITDEAPLLQLYRRTDLAEEEGRAAPVAAATAGATGDAXXXXXXXXVAPDEGTPVINSFYPHGGECTGADGSGVGAGSSRSPPLAGRRVGNGRH 484
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15037.3571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JKF0_9PHAE6.790e-12276.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15037contigE-fasciculatus_F_contig15037:889..3134 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15037.3571.1mRNA_E-fasciculatus_F_contig15037.3571.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15037 889..3134 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15037.3571.1 ID=prot_E-fasciculatus_F_contig15037.3571.1|Name=mRNA_E-fasciculatus_F_contig15037.3571.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=290bp
AIQGRLLRPDLEISVISRDCEFFLDFSRGVLEARSLFEVSTVGGGGPGEP
ETLEMAQIKGTACVDTRTQTCTQRLLSPQLRMVFDDAMRASARVLALHSF
MDRGAGMGEFETGVGVGGLSNSNSNSLRRMESLRDSLARASTDGMGRAAA
AGTGLLANVVAGVGSAIGASRTGTLAGDPLYVGGDGGGSNSEGPKSTITD
EAALVQLYRRADPAEEAGRAAPGAAATAAGSACTTTTTTTVAPDEGTPAI
NSFFHHGGAYSEADSSGVGAGSSSSSPLAGPHGGNGQHGA
back to top