mRNA_E-fasciculatus_F_contig15017.3559.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15017.3559.1 vs. uniprot
Match: D7FYG7_ECTSI (bPH_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYG7_ECTSI) HSP 1 Score: 163 bits (412), Expect = 6.610e-49 Identity = 76/79 (96.20%), Postives = 78/79 (98.73%), Query Frame = 1
Query: 1 QIVSGWNGKDTTEVVYPDIVDMVYVWRFFGRCGDVVLTLRDGSKLEIRSLPDFERNYNYIRERTSASCQEKSAALKPQN 237
+IVSGWNGKDTTEVVYPDIVDMVYVWRFFGRCGD+VLTLRDGSKLEIRSLPDFERNYNYIRERTSASCQEKSA LKPQN
Sbjct: 162 KIVSGWNGKDTTEVVYPDIVDMVYVWRFFGRCGDLVLTLRDGSKLEIRSLPDFERNYNYIRERTSASCQEKSAVLKPQN 240
BLAST of mRNA_E-fasciculatus_F_contig15017.3559.1 vs. uniprot
Match: A0A836CBY9_9STRA (bPH_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBY9_9STRA) HSP 1 Score: 114 bits (285), Expect = 7.230e-30 Identity = 52/76 (68.42%), Postives = 64/76 (84.21%), Query Frame = 1
Query: 1 QIVSGWNGKDTTEVVYPDIVDMVYVWRFFGRCGDVVLTLRDGSKLEIRSLPDFERNYNYIRERTSASCQEKSAALK 228
++VSG NG+D TEVVYPDI MVYV+R FGRCGDVV+ LRDGSKLE+RSLP+FE NYN+I RT+++CQE S +K
Sbjct: 148 RVVSGINGRDETEVVYPDIKRMVYVYRMFGRCGDVVMELRDGSKLELRSLPNFEENYNFILSRTTSACQEVSDTIK 223
BLAST of mRNA_E-fasciculatus_F_contig15017.3559.1 vs. uniprot
Match: A0A7S2UZ45_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ45_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.500e-23 Identity = 45/77 (58.44%), Postives = 56/77 (72.73%), Query Frame = 1
Query: 4 IVSGWNGKDTTEVVYPDIVDMVYVWRFFGRCGDVVLTLRDGSKLEIRSLPDFERNYNYIRERTSASCQEKSAALKPQ 234
+ SG+ GKD TEV YP+I DM Y++R FG GDV +TLRDGSKLE+RSLP+FE NY YI + S S Q S+ +K Q
Sbjct: 138 VTSGFGGKDQTEVAYPEIKDMKYIYRAFGAAGDVAITLRDGSKLELRSLPNFEENYRYIYSQLSPSAQAASSQIKDQ 214
BLAST of mRNA_E-fasciculatus_F_contig15017.3559.1 vs. uniprot
Match: A0A7R9UCQ1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCQ1_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 3.850e-21 Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 1
Query: 1 QIVSGWNGKDTTEVVYPDIVDMVYVWRFFGRCGDVVLTLRDGSKLEIRSLPDFERNYNYIRERTSASCQEKSAALK 228
++ SG+ G+D TE++YPDI M Y WR FG GDVV+ LRDG+++E+RSLP+FER Y I R S QE+S ++K
Sbjct: 127 RVTSGYQGQDETEIIYPDIKSMKYAWRSFGAAGDVVIELRDGARVEMRSLPEFERLYKEIFSRISEDAQEESDSMK 202
BLAST of mRNA_E-fasciculatus_F_contig15017.3559.1 vs. uniprot
Match: A0A8J5XA73_DIALT (bPH_2 domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XA73_DIALT) HSP 1 Score: 87.8 bits (216), Expect = 6.720e-20 Identity = 39/71 (54.93%), Postives = 52/71 (73.24%), Query Frame = 1
Query: 4 IVSGWNGKDTTEVVYPDIVDMVYVWRFFGRCGDVVLTLRDGSKLEIRSLPDFERNYNYIRERTSASCQEKS 216
I SGW G D EVVY DI + +++RF G GD+V+ L DG+KLEIRS+PDFE+NY+YI + S +C+E S
Sbjct: 113 IQSGWGGNDLVEVVYRDITKVNFIFRFGGLAGDMVMQLSDGAKLEIRSMPDFEKNYDYIMSQVSEACREAS 183
BLAST of mRNA_E-fasciculatus_F_contig15017.3559.1 vs. uniprot
Match: W7TZL4_9STRA (Eribonuclease p n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZL4_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 8.840e-18 Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 1
Query: 4 IVSGWNGKDTTEVVYPDIVDMVYVWRFFGRCGDVVLTLRDGSKLEIRSLPDFERNYNYIRERTSASCQEKSAAL 225
+ SG GKD TEV+Y DI + YV+R FG GD+VL LRDG+KLEIRSLP+F YNYIR + +E++ AL
Sbjct: 152 VTSGVGGKDLTEVIYADIERINYVFRAFGTTGDMVLFLRDGAKLEIRSLPNFRDVYNYIRSQLDDDAREQTPAL 225
