mRNA_E-fasciculatus_F_contig15007.3553.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15007.3553.1 vs. uniprot
Match: D7FIX4_ECTSI (FAD_binding_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX4_ECTSI) HSP 1 Score: 338 bits (868), Expect = 1.520e-110 Identity = 174/187 (93.05%), Postives = 177/187 (94.65%), Query Frame = 1
Query: 7 RVILAVGHSARPLYERLLDSGVSLQAKGIAVGFRIEHPQEMINELRYGAEIASMVNRGKGKVPVADYRLTQSLGGMDKSGETGQGQGQGSAKRGYQDRSCYSFCMCPGGQVVPTSVDPKEVCVNGMSFSKRESKWANAALVVSLSPKDVADDISALEGAEAGNGPLRGVRWQSAMERRAAEMGGGNL 567
RVILAVGHSARPLYERLLDSGVSL+AKGIAVGFRIEHPQEMINELRYGAEIASMV+RGKGKVPVADYRLTQSLG DKS E QG SAKRGYQDRSCYSFCMCPGGQVVPTSVDPKEVCVNGMSFSKRESKWANAALVVSLSPKDVADD+ ALEGAEAGNGPLRGVRWQSAMERRAAEMGGGNL
Sbjct: 349 RVILAVGHSARPLYERLLDSGVSLEAKGIAVGFRIEHPQEMINELRYGAEIASMVDRGKGKVPVADYRLTQSLG-ADKSDEARQG----SAKRGYQDRSCYSFCMCPGGQVVPTSVDPKEVCVNGMSFSKRESKWANAALVVSLSPKDVADDVFALEGAEAGNGPLRGVRWQSAMERRAAEMGGGNL 530
BLAST of mRNA_E-fasciculatus_F_contig15007.3553.1 vs. uniprot
Match: A0A6H5JX72_9PHAE (FAD_binding_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX72_9PHAE) HSP 1 Score: 291 bits (745), Expect = 2.010e-91 Identity = 153/187 (81.82%), Postives = 155/187 (82.89%), Query Frame = 1
Query: 7 RVILAVGHSARPLYERLLDSGVSLQAKGIAVGFRIEHPQEMINELRYGAEIASMVNRGKGKVPVADYRLTQSLGGMDKSGETGQGQGQGSAKRGYQDRSCYSFCMCPGGQVVPTSVDPKEVCVNGMSFSKRESKWANAALVVSLSPKDVADDISALEGAEAGNGPLRGVRWQSAMERRAAEMGGGNL 567
RVILAVGHSARPLYERLLDSGV L+AKGIAVGFRIEHPQ VPVADYRLTQSLG MDK E GQ SAKRGYQDRSCYSFCMCPGGQVVPTSVDPKEVCVNGMSFSKRESKWANAALVVSLSPKDVADD+SALEGAEAGNGPLRGVRWQSAMERRAAEMGGGNL
Sbjct: 480 RVILAVGHSARPLYERLLDSGVGLEAKGIAVGFRIEHPQ----------------------VPVADYRLTQSLGAMDKPDEAGQR----SAKRGYQDRSCYSFCMCPGGQVVPTSVDPKEVCVNGMSFSKRESKWANAALVVSLSPKDVADDVSALEGAEAGNGPLRGVRWQSAMERRAAEMGGGNL 640
BLAST of mRNA_E-fasciculatus_F_contig15007.3553.1 vs. uniprot
Match: A0A836CLD3_9STRA (DAO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD3_9STRA) HSP 1 Score: 203 bits (517), Expect = 3.480e-58 Identity = 111/213 (52.11%), Postives = 134/213 (62.91%), Query Frame = 1
Query: 10 VILAVGHSARPLYERLLDSGVSLQAK---------------------GIAVGFRIEHPQEMINELRYGA------EIASMVNRGKGKVPVADYRLTQSLGGMDKSGETGQGQGQGSAKRGYQDRSCYSFCMCPGGQVVPTSVDPKEVCVNGMSFSKRESKWANAALVVSLSPKDVADDISALEGAEAGNGPLRGVRWQSAMERRAAEMGGGNL 567
V+L +GHSARPLYERLLD G+ L+ K GIAVGFR+EHPQ++I+ ++YGA +++ V RGKG VPVADY+L LGG R+CYSFCMCPGGQ+VPTSVDP+EVCVNGMSFSKR SKWAN+ALVV++SP D+ D G+GPLRGV WQ MERRAA GGG+L
