mRNA_E-fasciculatus_F_contig1501.3555.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1501.3555.1 vs. uniprot
Match: D8LCE7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCE7_ECTSI) HSP 1 Score: 539 bits (1388), Expect = 3.720e-184 Identity = 260/315 (82.54%), Postives = 283/315 (89.84%), Query Frame = 1
Query: 1 QELNFATAFASATETFRTRETCIGYTGEGEDLPTGTLDEQVTRYFDDADLDETADYTHVVYIGNEDINTHSAAVDRYAIGGEGYVDP-VPFDQLYDVTDDGTATLTYEPVIAGLGESWRSGITRLIDAGVTGKILLGNIGTPEGLADFIDTDQGEFVRAVALAIRAEAQAVADEFPDQVRILDNYSIFLAIVDSPEIFENLGFVTPEGSFLADPCLDLDFAIDHLGEVGGTQALRPVGCQEECALCADNTSPCGTCFEGNPSGQVCSDPDSRLFWQPLFFTTAFHHILGEAIRQCSKDSPNYDRPMVLELCAPSR 942
QELNFATA ASATETFRTRE C GYTGEGEDLPTGTLDEQ+TRYF+DADL ETADYTH++YIGNED+N+HSAA RY+IGGEGYVDP VPFD L+DV DDGT T T+ +IA L ESWRSGI RLIDAGVTG ILLGNIG PEGL+ +I T GE VR++AL IRAEAQAVADEFPDQVRILDNY++F AIVD+PEIFENLGFV PEGSFL+DPCLDLDFA+D+LGEV GTQALRPVGCQEECALCADNTSPCGTCFEGNPSGQVCSDPDSRLFW +F+TAFHHILGEAIRQCSKDSPNYDRP+VLELC SR
Sbjct: 116 QELNFATATASATETFRTRENCEGYTGEGEDLPTGTLDEQITRYFNDADLHETADYTHIIYIGNEDLNSHSAATARYSIGGEGYVDPYVPFDMLFDVADDGTVTSTHVHIIAELAESWRSGIARLIDAGVTGTILLGNIGNPEGLSSYIGTPLGEIVRSIALTIRAEAQAVADEFPDQVRILDNYTLFSAIVDTPEIFENLGFVAPEGSFLSDPCLDLDFAVDYLGEVAGTQALRPVGCQEECALCADNTSPCGTCFEGNPSGQVCSDPDSRLFWGSRYFSTAFHHILGEAIRQCSKDSPNYDRPVVLELCGSSR 430
BLAST of mRNA_E-fasciculatus_F_contig1501.3555.1 vs. uniprot
Match: D7FJN0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJN0_ECTSI) HSP 1 Score: 327 bits (837), Expect = 2.910e-101 Identity = 165/324 (50.93%), Postives = 216/324 (66.67%), Query Frame = 1
Query: 4 ELNFATAFASATETFRTRETCIGYTGEGEDLPTGTLDEQVTRYF----DDADL--DETADYTHVVYIGNEDINTHSAAVDRYAIGGEGYVDPVPFDQLYDVT---------DDGTATLTYEPVIAGLGESWRSGITRLIDAGVTGKILLGNIGTPEGLADFIDTDQGEFVRAVALAIRAEAQAVADEFPDQVRILDNYSIFLAIVDSPEIFENLGFVTPEGSFLADPCLDLDFAIDHLGEVGGTQALRPVGCQEECALCADNTSPCGTCFEGNPSGQVCSDPDSRLFWQPLFFTTAFHHILGEAIRQCSKDSPNYDRPMVLELC 930
E NFAT+ SAT+ FR+RE C GYTGEGED PT TL+EQ+ RYF DDA DET DYTHV++IG ++N A+ RY+IGGEGY DPV FD++++V + G T+ P+I + +W GI RLIDAGVTG+ILL N+G+P+GLA T+ + VAL +R+ A+ + ++ QVR+LD Y++F A+VD +F +LGF EGS LAD C+ +F +D E+ GTQALR CQEEC LCAD+T+PC TCF P+ C DP S++F+ + FTT FH I GEAIRQCSKDSPN+DRP V +C
Sbjct: 115 EHNFATSSGSATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVDDASTTKDETLDYTHVIFIGTNELNRVVEAITRYSIGGEGYEDPVAFDKVFEVNATTGFPVLDESGLPVPTFAPMIEEVLGAWDEGIGRLIDAGVTGRILLANVGSPKGLAGIAGTETATVLDQVALFLRSGAELLVAKYAGQVRMLDMYTLFAALVDDESLFTDLGFTPGEGSLLADSCIQFNFFVDDAAEIMGTQALRNPDCQEECMLCADSTTPCATCFVDQPAITKCDDPSSKVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMC 438
BLAST of mRNA_E-fasciculatus_F_contig1501.3555.1 vs. uniprot
Match: D7FJN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN5_ECTSI) HSP 1 Score: 319 bits (817), Expect = 6.230e-98 Identity = 166/352 (47.16%), Postives = 224/352 (63.64%), Query Frame = 1
Query: 4 ELNFATAFASATETFRTRETCIGYTGEGEDLPTGTLDEQVTRYFDDA--DLDETADYTHVVYIGNEDINTHSAAVDRYAIGGEGYVDPVPFDQLYDVTD---------DGTATLTYEPVIAGLGESWRSGITRLIDAGVTGKILLGNIGTPEGLADFIDTDQGEFVRAVALAIRAEAQAVADEFPDQVRILDNYSIFLAIVDSPEIFENLGFVTPEGSFLADPCLDLDFAIDHLGEVGGTQALRPVGCQEECALCADNTSPCGTCFEGNPSGQVCSDPDSRLFWQPLFFTTAFHHILGEAIRQCSKDSPNYDRPMVLELCAPSR*MTNQIRRGLIDYI-LVIFLFDCSALGP 1023
E NFAT+ ASAT+ FR+RE C GYTGEGED PT TL+EQ+ RYF + + DET DYTHV++IG ++N A+ RY+ GGEGY DPV F+++++V G T+ P+I + +W GI RLI AGVTG+ILL N+G+P+GL T+ + +VA A+R AQ + ++ QVR+LD Y++F A+VD IF +LGF EGS LAD C+ ++F +D E+ GTQALR CQEEC LCAD+T+PC TC P+ C DP +++F+ + FTT FH I GEAIRQCSKDSPN+DRP V +C T + + Y+ L + L D A+ P
Sbjct: 111 EHNFATSSASATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVNETDETLDYTHVIFIGTNELNRVVEAITRYSTGGEGYEDPVAFEKVFEVDATTGFPVFDASGLPVPTFAPMIEEVLGAWDEGIGRLIGAGVTGRILLANVGSPKGLTGIAGTETAILLDSVAQALRVGAQLLVAKYSHQVRMLDLYTLFAALVDDESIFTDLGFTPGEGSLLADSCIQVNFFVDDAAEIMGTQALRNPDCQEECTLCADSTTPCATCLVDQPAITKCDDPSNKVFYDGVHFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMCPEEEWCTASVSQSGKRYVRLPVDLTDLWAVWP 462
BLAST of mRNA_E-fasciculatus_F_contig1501.3555.1 vs. uniprot
Match: D7FYC5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYC5_ECTSI) HSP 1 Score: 313 bits (803), Expect = 2.790e-96 Identity = 158/324 (48.77%), Postives = 215/324 (66.36%), Query Frame = 1
Query: 4 ELNFATAFASATETFRTRETCIGYTGEGEDLPTGTLDEQVTRYF----DDADL--DETADYTHVVYIGNEDINTHSAAVDRYAIGGEGYVDPVPFDQLYDVT---------DDGTATLTYEPVIAGLGESWRSGITRLIDAGVTGKILLGNIGTPEGLADFIDTDQGEFVRAVALAIRAEAQAVADEFPDQVRILDNYSIFLAIVDSPEIFENLGFVTPEGSFLADPCLDLDFAIDHLGEVGGTQALRPVGCQEECALCADNTSPCGTCFEGNPSGQVCSDPDSRLFWQPLFFTTAFHHILGEAIRQCSKDSPNYDRPMVLELC 930
E NFAT+ A+AT+ FR+RE C GYTGEGED PT TL+EQ+ RYF DD ++T DYTHV++IG ++ +AAV RY+IGGEGY DPV FD++++V ++G T+ P+I + +W GI RLI AGVTG+ILL N+G+ +GL T+ + + L +R+ A+ + D++ QVR+LD Y++F A+VD IF +LGF EGS LA+ C+ +F +D E+ GTQALR CQEECALCAD+T+PC TC P+ C DP +++F+ + FTT FH +LGEAIRQCSKDSPN+DR V LC
Sbjct: 109 EHNFATSSATATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVDDTSTTTNDTLDYTHVIFIGINELIMAAAAVTRYSIGGEGYQDPVAFDKVFEVNATTGLPVLDENGLPVPTFTPMIEEVLGAWDEGIARLIGAGVTGRILLANVGSLKGLDGIAGTETATVLDQITLVLRSGAELLVDKYAGQVRMLDMYTLFAALVDDESIFLDLGFTPGEGSLLAETCIQFNFVVDDAAEIMGTQALRNPDCQEECALCADSTTPCATCLVDQPAVTKCDDPSTKIFYDSIHFTTDFHLVLGEAIRQCSKDSPNFDRAFVGVLC 432
