mRNA_E-fasciculatus_F_contig15010.3557.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig15010.3557.1
Unique NamemRNA_E-fasciculatus_F_contig15010.3557.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig15010.3557.1 vs. uniprot
Match: D8LSU9_ECTSI (Acetyltransferase 1-like n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSU9_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 2.760e-76
Identity = 134/168 (79.76%), Postives = 143/168 (85.12%), Query Frame = 1
Query:    1 KTLAWTLFLRAQLEERTGFLQEAYDTLEECAALQRTMLDFLQRKGCVLRKMGALTREAETVDSARMLDKADRYMNSKATKYLPRAGQISKAEQTIAIFTRHDGDPEHNLFEMQCRCAVL--GAAAVNGPRLRSAPVRRALAVHTHFEDFVEDQFDFHTRCMRKLRCRS 498
            +TLAWTLFLRAQLEERTGFLQEAYDTLEECAALQ TMLDFLQRKG VLRKMGALTR AE VDSARMLDKADRYMNSKATKYL RAGQI KAEQTIAIFTRH+GDP+HNLFEMQC    L    A +   +   A +++ALAVHTHFEDFVEDQFDFHT CMRK+  RS
Sbjct:  444 ETLAWTLFLRAQLEERTGFLQEAYDTLEECAALQPTMLDFLQRKGRVLRKMGALTRAAEAVDSARMLDKADRYMNSKATKYLLRAGQIPKAEQTIAIFTRHEGDPQHNLFEMQCSWFELEWAEAQIRAGKPGLA-MKKALAVHTHFEDFVEDQFDFHTYCMRKVTLRS 610          
BLAST of mRNA_E-fasciculatus_F_contig15010.3557.1 vs. uniprot
Match: A0A7S1TW59_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TW59_9STRA)

HSP 1 Score: 158 bits (400), Expect = 8.740e-42
Identity = 84/170 (49.41%), Postives = 107/170 (62.94%), Query Frame = 1
Query:    7 LAWTLFLRAQLEERTGFLQEAYDTLEECAALQRTMLDFLQRKGCVLRKMGALTREAETVDSARMLDKADRYMNSKATKYLPRAGQISKAEQTIAIFTRHDGDPEHNLFEMQCRCAVLG-AAAVNGPRLRSAPVRRALAVHTHFEDFVEDQFDFHTRCMRKLRCRSIAESL 513
            L W +FL+ QL E  G L EA    EEC     T +D   RKG +L+K+G     AE VD AR +D ADRY+N+KATKYL RA ++ +AE TIA+FTRH+GDP++NLFEMQC    L  A +    R     +++  AV  HFEDF+EDQFDFHT C+RK   R+    L
Sbjct:  421 LLWAMFLKVQLLEAMGMLAEALALCEECITHTPTAIDLYMRKGRLLKKLGDTQEAAEVVDFARKIDLADRYINNKATKYLLRADRVEQAEGTIALFTRHEGDPQYNLFEMQCSWYELEWAESQQRQRKYGLALKKFFAVDKHFEDFMEDQFDFHTYCLRKGTLRAYVNLL 590          
BLAST of mRNA_E-fasciculatus_F_contig15010.3557.1 vs. uniprot
Match: A0A835YWJ9_9STRA (Acetyltransferase 1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ9_9STRA)

HSP 1 Score: 157 bits (396), Expect = 3.370e-41
Identity = 82/171 (47.95%), Postives = 114/171 (66.67%), Query Frame = 1
Query:    4 TLAWTLFLRAQLEERTGFLQEAYDTLEECAALQRTMLDFLQRKGCVLRKMGALTREAETVDSARMLDKADRYMNSKATKYLPRAGQISKAEQTIAIFTRHDGDPEHNLFEMQCRCAVLGAAAVNGPRLR-SAPVRRALAVHTHFEDFVEDQFDFHTRCMRKLRCRSIAESL 513
            TL WT+FL++ L ++ G L EA    EEC AL   +++  Q K  VL+KMGA    A+ +D+AR LD +DRY+N+K TKY+ RA ++ +AE+TIA+FTRH+GDP +NLFEMQC    L  A  +  + +    +++A AV  HF+DFVEDQ DFHT CMRK+  R+    L
Sbjct:  398 TLMWTMFLKSFLLKKQGLLDEALQVAEECIALSPEVIEMHQCKARVLKKMGAYGLAADAMDAARQLDLSDRYINNKTTKYMLRADRVPEAERTIALFTRHEGDPMYNLFEMQCSWFELEWAESHMRQGKLGLCLKKAFAVEHHFQDFVEDQVDFHTYCMRKMTLRAYVAML 568          