BLAST of mRNA_E-fasciculatus_F_contig15017.3559.1 vs. uniprot
Match: A0A2G4EVJ8_9CYAN (Ribonuclease P n=5 Tax=Microcoleaceae TaxID=1892252 RepID=A0A2G4EVJ8_9CYAN) HSP 1 Score: 80.1 bits (196), Expect = 1.610e-17 Identity = 38/73 (52.05%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 4 IVSGWNGKDTTEVVYPDIVDMVYVWRFFGRCGDVVLTLRDGSKLEIRSLPDFERNYNYIRERTSASCQEKSAA 222
I SGW G D T+V+Y DIV +V V R FG GD+V+TL+ GS+LE+RS+P F Y+YI E+ A+ Q+ +AA
Sbjct: 55 ITSGWMGGDRTDVIYSDIVKIVTVPRGFGSYGDMVITLKSGSRLELRSMPKFRSVYDYINEKLPAAAQKTNAA 127
BLAST of mRNA_E-fasciculatus_F_contig15017.3559.1 vs. uniprot
Match: UPI001F3313D7 (PH domain-containing protein n=1 Tax=Tychonema sp. BBK16 TaxID=2699888 RepID=UPI001F3313D7) HSP 1 Score: 80.1 bits (196), Expect = 1.610e-17 Identity = 38/73 (52.05%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 4 IVSGWNGKDTTEVVYPDIVDMVYVWRFFGRCGDVVLTLRDGSKLEIRSLPDFERNYNYIRERTSASCQEKSAA 222
I SGW G D T+V+Y DIV +V V R FG GD+V+TL+ GS+LE+RS+P F Y+YI E+ A+ Q+ +AA
Sbjct: 55 ITSGWMGGDRTDVIYSDIVKVVTVPRGFGTYGDMVITLKSGSRLELRSMPKFRSVYDYINEKLPAAAQKTNAA 127
BLAST of mRNA_E-fasciculatus_F_contig15017.3559.1 vs. uniprot
Match: A0A0D6KLD9_9CYAN (bPH_2 domain-containing protein n=6 Tax=Nostocales TaxID=1161 RepID=A0A0D6KLD9_9CYAN) HSP 1 Score: 79.0 bits (193), Expect = 4.470e-17 Identity = 37/75 (49.33%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 4 IVSGWNGKDTTEVVYPDIVDMVYVWRFFGRCGDVVLTLRDGSKLEIRSLPDFERNYNYIRERTSASCQEKSAALK 228
++ GW G+D T+V+Y +IV +V V R G GD+V+TLR+GS+LE+R++P+F Y YI ER A E SAA K
Sbjct: 55 VIGGWMGRDRTDVIYSEIVKIVKVPRAIGLWGDMVVTLRNGSRLEMRAIPNFREVYEYINERVVAKNPEYSAAAK 129
BLAST of mRNA_E-fasciculatus_F_contig15017.3559.1 vs. uniprot
Match: A0A1Z4G666_9CYAN (bPH_2 domain-containing protein n=4 Tax=Nostocales TaxID=1161 RepID=A0A1Z4G666_9CYAN) HSP 1 Score: 78.2 bits (191), Expect = 8.960e-17 Identity = 37/75 (49.33%), Postives = 53/75 (70.67%), Query Frame = 1
Query: 4 IVSGWNGKDTTEVVYPDIVDMVYVWRFFGRCGDVVLTLRDGSKLEIRSLPDFERNYNYIRERTSASCQEKSAALK 228
++ GW G+D T+V+Y +IV +V V R G GD+VLTLR+GS+LE+R++P+F Y+YI ER +A E S A K
Sbjct: 55 VMGGWMGRDRTDVIYSEIVKIVKVPRGLGFWGDMVLTLRNGSRLEMRAVPNFRAVYDYINERVAAKNSEYSTAAK 129 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15017.3559.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15017.3559.1 >prot_E-fasciculatus_F_contig15017.3559.1 ID=prot_E-fasciculatus_F_contig15017.3559.1|Name=mRNA_E-fasciculatus_F_contig15017.3559.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=80bp QIVSGWNGKDTTEVVYPDIVDMVYVWRFFGRCGDVVLTLRDGSKLEIRSLback to top mRNA from alignment at E-fasciculatus_F_contig15017:49..2944- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15017.3559.1 ID=mRNA_E-fasciculatus_F_contig15017.3559.1|Name=mRNA_E-fasciculatus_F_contig15017.3559.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2896bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15017:49..2944- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15017:49..2944- >mRNA_E-fasciculatus_F_contig15017.3559.1 ID=mRNA_E-fasciculatus_F_contig15017.3559.1|Name=mRNA_E-fasciculatus_F_contig15017.3559.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=480bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15017:49..2944- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |