prot_E-fasciculatus_F_contig15032.3568.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15032.3568.1
Unique Nameprot_E-fasciculatus_F_contig15032.3568.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length104
Homology
BLAST of mRNA_E-fasciculatus_F_contig15032.3568.1 vs. uniprot
Match: A0A6H5JHB7_9PHAE (C2H2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHB7_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 3.330e-50
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0
Query:    1 SQVRLTNVAVVRLNKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLMKAFGTDNQLEACRIILDKGEMQV 88
            +QVRLTNVAVVRLNKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLMKAFGTDNQLEACRIILDKGEMQV
Sbjct:   10 NQVRLTNVAVVRLNKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLMKAFGTDNQLEACRIILDKGEMQV 97          
BLAST of mRNA_E-fasciculatus_F_contig15032.3568.1 vs. uniprot
Match: A0A6V1NX56_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NX56_HETAK)

HSP 1 Score: 142 bits (357), Expect = 1.510e-40
Identity = 70/98 (71.43%), Postives = 81/98 (82.65%), Query Frame = 0
Query:    1 SQVRLTNVAVVRLNKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLMKAFGTDNQLEACRIILDKGEMQVIPPPRAARQQ 98
            +QVRLTNVAVVRL + GKRFEIACY+NKVVNWRN+VETD+DEVLQI+SVF+NVSKGVLAK KDL KAFGT      CR+ILDKG++QV    R   Q+
Sbjct:   10 NQVRLTNVAVVRLQRAGKRFEIACYKNKVVNWRNKVETDIDEVLQIDSVFQNVSKGVLAKAKDLEKAFGTTETEACCRVILDKGQLQVSDREREVHQE 107          
BLAST of mRNA_E-fasciculatus_F_contig15032.3568.1 vs. uniprot
Match: A0A835Z759_9STRA (SBDS protein C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z759_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.060e-37
Identity = 71/99 (71.72%), Postives = 83/99 (83.84%), Query Frame = 0
Query:    2 QVRLTNVAVVRLNKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLMKAFGTDNQLEACRIILDKGEMQVIPPPRAARQQEA 100
            QVRLTNVAVVR+ +TGKRFEIACYRNKVVNWRNRVETDL+EVLQI +VF+NVSKGVLA  KD+ KAFGT+++ E  R ILDKGE+QV    R A+ + A
Sbjct:   11 QVRLTNVAVVRVTRTGKRFEIACYRNKVVNWRNRVETDLNEVLQITTVFQNVSKGVLANKKDMAKAFGTEDEDEIIRYILDKGEVQVSDKERRAQYESA 109          
BLAST of mRNA_E-fasciculatus_F_contig15032.3568.1 vs. uniprot
Match: V5H0P4_ANOGL (Ribosome maturation protein SBDS (Fragment) n=2 Tax=Anoplophora glabripennis TaxID=217634 RepID=V5H0P4_ANOGL)

HSP 1 Score: 135 bits (340), Expect = 1.730e-37
Identity = 63/88 (71.59%), Postives = 77/88 (87.50%), Query Frame = 0
Query:    1 SQVRLTNVAVVRLNKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLMKAFGTDNQLEACRIILDKGEMQV 88
            +Q+RLTNVA+VR+ KTGKRFEIACYRNKVV+WRN+VE D+DEVLQ  +VF NVSKG +AK +DL+KAFGTDNQ E C+ IL KGE+Q+
Sbjct:    7 NQIRLTNVAIVRIKKTGKRFEIACYRNKVVSWRNQVEKDIDEVLQTHTVFTNVSKGQVAKKEDLIKAFGTDNQTEICKQILAKGELQI 94          
BLAST of mRNA_E-fasciculatus_F_contig15032.3568.1 vs. uniprot
Match: A0A0T6BF36_9SCAR (SBDS domain-containing protein n=1 Tax=Oryctes borbonicus TaxID=1629725 RepID=A0A0T6BF36_9SCAR)

HSP 1 Score: 129 bits (325), Expect = 4.750e-37
Identity = 62/88 (70.45%), Postives = 74/88 (84.09%), Query Frame = 0
Query:    1 SQVRLTNVAVVRLNKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLMKAFGTDNQLEACRIILDKGEMQV 88
            +Q+RLTNVAVVR  K GKRFEIACYRNKVV+WRN VE D+DEVLQ  +VF NVSKG +AK +DL+KAFGT++Q E C+ IL KGE+QV
Sbjct:    9 NQIRLTNVAVVRTKKAGKRFEIACYRNKVVSWRNEVEKDIDEVLQTHTVFTNVSKGQVAKKEDLIKAFGTEDQTEICKEILKKGELQV 96          
BLAST of mRNA_E-fasciculatus_F_contig15032.3568.1 vs. uniprot
Match: UPI000180C90C (ribosome maturation protein SBDS-like n=1 Tax=Ciona intestinalis TaxID=7719 RepID=UPI000180C90C)

HSP 1 Score: 134 bits (336), Expect = 6.900e-37
Identity = 64/94 (68.09%), Postives = 77/94 (81.91%), Query Frame = 0
Query:    1 SQVRLTNVAVVRLNKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLMKAFGTDNQLEACRIILDKGEMQVIPPPRA 94
            +QVRLTNVA+VR+ KTGKRFEIACY+NKV++WRN  E D+DEVLQ  +VF NVSKG  AKN+DL+KAFGTDNQ E C+ IL KGE+QV    R+
Sbjct:    8 NQVRLTNVAIVRIKKTGKRFEIACYKNKVMSWRNNTEKDIDEVLQTHTVFVNVSKGQTAKNQDLIKAFGTDNQTEVCKQILAKGELQVSEKERS 101          
BLAST of mRNA_E-fasciculatus_F_contig15032.3568.1 vs. uniprot
Match: A0A5E4QIS8_9NEOP (Ribosome maturation protein SBDS n=3 Tax=Pieridae TaxID=7114 RepID=A0A5E4QIS8_9NEOP)

HSP 1 Score: 134 bits (336), Expect = 7.080e-37
Identity = 62/88 (70.45%), Postives = 76/88 (86.36%), Query Frame = 0
Query:    1 SQVRLTNVAVVRLNKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLMKAFGTDNQLEACRIILDKGEMQV 88
            +Q+RLTNVA+VRL K GKRFEIACYRNKV++WRN+VETD+DEVLQ  +VF NVSKG +AK +DL+K FG DNQ E C+ IL+KGE+QV
Sbjct:    9 NQIRLTNVAIVRLKKGGKRFEIACYRNKVISWRNKVETDIDEVLQTHTVFTNVSKGQVAKKEDLIKVFGRDNQTEICKEILEKGELQV 96          
BLAST of mRNA_E-fasciculatus_F_contig15032.3568.1 vs. uniprot
Match: J3JYJ0_DENPD (Ribosome maturation protein SBDS n=1 Tax=Dendroctonus ponderosae TaxID=77166 RepID=J3JYJ0_DENPD)

HSP 1 Score: 134 bits (336), Expect = 7.640e-37
Identity = 61/99 (61.62%), Postives = 81/99 (81.82%), Query Frame = 0
Query:    1 SQVRLTNVAVVRLNKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLMKAFGTDNQLEACRIILDKGEMQVIPPPRAARQQE 99
            +Q+RLTN+A+VR+ K GKRFEIACYRNKVV+WRN VE ++DEVLQ  SVF NVSKG +AK +DL+KAFG DNQ E C++IL+KGE+Q+    R ++ ++
Sbjct:    9 NQIRLTNIAIVRMKKAGKRFEIACYRNKVVSWRNNVEKNIDEVLQTHSVFTNVSKGQVAKKEDLLKAFGMDNQTEICKLILEKGELQISDKERQSQNEQ 107          
BLAST of mRNA_E-fasciculatus_F_contig15032.3568.1 vs. uniprot
Match: A0A0C9Q0K3_9HYME (Ribosome maturation protein SBDS n=2 Tax=Opiinae TaxID=68883 RepID=A0A0C9Q0K3_9HYME)

HSP 1 Score: 133 bits (335), Expect = 1.030e-36
Identity = 62/88 (70.45%), Postives = 76/88 (86.36%), Query Frame = 0
Query:    1 SQVRLTNVAVVRLNKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLMKAFGTDNQLEACRIILDKGEMQV 88
            +Q+RLTNVAVVR+ K GKRFEIACYRNKVV+WRN++E D+DEVLQ  +VF NVSKG ++K +DL+KAFGTDNQ E C+ IL KGE+QV
Sbjct:    9 NQIRLTNVAVVRMKKQGKRFEIACYRNKVVSWRNKLEKDIDEVLQTHTVFTNVSKGQMSKKEDLLKAFGTDNQTEICKEILSKGELQV 96          
BLAST of mRNA_E-fasciculatus_F_contig15032.3568.1 vs. uniprot
Match: A0A834J129_RHYFE (Ribosome maturation protein SBDS n=1 Tax=Rhynchophorus ferrugineus TaxID=354439 RepID=A0A834J129_RHYFE)

HSP 1 Score: 132 bits (333), Expect = 1.330e-36
Identity = 63/88 (71.59%), Postives = 75/88 (85.23%), Query Frame = 0
Query:    1 SQVRLTNVAVVRLNKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLMKAFGTDNQLEACRIILDKGEMQV 88
            +Q+RLTNVAVVR+ K GKRFEIACYRNKVV+WRN+VE D+DEVLQ  +VF NVSKG +AK +DL+KAF TDNQ E C+ IL KGE+QV
Sbjct:    9 NQIRLTNVAVVRIKKAGKRFEIACYRNKVVSWRNQVEKDIDEVLQTHTVFANVSKGQVAKKEDLIKAFNTDNQTEICKQILSKGELQV 96          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15032.3568.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHB7_9PHAE3.330e-5098.86C2H2-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6V1NX56_HETAK1.510e-4071.43Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835Z759_9STRA1.060e-3771.72SBDS protein C-terminal domain-containing protein ... [more]
V5H0P4_ANOGL1.730e-3771.59Ribosome maturation protein SBDS (Fragment) n=2 Ta... [more]
A0A0T6BF36_9SCAR4.750e-3770.45SBDS domain-containing protein n=1 Tax=Oryctes bor... [more]
UPI000180C90C6.900e-3768.09ribosome maturation protein SBDS-like n=1 Tax=Cion... [more]
A0A5E4QIS8_9NEOP7.080e-3770.45Ribosome maturation protein SBDS n=3 Tax=Pieridae ... [more]
J3JYJ0_DENPD7.640e-3761.62Ribosome maturation protein SBDS n=1 Tax=Dendrocto... [more]
A0A0C9Q0K3_9HYME1.030e-3670.45Ribosome maturation protein SBDS n=2 Tax=Opiinae T... [more]
A0A834J129_RHYFE1.330e-3671.59Ribosome maturation protein SBDS n=1 Tax=Rhynchoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019783Ribosome maturation protein SBDS, N-terminalPFAMPF01172SBDScoord: 7..88
e-value: 2.6E-30
score: 104.3
IPR036786Ribosome maturation protein SBDS, N-terminal domain superfamilyGENE3D3.30.1250.10coord: 1..87
e-value: 5.7E-38
score: 130.8
IPR036786Ribosome maturation protein SBDS, N-terminal domain superfamilySUPERFAMILY89895FYSH domaincoord: 3..87
NoneNo IPR availablePANTHERPTHR10927:SF1RIBOSOME MATURATION PROTEIN SBDScoord: 2..98
IPR039100Ribosome maturation protein Sdo1/SBDS-likePANTHERPTHR10927RIBOSOME MATURATION PROTEIN SBDScoord: 2..98
IPR018023Ribosome maturation protein SBDS, conserved sitePROSITEPS01267UPF0023coord: 37..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15032contigE-fasciculatus_F_contig15032:2296..2834 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15032.3568.1mRNA_E-fasciculatus_F_contig15032.3568.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15032 2296..2834 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15032.3568.1 ID=prot_E-fasciculatus_F_contig15032.3568.1|Name=mRNA_E-fasciculatus_F_contig15032.3568.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=104bp
SQVRLTNVAVVRLNKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVF
ENVSKGVLAKNKDLMKAFGTDNQLEACRIILDKGEMQVIPPPRAARQQEA
EEFR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018023Ribosome_mat_SBDS_CS
IPR039100Sdo1/SBDS-like
IPR036786Ribosome_mat_SBDS_N_sf
IPR019783Ribosome_mat_SBDS_N