BLAST of mRNA_E-fasciculatus_F_contig15010.3557.1 vs. uniprot
Match: A0A3L6VQ36_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VQ36_9STRA)

HSP 1 Score: 150 bits (380), Expect = 2.630e-40
Identity = 75/168 (44.64%), Postives = 107/168 (63.69%), Query Frame = 1
Query:   13 WTLFLRAQLEERTGFLQEAYDTLEECAALQRTMLDFLQRKGCVLRKMGALTREAETVDSARMLDKADRYMNSKATKYLPRAGQISKAEQTIAIFTRHDGDPEHNLFEMQCRCAVLGAAAVNGPRLRSAP-VRRALAVHTHFEDFVEDQFDFHTRCMRKLRCRSIAESL 513
            W L+L AQ  +R   + +A   ++ C     T+L+F Q+K  +L+  G     A  VD  R LD ADRY+N+K TKYL RA +I++AE TIA+FTRH+GDP+ NL++MQC    L A A    +L + P +++ +AV  HF DF++DQFDFHT CMRK+  R+  + L
Sbjct:    5 WRLYLAAQHFDRIRDISQALVYIDRCLQHTPTVLEFYQKKAVILKHAGDYNAAATVVDQGRQLDLADRYINNKTTKYLLRANRIAQAEDTIALFTRHEGDPQQNLYDMQCMWYELAAGAAQFRQLHAGPALKKFVAVEKHFNDFLDDQFDFHTYCMRKMTLRAYVQML 172          
BLAST of mRNA_E-fasciculatus_F_contig15010.3557.1 vs. uniprot
Match: A0A225X059_9STRA (N-terminal acetyltransferase A complex subunit nat1 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A225X059_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.170e-39
Identity = 80/173 (46.24%), Postives = 113/173 (65.32%), Query Frame = 1
Query:    1 KTLAWTLFLRAQLEERTGFLQEAYDTLEECAALQRTMLDFLQRKGCVLRKMGALTREAETVDSARMLDKADRYMNSKATKYLPRAGQISKAEQTIAIFTRHDGDPEHNLFEMQCRCAVL--GAAAVNGPRLRSAPVRRALAVHTHFEDFVEDQFDFHTRCMRKLRCRSIAESL 513
            K L WT +L AQ  +R G   +A + +E+C     T+LDFLQRK  +L+ MG L + A+ +  AR LD ADRY+N+KAT+YL  A ++ +A+ TIA+FTRH+GDP+ NLF+MQC    +  G + +   +   A ++R  AV  HF DFVEDQFDFHT C+RK+  R+  + L
Sbjct:  404 KVLLWTNYLVAQHYDRLGNHAKAMEYIEKCIKQDPTLLDFLQRKARILKHMGDLNKAADVMVEARKLDLADRYINNKATEYLLHADRVEEADATIALFTRHEGDPQQNLFDMQCMWYEIECGKSQLRQKKYGLA-LKRFFAVEKHFNDFVEDQFDFHTYCIRKMTLRAYIQML 575          
BLAST of mRNA_E-fasciculatus_F_contig15010.3557.1 vs. uniprot
Match: A0A397DB15_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DB15_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.450e-39
Identity = 75/168 (44.64%), Postives = 107/168 (63.69%), Query Frame = 1
Query:   13 WTLFLRAQLEERTGFLQEAYDTLEECAALQRTMLDFLQRKGCVLRKMGALTREAETVDSARMLDKADRYMNSKATKYLPRAGQISKAEQTIAIFTRHDGDPEHNLFEMQCRCAVLGAAAVNGPRLRSAP-VRRALAVHTHFEDFVEDQFDFHTRCMRKLRCRSIAESL 513
            W L+L AQ  +R   + +A   ++ C     T+L+F Q+K  +L+  G     A  VD  R LD ADRY+N+K TKYL RA +I++AE TIA+FTRH+GDP+ NL++MQC    L A A    +L + P +++ +AV  HF DF++DQFDFHT CMRK+  R+  + L
Sbjct:  138 WRLYLAAQHFDRIRDISQALVYIDRCLQHTPTVLEFYQKKAVILKHAGDYNAAATVVDQGRQLDLADRYINNKTTKYLLRANRIAQAEDTIALFTRHEGDPQQNLYDMQCMWYELAAGAAQFRQLHAGPALKKFVAVEKHFNDFLDDQFDFHTYCMRKMTLRAYVQML 305          