BLAST of mRNA_E-fasciculatus_F_contig1501.3555.1 vs. uniprot
Match: A0A6H5KNY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY6_9PHAE) HSP 1 Score: 132 bits (331), Expect = 4.260e-32 Identity = 60/122 (49.18%), Postives = 77/122 (63.11%), Query Frame = 1
Query: 565 AIVDSPEIFENLGFVTPEGSFLADPCLDLDFAIDHLGEVGGTQALRPVGCQEECALCADNTSPCGTCFEGNPSGQVCSDPDSRLFWQPLFFTTAFHHILGEAIRQCSKDSPNYDRPMVLELC 930
A+VD I +LGF EGS LA C+ + +D E+ TQALR CQEEC LCAD+T+PC TC P+ C +P +++F+ + FTT FH GEAIRQCSKDSPN+DR V +C
Sbjct: 32 ALVDDESIVSDLGFTPGEGSLLAYSCIQFNLFVDDAAEIMRTQALRNPDCQEECTLCADSTAPCATCLVDQPAITKCKEPSTKIFYDGIHFTTDFHLTFGEAIRQCSKDSPNFDRAFVGVIC 153
BLAST of mRNA_E-fasciculatus_F_contig1501.3555.1 vs. uniprot
Match: A0A6H5KTW7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTW7_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 1.660e-11 Identity = 39/100 (39.00%), Postives = 60/100 (60.00%), Query Frame = 1
Query: 163 DYTHVVYIGNEDINTHSAAVDRYAIGGEGYVDPVPFDQLYDVT---------DDGTATLTYEPVIAGLGESWRSGITRLIDAGVTGKILLGNIGTPEGLA 435
DYTHV +IG ++N A+ RY+ GG+ Y DPV F+++++V + T+ P+I + +W I RLI AG+TG+I L N+G+P+GLA
Sbjct: 100 DYTHVAFIGANEMNRVIEAITRYSTGGQSYQDPVAFEKVFEVDATTGFPVLHESSLPVPTFAPIIEEVLGAWDEVIGRLIGAGITGRIHLANVGSPKGLA 199 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1501.3555.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1501.3555.1 >prot_E-fasciculatus_F_contig1501.3555.1 ID=prot_E-fasciculatus_F_contig1501.3555.1|Name=mRNA_E-fasciculatus_F_contig1501.3555.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=315bp QELNFATAFASATETFRTRETCIGYTGEGEDLPTGTLDEQVTRYFDDADLback to top mRNA from alignment at E-fasciculatus_F_contig1501:11737..17246- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1501.3555.1 ID=mRNA_E-fasciculatus_F_contig1501.3555.1|Name=mRNA_E-fasciculatus_F_contig1501.3555.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5510bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1501:11737..17246- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1501:11737..17246- >mRNA_E-fasciculatus_F_contig1501.3555.1 ID=mRNA_E-fasciculatus_F_contig1501.3555.1|Name=mRNA_E-fasciculatus_F_contig1501.3555.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1890bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1501:11737..17246- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |