prot_E-fasciculatus_F_contig1503.3566.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1503.3566.1
Unique Nameprot_E-fasciculatus_F_contig1503.3566.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length341
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1503.3566.1 vs. uniprot
Match: A0A6H5JXD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXD5_9PHAE)

HSP 1 Score: 605 bits (1561), Expect = 1.890e-217
Identity = 309/352 (87.78%), Postives = 323/352 (91.76%), Query Frame = 0 
Query:    1 MMRPPLARRAAAGYVLSCGRRRRAPPS-PSSFTGQTP-----------TRGWSSSGFAAPGGDAGAAEMPGLPSAFPWREAPDNRGVRGLAERAMHSVMQHQHRRFLRAATKLDDADDDAFLRAAEMAFVQVAAGVFQMPAHQVIAPLANGGGGEGKASSESGDRGKRRDGLPVWDIPEGALVDPRDVMHKDLAEFYLQAAVAAKVSRSTPFYRLHGFSSCEVSNVNVLWGAQRGDLPEEGETIEIWGSKYALKSLLQDIKAISSYRLSKDRAVLDKPLSSIRKTTVQVDVDIGCTETFFVSDDRTEEVVQGSKAVAVRKHRLRLESSPFLKRDFQWSVVDLDNWMKGNTFW 340
            MMRPPLAR A AGY+LSC RR R PPS PSSFTG TP           TRGWSSSGFA PGGDA AAE+PGLPSAFPWREAPDNRGVRGL ERAM+SVMQHQHRRFLRAATKLDDADDDAFLRAAEMAFVQVAAGVFQMPAHQVIAPLA+G G EGK+SSESGDRG+RRDGLPVWDIPEGALVDPRDVMHKDLA+FY+QAAVAAKVSRSTPFYRLHG  SCE+SNVNVLWGAQRGDLPEEGETIEIWGSKY LKS+L+DIKAIS YR+SKDR VLDKPLSSIRKTTVQVDVDIGCTETFFVSDDRTEE+VQGSKA AVRKHRLRLESSPFLKRDFQWSVVDLD+WMKGNTFW
Sbjct:    1 MMRPPLARSAGAGYLLSCRRRCRPPPSFPSSFTGGTPPEAAAKSNGVATRGWSSSGFATPGGDASAAEVPGLPSAFPWREAPDNRGVRGLVERAMYSVMQHQHRRFLRAATKLDDADDDAFLRAAEMAFVQVAAGVFQMPAHQVIAPLADGEGDEGKSSSESGDRGRRRDGLPVWDIPEGALVDPRDVMHKDLADFYVQAAVAAKVSRSTPFYRLHGLRSCEISNVNVLWGAQRGDLPEEGETIEIWGSKYVLKSVLEDIKAISRYRVSKDRDVLDKPLSSIRKTTVQVDVDIGCTETFFVSDDRTEEIVQGSKAFAVRKHRLRLESSPFLKRDFQWSVVDLDDWMKGNTFW 352
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BLAST of mRNA_E-fasciculatus_F_contig1503.3566.1 vs. uniprot
Match: D8LFT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT8_ECTSI)

HSP 1 Score: 406 bits (1043), Expect = 7.790e-139
Identity = 219/315 (69.52%), Postives = 233/315 (73.97%), Query Frame = 0 
Query:   37 TRGWSSSGFAAPGGDAGAAEMPGLPSAFPWREAPDNRGVRGLAERAMHSVMQHQHRRFLRAATKLDDADDDAFLRAAEMAFVQVAA--GVFQMPAHQVIAPLANGGGGEGKASSESGDRGKRR---------DGLPVWDIPEGALVDPRDVMHKDLAEFYLQAAVAAKVSRSTPFYRLHGFSSCEVSNVNVLWGAQRGDLPEEGETIEIWGSKYALKSLLQDIKAISSYRLSKDRAVLDKPLSSIRKTTVQVDVDIGCTETFFVSDDRTEEVVQGSKAVAVRKHRLRLESSPFLKRDFQWSVVDLDNWMKGNTFW 340
            TRGWSSSGFA PGGDAGAAEMPGLPSAFPWREA DNRG+RGL ERAM+SVMQHQHRRFLRAATKLDDADDDAFL       V+     G+    A     P   GG          G R ++          DGLPVWDIPEGALVDPRDVMHKDLAEFY+QAAVAAKVSRSTPFYRLHGF+SCE+SNVNVLWGAQRGDLPEEGETIEIWGSKY LKS+L+DIKAIS YR++KDRA LDKPLSSIRKTTVQVDVDIGCTETFFVSD+RTEE                              VVDLDNWMKGNTFW
Sbjct:   55 TRGWSSSGFATPGGDAGAAEMPGLPSAFPWREATDNRGMRGLVERAMYSVMQHQHRRFLRAATKLDDADDDAFLATCRRNGVRPGGRRGLPDASASGYRTPHQRGGRRRKGVFGIGGPREEKACVYPTLYPGDGLPVWDIPEGALVDPRDVMHKDLAEFYVQAAVAAKVSRSTPFYRLHGFTSCEISNVNVLWGAQRGDLPEEGETIEIWGSKYVLKSVLEDIKAISRYRVNKDRAGLDKPLSSIRKTTVQVDVDIGCTETFFVSDNRTEE------------------------------VVDLDNWMKGNTFW 339
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1503.3566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JXD5_9PHAE1.890e-21787.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFT8_ECTSI7.790e-13969.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..340
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1503contigE-fasciculatus_F_contig1503:11879..15220 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1503.3566.1mRNA_E-fasciculatus_F_contig1503.3566.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1503 11488..16268 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1503.3566.1 ID=prot_E-fasciculatus_F_contig1503.3566.1|Name=mRNA_E-fasciculatus_F_contig1503.3566.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=341bp
MMRPPLARRAAAGYVLSCGRRRRAPPSPSSFTGQTPTRGWSSSGFAAPGG
DAGAAEMPGLPSAFPWREAPDNRGVRGLAERAMHSVMQHQHRRFLRAATK
LDDADDDAFLRAAEMAFVQVAAGVFQMPAHQVIAPLANGGGGEGKASSES
GDRGKRRDGLPVWDIPEGALVDPRDVMHKDLAEFYLQAAVAAKVSRSTPF
YRLHGFSSCEVSNVNVLWGAQRGDLPEEGETIEIWGSKYALKSLLQDIKA
ISSYRLSKDRAVLDKPLSSIRKTTVQVDVDIGCTETFFVSDDRTEEVVQG
SKAVAVRKHRLRLESSPFLKRDFQWSVVDLDNWMKGNTFW*
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