BLAST of mRNA_E-fasciculatus_F_contig15010.3557.1 vs. uniprot
Match: A0A7R9UD03_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UD03_9STRA)

HSP 1 Score: 151 bits (382), Expect = 2.650e-39
Identity = 81/170 (47.65%), Postives = 108/170 (63.53%), Query Frame = 1
Query:    7 LAWTLFLRAQLEERTGFLQEAYDTLEECAALQRTMLDFLQRKGCVLRKMGALTREAETVDSARMLDKADRYMNSKATKYLPRAGQISKAEQTIAIFTRHDGDPEHNLFEMQCRCAVLG-AAAVNGPRLRSAPVRRALAVHTHFEDFVEDQFDFHTRCMRKLRCRSIAESL 513
            L + ++L+ QL E    L+EA    EEC     T +DF  RKG +L+KMG     AE +D AR +D ADRY+N+KATKYL RA ++ +AE TIA+FTRH+GDP+ NL+EMQC    L  A +    R     +++  AV  HFEDF+EDQFDFHT C+RK   R+  + L
Sbjct:  423 LLFAMYLKVQLLEAANRLEEALALAEECIEHTPTAIDFYLRKGRLLKKMGQFDAAAEVIDFARRIDLADRYVNNKATKYLLRADRVEQAESTIALFTRHEGDPQFNLYEMQCSWYELEWAESQLRQRKYGLALKKFFAVDKHFEDFMEDQFDFHTYCVRKGTLRAYVDLL 592          
BLAST of mRNA_E-fasciculatus_F_contig15010.3557.1 vs. uniprot
Match: A0A662XB91_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XB91_9STRA)

HSP 1 Score: 149 bits (377), Expect = 3.340e-39
Identity = 77/173 (44.51%), Postives = 112/173 (64.74%), Query Frame = 1
Query:    1 KTLAWTLFLRAQLEERTGFLQEAYDTLEECAALQRTMLDFLQRKGCVLRKMGALTREAETVDSARMLDKADRYMNSKATKYLPRAGQISKAEQTIAIFTRHDGDPEHNLFEMQCRCAVL--GAAAVNGPRLRSAPVRRALAVHTHFEDFVEDQFDFHTRCMRKLRCRSIAESL 513
            K L WT +L AQ  +R G   +A + +E+C   + T+LDF QRK  +L+ MG L + A+ +   R LD ADRY+N+KAT+YL  A ++ +A+ TIA+FTRH+GDP+ NLF+MQC    +  G + +   +   A ++R  AV  HF DF+EDQFDFHT C+RK+  R+  + L
Sbjct:  417 KVLLWTNYLVAQHYDRLGNFPKAIEYIEKCITQEPTVLDFFQRKARILKHMGDLNQAADVMVLGRKLDLADRYINNKATEYLLHADRVEEADATIALFTRHEGDPQQNLFDMQCMWYEIECGKSQLRQRKFGLA-LKRFFAVEKHFNDFIEDQFDFHTYCIRKMTLRAYLQML 588          
BLAST of mRNA_E-fasciculatus_F_contig15010.3557.1 vs. uniprot
Match: A0A3M6VIK2_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIK2_9STRA)

HSP 1 Score: 151 bits (381), Expect = 3.700e-39
Identity = 79/173 (45.66%), Postives = 113/173 (65.32%), Query Frame = 1
Query:    1 KTLAWTLFLRAQLEERTGFLQEAYDTLEECAALQRTMLDFLQRKGCVLRKMGALTREAETVDSARMLDKADRYMNSKATKYLPRAGQISKAEQTIAIFTRHDGDPEHNLFEMQCRCAVL--GAAAVNGPRLRSAPVRRALAVHTHFEDFVEDQFDFHTRCMRKLRCRSIAESL 513
            + L WT +L AQ  +R G   +A + +E+C   + T+LDFLQRK  +L+ MG L + A+ +   R LD ADRY+N+KAT+YL  A ++ +A+ TIA+FTRH+GDP+ NLF+MQC    +  G + +   +   A ++R  AV  HF DFVEDQFDFHT C+RK+  RS  + L
Sbjct:  560 EVLLWTKYLAAQHYDRLGDYIKAMEYVEKCIEQKPTLLDFLQRKARILKHMGDLNKAADVMVEGRKLDLADRYINNKATEYLLHADRVEEADATIALFTRHEGDPQQNLFDMQCMWYEIECGKSQLRQQKYGLA-LKRFFAVEKHFNDFVEDQFDFHTYCIRKMTLRSYIQLL 731          
BLAST of mRNA_E-fasciculatus_F_contig15010.3557.1 vs. uniprot
Match: A0A6A3FJ75_9STRA (N-terminal acetyltransferase A complex auxiliary subunit n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FJ75_9STRA)

HSP 1 Score: 150 bits (380), Expect = 4.100e-39
Identity = 78/173 (45.09%), Postives = 112/173 (64.74%), Query Frame = 1
Query:    1 KTLAWTLFLRAQLEERTGFLQEAYDTLEECAALQRTMLDFLQRKGCVLRKMGALTREAETVDSARMLDKADRYMNSKATKYLPRAGQISKAEQTIAIFTRHDGDPEHNLFEMQCRCAVL--GAAAVNGPRLRSAPVRRALAVHTHFEDFVEDQFDFHTRCMRKLRCRSIAESL 513
            K L WT +L AQ  +R G   +A + +E+C   + T+LDF QRK  +L+ MG L + A+ +   R LD ADRY+N+KAT+YL  A ++ +A+ TIA+FTRH+GDP+ NLF+MQC    +  G + +   +   A ++R  AV  HF DFVEDQFDFHT C+RK+  R+  + L
Sbjct:  403 KVLLWTNYLVAQHYDRLGNYTKAMEYIEKCITQKPTLLDFFQRKARILKHMGDLNKAADVMVEGRKLDLADRYINNKATEYLLHADRVEEADATIALFTRHEGDPQQNLFDMQCMWYEIECGKSQLRQKKYGLA-LKRFFAVEKHFNDFVEDQFDFHTYCIRKMTLRAYIQML 574          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15010.3557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSU9_ECTSI2.760e-7679.76Acetyltransferase 1-like n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S1TW59_9STRA8.740e-4249.41Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A835YWJ9_9STRA3.370e-4147.95Acetyltransferase 1-like protein n=1 Tax=Tribonema... [more]
A0A3L6VQ36_9STRA2.630e-4044.64Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A225X059_9STRA1.170e-3946.24N-terminal acetyltransferase A complex subunit nat... [more]
A0A397DB15_9STRA1.450e-3944.64Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A7R9UD03_9STRA2.650e-3947.65Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A662XB91_9STRA3.340e-3944.51Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A3M6VIK2_9STRA3.700e-3945.66Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A6A3FJ75_9STRA4.100e-3945.09N-terminal acetyltransferase A complex auxiliary s... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15010contigE-fasciculatus_F_contig15010:1..1791 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score256.5
Seed ortholog evalue8.7e-66
Seed eggNOG ortholog2880.D8LSU9
Preferred nameNAA16
KEGG koko:K20792
EggNOG free text desc.N-terminal peptidyl-methionine acetylation
EggNOG OGsKOG1156@1,KOG1156@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Exons4
Model size519
Cds size519
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15010.3557.1prot_E-fasciculatus_F_contig15010.3557.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig15010 1..1791 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927982.5371883-CDS-E-fasciculatus_F_contig15010:0..841622927982.5371883-CDS-E-fasciculatus_F_contig15010:0..84Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15010 1..84 +
1695995777.4681697-CDS-E-fasciculatus_F_contig15010:0..841695995777.4681697-CDS-E-fasciculatus_F_contig15010:0..84Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15010 1..84 +
1622927982.5538626-CDS-E-fasciculatus_F_contig15010:557..7041622927982.5538626-CDS-E-fasciculatus_F_contig15010:557..704Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15010 558..704 +
1695995777.479636-CDS-E-fasciculatus_F_contig15010:557..7041695995777.479636-CDS-E-fasciculatus_F_contig15010:557..704Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15010 558..704 +
1622927982.565914-CDS-E-fasciculatus_F_contig15010:1206..13471622927982.565914-CDS-E-fasciculatus_F_contig15010:1206..1347Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15010 1207..1347 +
1695995777.4892812-CDS-E-fasciculatus_F_contig15010:1206..13471695995777.4892812-CDS-E-fasciculatus_F_contig15010:1206..1347Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15010 1207..1347 +
1622927982.5763247-CDS-E-fasciculatus_F_contig15010:1644..17911622927982.5763247-CDS-E-fasciculatus_F_contig15010:1644..1791Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15010 1645..1791 +
1695995777.5054524-CDS-E-fasciculatus_F_contig15010:1644..17911695995777.5054524-CDS-E-fasciculatus_F_contig15010:1644..1791Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15010 1645..1791 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig15010.3557.1

>prot_E-fasciculatus_F_contig15010.3557.1 ID=prot_E-fasciculatus_F_contig15010.3557.1|Name=mRNA_E-fasciculatus_F_contig15010.3557.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=173bp
KTLAWTLFLRAQLEERTGFLQEAYDTLEECAALQRTMLDFLQRKGCVLRK
MGALTREAETVDSARMLDKADRYMNSKATKYLPRAGQISKAEQTIAIFTR
HDGDPEHNLFEMQCRCAVLGAAAVNGPRLRSAPVRRALAVHTHFEDFVED
QFDFHTRCMRKLRCRSIAESLS*
back to top

mRNA from alignment at E-fasciculatus_F_contig15010:1..1791+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig15010.3557.1 ID=mRNA_E-fasciculatus_F_contig15010.3557.1|Name=mRNA_E-fasciculatus_F_contig15010.3557.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1791bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15010:1..1791+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AAGACGTTGGCGTGGACGCTGTTCCTTCGGGCTCAGCTCGAAGAGAGGAC GGGTTTCTTGCAGGAGGCCTACGATACTCTTGAGGTTAGCAAGTGCTGCA TTTGAGGGGGGAGGGGGCGTTGAGGCGAGGGCTATGCGTGTAGATACTCG CTGCTTGCCTAGAGTCGTTTTACCGTTGGCCATACACCAGAGCCGGAGGA GCGCCGTTCCCCCTACCGTTCCCGGCGCCTGTCCTTACTCCCAGCGGAGA TGCCGCCTGCGTTCGGGTGCCGCCATGCACGCAGTACTCATGGTTCACAC TGGGGACGCGGGTGATACTGCGTTGTAGTTTGAAGATACACTGACGTCGC TTTGTTGAAGTGAAATTTTATCTCATTGTGATTTTGTCTTCGCTGTTGTG GTGGAAATGACGTGTTACATGCTGTGTGGTGTGGGGGTTCGAGTCTTGAG TAAAAATCTCAACTTTTCTTGTGTCTTTCGTTTAGCCTCCGGTTTCTTCG ATGCGAACCATCCTTTCGAACCATTCCGACCACGATTTCGGCACGTACTG CCCACAGGAATGCGCCGCGCTCCAGCGGACCATGCTTGACTTCCTGCAGC GGAAGGGCTGCGTGCTGAGGAAGATGGGGGCTCTGACGAGGGAAGCGGAG ACGGTAGACTCGGCTAGGATGCTTGACAAGGCGGACCGCTACATGAACAG CAAGGTGCGGCGCAAGTTTACCGTCTTATGTACCTAGGGTCGTTTCGTCC CGTGGGTGTTGTACGGTTCGTAGACGGAAGGCGTCCACGGTATGGCGATG CGGCCGGATGTTTGTCTCGTTTCTGTTGCTTTTGGGCTTGGCGACTTTTG TTGTTTCGTCTGTTGGTTTCCCATGGGAGTGCGGCAACAAGGCACTTCTC TCTCTGTCTCCCTGTGTGCGTGCATGTGTGTCTTTCTCTCTCTATCACTC CCCTGCTGTCTCAGTTTTTCGCACGGCAAGTTTTGCTGTTTGCGCGGTTG CCTCTCTTGTTTTCTTGCCCTTAGCACTTGTCACTGAAGAACCGTTTCCC CCGCACCCCACCGCAGGGATCGACCTGTTCGTCATTTCGACGCCCCGTTT TTGTTGCCGTTTCATGTCCCCCAGTTTCTTCCCGACCGCTATCCTCGGTT AACCACTGCCACCATCAATCCTTGACCTTTGTGCGGTCGTCTTGGCGGCG CGACAGGCTACCAAGTACTTGCCGCGTGCCGGGCAGATCTCGAAGGCGGA GCAGACGATCGCTATCTTCACGAGGCACGACGGGGACCCGGAGCACAACC TCTTCGAGATGCAGTGCAGGTGCGCCGTATTGGGTGCTGCTGCTGTCGTT TGGTTGTGTGATGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTCTGCGTTTGT TTCCTCTACTTCAAACAGCGGTACTTCAAGCAGCCGGAGGTTGTTGTTGT TGTTCCTGCTTTAAGTGGCGGCGTGTGCATGTGTTATCTCCCAGGCAAAC GTTCGGAGCACAACCGTCTCCGCGGGTGCTAAATATTTTTCATGCCCCCG CCACTGCCGCTTCCGTCTGTTGTTTGCCAGCTGGTTCGAGCTAGAATGGG CCGAGGCTCAGATCCGCGCCGGTACGCCGGGCCCTCGCGGTGCACACGCA TTTCGAGGACTTTGTGGAGGACCAATTCGACTTCCACACGCGCTGCATGC GCAAGTTGAGGTGCCGTTCCATTGCCGAATCTCTTTCATAG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15010:1..1791+

>mRNA_E-fasciculatus_F_contig15010.3557.1 ID=mRNA_E-fasciculatus_F_contig15010.3557.1|Name=mRNA_E-fasciculatus_F_contig15010.3557.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1038bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15010:1..1791+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AAGACGTTGGCGTGGACGCTGTTCCTTCGGGCTCAGCTCGAAGAGAGGAC
GGGTTTCTTGCAGGAGGCCTACGATACTCTTGAGAAGACGTTGGCGTGGA
CGCTGTTCCTTCGGGCTCAGCTCGAAGAGAGGACGGGTTTCTTGCAGGAG
GCCTACGATACTCTTGAGGAATGCGCCGCGCTCCAGCGGACCATGCTTGA
CTTCCTGCAGCGGAAGGGCTGCGTGCTGAGGAAGATGGGGGCTCTGACGA
GGGAAGCGGAGACGGTAGACTCGGCTAGGATGCTTGACAAGGCGGACCGC
TACATGAACAGCAAGGAATGCGCCGCGCTCCAGCGGACCATGCTTGACTT
CCTGCAGCGGAAGGGCTGCGTGCTGAGGAAGATGGGGGCTCTGACGAGGG
AAGCGGAGACGGTAGACTCGGCTAGGATGCTTGACAAGGCGGACCGCTAC
ATGAACAGCAAGGCTACCAAGTACTTGCCGCGTGCCGGGCAGATCTCGAA
GGCGGAGCAGACGATCGCTATCTTCACGAGGCACGACGGGGACCCGGAGC
ACAACCTCTTCGAGATGCAGTGCAGGTGCGCCGTATTGGGTGCTGCTGCT
GTCGCTACCAAGTACTTGCCGCGTGCCGGGCAGATCTCGAAGGCGGAGCA
GACGATCGCTATCTTCACGAGGCACGACGGGGACCCGGAGCACAACCTCT
TCGAGATGCAGTGCAGGTGCGCCGTATTGGGTGCTGCTGCTGTCAATGGG
CCGAGGCTCAGATCCGCGCCGGTACGCCGGGCCCTCGCGGTGCACACGCA
TTTCGAGGACTTTGTGGAGGACCAATTCGACTTCCACACGCGCTGCATGC
GCAAGTTGAGGTGCCGTTCCATTGCCGAATCTCTTTCATAGAATGGGCCG
AGGCTCAGATCCGCGCCGGTACGCCGGGCCCTCGCGGTGCACACGCATTT
CGAGGACTTTGTGGAGGACCAATTCGACTTCCACACGCGCTGCATGCGCA
AGTTGAGGTGCCGTTCCATTGCCGAATCTCTTTCATAG
back to top