Sbjct: 331 VVLGIGHSARPLYERLLDGGLHLEPKVCARDVSAEPWLRAPICDYTQGIAVGFRVEHPQDLIDYIQYGAFSAEYGALSAEVLRGKGPVPVADYKLVADLGG---------------------GRACYSFCMCPGGQIVPTSVDPREVCVNGMSFSKRGSKWANSALVVNISPDDMRDF--------GGDGPLRGVYWQQEMERRAARAGGGDL 514
BLAST of mRNA_E-fasciculatus_F_contig15007.3553.1 vs. uniprot
Match: A0A1Z5R2J8_SORBI (FAD_binding_2 domain-containing protein n=3 Tax=PACMAD clade TaxID=147370 RepID=A0A1Z5R2J8_SORBI) HSP 1 Score: 190 bits (482), Expect = 1.970e-55 Identity = 98/186 (52.69%), Postives = 124/186 (66.67%), Query Frame = 1
Query: 10 VILAVGHSARPLYERLLDSGVSLQAKGIAVGFRIEHPQEMINELRYGAEIASMVNRGKGKVPVADYRLTQSLGGMDKSGETGQGQGQGSAKRGYQDRSCYSFCMCPGGQVVPTSVDPKEVCVNGMSFSKRESKWANAALVVSLSPKDVADDISALEGAEAGNGPLRGVRWQSAMERRAAEMGGGNL 567
V+LAVGHSAR Y L V + K AVG RIEHPQE+IN ++Y +E+A+ V RG+G++PVADY++ +S+G D E G + RSCYSFCMCPGGQVVPTS +P E+C+NGMSFS+R SKWAN+ALVV++S +D S +GPL GV +Q ERRAA MGGGN
Sbjct: 113 VVLAVGHSARDTYSMLWQHNVDMSPKSFAVGLRIEHPQELINSIQY-SELAAEVQRGRGRIPVADYKIAKSVGERDTENELGIAE---------PSRSCYSFCMCPGGQVVPTSTNPSELCINGMSFSRRASKWANSALVVTVSSQDFKPFQS--------HGPLAGVEFQREFERRAAMMGGGNF 280
BLAST of mRNA_E-fasciculatus_F_contig15007.3553.1 vs. uniprot
Match: A0A1Z5R3A1_SORBI (Uncharacterized protein n=5 Tax=Panicoideae TaxID=147369 RepID=A0A1Z5R3A1_SORBI) HSP 1 Score: 190 bits (482), Expect = 3.640e-54 Identity = 98/186 (52.69%), Postives = 124/186 (66.67%), Query Frame = 1
Query: 10 VILAVGHSARPLYERLLDSGVSLQAKGIAVGFRIEHPQEMINELRYGAEIASMVNRGKGKVPVADYRLTQSLGGMDKSGETGQGQGQGSAKRGYQDRSCYSFCMCPGGQVVPTSVDPKEVCVNGMSFSKRESKWANAALVVSLSPKDVADDISALEGAEAGNGPLRGVRWQSAMERRAAEMGGGNL 567
V+LAVGHSAR Y L V + K AVG RIEHPQE+IN ++Y +E+A+ V RG+G++PVADY++ +S+G D E G + RSCYSFCMCPGGQVVPTS +P E+C+NGMSFS+R SKWAN+ALVV++S +D S +GPL GV +Q ERRAA MGGGN
Sbjct: 259 VVLAVGHSARDTYSMLWQHNVDMSPKSFAVGLRIEHPQELINSIQY-SELAAEVQRGRGRIPVADYKIAKSVGERDTENELGIAE---------PSRSCYSFCMCPGGQVVPTSTNPSELCINGMSFSRRASKWANSALVVTVSSQDFKPFQS--------HGPLAGVEFQREFERRAAMMGGGNF 426
BLAST of mRNA_E-fasciculatus_F_contig15007.3553.1 vs. uniprot
Match: A0A8K0HJ08_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0HJ08_9ROSA) HSP 1 Score: 191 bits (485), Expect = 8.440e-54 Identity = 102/186 (54.84%), Postives = 125/186 (67.20%), Query Frame = 1
Query: 10 VILAVGHSARPLYERLLDSGVSLQAKGIAVGFRIEHPQEMINELRYGAEIASMVNRGKGKVPVADYRLTQSLGGMDKSGETGQGQGQGSAKRGYQDRSCYSFCMCPGGQVVPTSVDPKEVCVNGMSFSKRESKWANAALVVSLSPKDVADDISALEGAEAGNGPLRGVRWQSAMERRAAEMGGGNL 567
V+LAVGHSAR +YE LL + L +K AVG RIEHPQE+IN ++Y +A+ V G+GKVPVADY+L + + G D G A G DRSCYSFCMCPGGQVV TS +P E+C+NGMSFS+R SKWANAALVV++S +D G+ +GPL GV +Q ERRAA MGGGN
Sbjct: 391 VVLAVGHSARDIYEMLLSHNMHLISKDFAVGLRIEHPQEVINRIQYSG-VATEVRNGRGKVPVADYKLVKYISGED-----------GDAHVGAMDRSCYSFCMCPGGQVVLTSTNPSEICINGMSFSRRASKWANAALVVNVSTEDF--------GSLNFHGPLAGVEFQREFERRAAIMGGGNF 556
BLAST of mRNA_E-fasciculatus_F_contig15007.3553.1 vs. uniprot
Match: UPI001FB12872 (uncharacterized protein Cbei_0202 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB12872) HSP 1 Score: 190 bits (483), Expect = 1.400e-53 Identity = 96/186 (51.61%), Postives = 129/186 (69.35%), Query Frame = 1
Query: 10 VILAVGHSARPLYERLLDSGVSLQAKGIAVGFRIEHPQEMINELRYGAEIASMVNRGKGKVPVADYRLTQSLGGMDKSGETGQGQGQGSAKRGYQDRSCYSFCMCPGGQVVPTSVDPKEVCVNGMSFSKRESKWANAALVVSLSPKDVADDISALEGAEAGNGPLRGVRWQSAMERRAAEMGGGNL 567
V+LAVGHSAR +Y+ L+ V L K A+G RIEHPQ++INE++Y +E+A+ V G+GK+PVADY++ +S+ + T S+ RG + R CYSFCMCPGGQVV TS +P E+C NGMSFS+R SKWANAALVV++SP+D AD +GPL GV +Q +E+RAA +GGG+
Sbjct: 373 VVLAVGHSARDIYQMLVSHDVDLVPKDFAIGLRIEHPQQLINEIQY-SEMAAAVQNGRGKIPVADYKIVKSIDELYSENTT-------SSSRGIRKRGCYSFCMCPGGQVVLTSTNPSEICTNGMSFSRRGSKWANAALVVTVSPEDFADFNF--------HGPLAGVEFQRELEQRAARLGGGDF 542
BLAST of mRNA_E-fasciculatus_F_contig15007.3553.1 vs. uniprot
Match: A0A1B6P8M6_SORBI (Uncharacterized protein n=11 Tax=Andropogoneae TaxID=147429 RepID=A0A1B6P8M6_SORBI) HSP 1 Score: 190 bits (482), Expect = 2.770e-53 Identity = 98/186 (52.69%), Postives = 124/186 (66.67%), Query Frame = 1
Query: 10 VILAVGHSARPLYERLLDSGVSLQAKGIAVGFRIEHPQEMINELRYGAEIASMVNRGKGKVPVADYRLTQSLGGMDKSGETGQGQGQGSAKRGYQDRSCYSFCMCPGGQVVPTSVDPKEVCVNGMSFSKRESKWANAALVVSLSPKDVADDISALEGAEAGNGPLRGVRWQSAMERRAAEMGGGNL 567
V+LAVGHSAR Y L V + K AVG RIEHPQE+IN ++Y +E+A+ V RG+G++PVADY++ +S+G D E G + RSCYSFCMCPGGQVVPTS +P E+C+NGMSFS+R SKWAN+ALVV++S +D S +GPL GV +Q ERRAA MGGGN
Sbjct: 406 VVLAVGHSARDTYSMLWQHNVDMSPKSFAVGLRIEHPQELINSIQY-SELAAEVQRGRGRIPVADYKIAKSVGERDTENELGIAE---------PSRSCYSFCMCPGGQVVPTSTNPSELCINGMSFSRRASKWANSALVVTVSSQDFKPFQS--------HGPLAGVEFQREFERRAAMMGGGNF 573
BLAST of mRNA_E-fasciculatus_F_contig15007.3553.1 vs. uniprot
Match: A0A498KDS1_MALDO (Pyr_redox_2 domain-containing protein n=6 Tax=Maleae TaxID=721813 RepID=A0A498KDS1_MALDO) HSP 1 Score: 189 bits (480), Expect = 3.940e-53 Identity = 101/186 (54.30%), Postives = 122/186 (65.59%), Query Frame = 1
Query: 10 VILAVGHSARPLYERLLDSGVSLQAKGIAVGFRIEHPQEMINELRYGAEIASMVNRGKGKVPVADYRLTQSLGGMDKSGETGQGQGQGSAKRGYQDRSCYSFCMCPGGQVVPTSVDPKEVCVNGMSFSKRESKWANAALVVSLSPKDVADDISALEGAEAGNGPLRGVRWQSAMERRAAEMGGGNL 567
V+LAVGHSAR Y+ LL + L K AVG RIEHPQE++N L+Y +A+ V RG+GKVPVADY++ + + G D G G RSCYSFCMCPGGQVV TS +P E+C+NGMSFSKR SKWANAALVV++S KD D+ L G PL GV +Q E+RAA MGGGN
Sbjct: 382 VVLAVGHSARDFYQTLLSHNIDLIPKDFAVGLRIEHPQEVVNSLQYSG-LATEVRRGRGKVPVADYKVAKYVSGKD-----------GEEPSGATSRSCYSFCMCPGGQVVLTSTNPSEICINGMSFSKRASKWANAALVVTVSAKDF--DVLNLRG------PLAGVEFQREFEQRAARMGGGNF 547
BLAST of mRNA_E-fasciculatus_F_contig15007.3553.1 vs. uniprot
Match: UPI0009012E46 (uncharacterized protein LOC109166277 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI0009012E46) HSP 1 Score: 189 bits (480), Expect = 4.480e-53 Identity = 101/186 (54.30%), Postives = 126/186 (67.74%), Query Frame = 1
Query: 10 VILAVGHSARPLYERLLDSGVSLQAKGIAVGFRIEHPQEMINELRYGAEIASMVNRGKGKVPVADYRLTQSLGGMDKSGETGQGQGQGSAKRGYQDRSCYSFCMCPGGQVVPTSVDPKEVCVNGMSFSKRESKWANAALVVSLSPKDVADDISALEGAEAGNGPLRGVRWQSAMERRAAEMGGGNL 567
V+LAVGHSAR YE LL V+L K +VGFR+EHPQE+IN ++Y +E+AS + G+G+VPVADY++ L G S + G RSCYSFCMCPGGQVV TS +P E+C+NGMSFS+R S+WANAALVV++SPKD A A + NGPL GV +Q ERRAA MGGG+
Sbjct: 392 VVLAVGHSARDTYEMLLSHNVNLVQKDFSVGFRVEHPQELINTIQY-SELASEIISGRGRVPVADYKVMGHL----------NSDGMDSPESGPPGRSCYSFCMCPGGQVVLTSTNPSELCINGMSFSRRSSRWANAALVVTISPKDFA--------ALSLNGPLAGVEFQRIFERRAAVMGGGSF 558 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15007.3553.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15007.3553.1 >prot_E-fasciculatus_F_contig15007.3553.1 ID=prot_E-fasciculatus_F_contig15007.3553.1|Name=mRNA_E-fasciculatus_F_contig15007.3553.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=189bp MSRVILAVGHSARPLYERLLDSGVSLQAKGIAVGFRIEHPQEMINELRYGback to top mRNA from alignment at E-fasciculatus_F_contig15007:196..2454+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15007.3553.1 ID=mRNA_E-fasciculatus_F_contig15007.3553.1|Name=mRNA_E-fasciculatus_F_contig15007.3553.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2259bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15007:196..2454+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15007:196..2454+ >mRNA_E-fasciculatus_F_contig15007.3553.1 ID=mRNA_E-fasciculatus_F_contig15007.3553.1|Name=mRNA_E-fasciculatus_F_contig15007.3553.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1134bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15007:196..2454+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |