mRNA_E-fasciculatus_F_contig15006.3552.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15006.3552.1 vs. uniprot
Match: D7G7A9_ECTSI (Cation efflux protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A9_ECTSI) HSP 1 Score: 406 bits (1043), Expect = 4.450e-137 Identity = 221/234 (94.44%), Postives = 224/234 (95.73%), Query Frame = 1
Query: 1 RFEAVGAFIIAVMLMGAGYGIGNHSFETLREVINGGAHAAIPTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRRK------QVPGVVSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVETKPCPAMSSLRPQEDIEQ 684
RFEAVGAFIIA+MLMGAGYGIGNHSFETLREVI+ G HAAIPTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSM GAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRRK QVPGV+SFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVE KPCPAMSSLRPQEDIEQ
Sbjct: 286 RFEAVGAFIIALMLMGAGYGIGNHSFETLREVISRGEHAAIPTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMSGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRRKVAEIATQVPGVLSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVEPKPCPAMSSLRPQEDIEQ 519
BLAST of mRNA_E-fasciculatus_F_contig15006.3552.1 vs. uniprot
Match: A0A7S4DFL3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFL3_HETAK) HSP 1 Score: 227 bits (579), Expect = 2.270e-68 Identity = 127/250 (50.80%), Postives = 174/250 (69.60%), Query Frame = 1
Query: 1 RFEAVGAFIIAVMLMGAGYGIGNHSFETLREVI--------------NGGAHAAI--PTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRRK------QVPGVVSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVETKPCPAMSSLRPQEDIEQ 684
RFEAVGAFIIA+ML+ A YG+GNHS+E+ + I +GG + PT++ VAA +SI++KE L+R T +G+R NSQVLIANAWHHR+DA+SSV+A + I G+M G P+LD +AGLMVAGM++LTG+Q+ +++ QLTD A+ D + +V GV+ FD +RARRMG Q LVD+ IQ D ISA+AA QI +R RW +L +P V+DV+V ++ E KPCP +SSL QE I++
Sbjct: 183 RFEAVGAFIIAMMLIAASYGLGNHSYESFLKAIGYMKIPALGIGGNLDGGVPTSELQPTKIALVAAVISIVSKELLYRVTAKVGERLNSQVLIANAWHHRSDALSSVIAFVGIGGAMMGVPVLDSLAGLMVAGMLSLTGLQLGWESVKQLTDTAENDCIDEIGAAVGKVEGVLGFDNLRARRMGSQMLVDVRIQCDPYISATAAHQIAERTRWHVLKIVPQVSDVLVTVSGEQKPCPVVSSLPTQEKIQE 432
BLAST of mRNA_E-fasciculatus_F_contig15006.3552.1 vs. uniprot
Match: A0A7S2RL19_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RL19_9STRA) HSP 1 Score: 207 bits (528), Expect = 1.810e-61 Identity = 118/240 (49.17%), Postives = 156/240 (65.00%), Query Frame = 1
Query: 1 RFEAVGAFIIAVMLMGAGYGIGNHSFETLREVINGGAHA-----AIPTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRRK------QVPGVVSFDR--VRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVETKPCPAMSSLRPQEDIE 681
RFEA+GA IA +L +G G H++ +L E A + PT L AA VSI++KE L+RAT +G+R NSQVLIANAWHHR+DA SSVVAL+ I G++ G P+LDP+AGL VAGMVA+TG+QV D++ QLTD D + ++ GVVS D+ VRARRMG LVDL +Q + AS A QI + VRW IL +P V++V+V++ + + CP M+ LRP E IE
Sbjct: 74 RFEALGALAIAALLASTAFGFGGHAYHSLTEFSRASAAGMDLATSTPTLLAVAAAVVSILSKEVLYRATAVVGQRLNSQVLIANAWHHRSDAFSSVVALVGIVGALLGQPILDPLAGLCVAGMVAITGLQVGWDSLTQLTDTVDDEAVKRASEIAMNCDGVVSVDQKNVRARRMGSDILVDLRVQISPHVPASGANQIAEAVRWRILESMPAVSEVLVHVVSQPQSCPMMAQLRPAEAIE 313
BLAST of mRNA_E-fasciculatus_F_contig15006.3552.1 vs. uniprot
Match: A0A7S2RMB7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMB7_9STRA) HSP 1 Score: 207 bits (528), Expect = 5.200e-60 Identity = 118/240 (49.17%), Postives = 156/240 (65.00%), Query Frame = 1
Query: 1 RFEAVGAFIIAVMLMGAGYGIGNHSFETLREVINGGAHA-----AIPTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRRK------QVPGVVSFDR--VRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVETKPCPAMSSLRPQEDIE 681
RFEA+GA IA +L +G G H++ +L E A + PT L AA VSI++KE L+RAT +G+R NSQVLIANAWHHR+DA SSVVAL+ I G++ G P+LDP+AGL VAGMVA+TG+QV D++ QLTD D + ++ GVVS D+ VRARRMG LVDL +Q + AS A QI + VRW IL +P V++V+V++ + + CP M+ LRP E IE
Sbjct: 235 RFEALGALAIAALLASTAFGFGGHAYHSLTEFSRASAAGMDLATSTPTLLAVAAAVVSILSKEVLYRATAVVGQRLNSQVLIANAWHHRSDAFSSVVALVGIVGALLGQPILDPLAGLCVAGMVAITGLQVGWDSLTQLTDTVDDEAVKRASEIAMNCDGVVSVDQKNVRARRMGSDILVDLRVQISPHVPASGANQIAEAVRWRILESMPAVSEVLVHVVSQPQSCPMMAQLRPAEAIE 474
BLAST of mRNA_E-fasciculatus_F_contig15006.3552.1 vs. uniprot
Match: A0A7S2V756_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V756_9STRA) HSP 1 Score: 193 bits (490), Expect = 7.540e-56 Identity = 119/278 (42.81%), Postives = 160/278 (57.55%), Query Frame = 1
Query: 1 RFEAVGAFIIAVMLMGAGYGIGNHSFETLREVIN----------------------GGAHAAI----------------------PTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRRK------QVPGVVSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVE-TKPCPAMSSLRPQEDIE 681
RFEAVGAF+I+VMLM AGY +GNH++E+ + G A A++ P ++ VAA VSI++KE L+R T +GK+ NSQVLIANAWHHR+DA+SS VA+ I G+ G P+LDP+AGLMV+ M+ LTG+Q D++ LTD AD + K QV GV ++RAR MG TLVD+ I T ISASAA Q+ +R RW +L +P V+DV+V + K CP ++LRP +IE
Sbjct: 77 RFEAVGAFVISVMLMSAGYSLGNHAYESFLRALPYSGIPTSLAGWKVGLLSMMGHMGAASASVTGSAXXXXXXXXXXXVEGFAGMPGKIALVAALVSIVSKELLYRVTARVGKKLNSQVLIANAWHHRSDALSSFVAVGGIVGATMGLPVLDPLAGLMVSAMLTLTGLQCGWDSVKALTDTADTAMVSKLGALLDQVEGVQGHSQLRARSMGSDTLVDVKIHTHPRISASAAHQVAERARWHLLRNVPMVSDVLVTLDTSGDKICPVTATLRPHSEIE 354
BLAST of mRNA_E-fasciculatus_F_contig15006.3552.1 vs. uniprot
Match: A0A7S3FI97_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FI97_9EUKA) HSP 1 Score: 180 bits (456), Expect = 5.700e-52 Identity = 103/241 (42.74%), Postives = 156/241 (64.73%), Query Frame = 1
Query: 1 RFEAVGAFIIAVMLMGAGYGIGNHSFETLREVINGGAHAAIPTRLTAV-AASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRRK------QVPGVVSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNI--AVETKPCPAMSS----LRPQEDIEQ 684
RFE++G+ I+ +L+GAG G S+ LR + A P A+ AA SI++KEAL+RAT A+G+++ SQ+LIANAWHHR+DA+SSVVAL+ IAGS+ G +LDP+AG++VAG+V+ G+++ ++++QLTD +DYD+ + VPGV + +R R MG +LVDL IQ D M+SAS A ++ + VRW + + V++V+V++ CP S LRP +E+
Sbjct: 12 RFESLGSLAISTLLLGAGCSFGASSYAALRSPV------AAPLGSIALWAALASILSKEALYRATMAVGQQQRSQILIANAWHHRSDALSSVVALVGIAGSLLGCRILDPLAGIVVAGLVSWMGIRIGVESLSQLTDTSDYDMVERIGDIARGVPGVKGVNHIRCRSMGGSSLVDLAIQVDPMLSASCAHRLAEEVRWTVADKQEGVSEVLVHVDTTAHDVTCPLQDSIVQRLRPHTQVEE 246
BLAST of mRNA_E-fasciculatus_F_contig15006.3552.1 vs. uniprot
Match: A0A2E7ZII0_9DELT (Cation transporter n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2E7ZII0_9DELT) HSP 1 Score: 176 bits (447), Expect = 5.150e-50 Identity = 102/236 (43.22%), Postives = 152/236 (64.41%), Query Frame = 1
Query: 1 RFEAVGAFIIAVMLMGAGYGIGNHSFETLREVINGGAHAAIPTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTD-AADYDV------RRKQVPGVVSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVETKPCPA-MSSLRPQEDIEQ 684
RFE VG+FIIA+ML+ G G+ H+ E + I IP L AA +SI KE L++ T IGK++NS++LIANAWHHR+DA+SS+ AL+ I+ ++ G P+LDPIAG +VAG++ +GV + ++ +LTD A+ +V + + GV F +VRARRMGP LVDL ++ + M+S SAA Q+ +RVRW IL +P V +V++++ E + +RPQ ++EQ
Sbjct: 79 RFETVGSFIIALMLVATGVGVVWHTLERIENPI-------IPGELALWAAGISIAMKEFLYQLTYRIGKKQNSRILIANAWHHRSDAISSIAALIGISVALLGFPLLDPIAGFLVAGLIIKSGVDIGYSSIRELTDEVAEQEVIGTILKTLEGIEGVEHFHQVRARRMGPHLLVDLHLEVNCMMSVSAAHQVAERVRWHILETMPAVNEVLIHVDAEQDSEEGEIVLMRPQAEVEQ 307
BLAST of mRNA_E-fasciculatus_F_contig15006.3552.1 vs. uniprot
Match: A0A3D5HED6_9DELT (Cation transporter n=5 Tax=root TaxID=1 RepID=A0A3D5HED6_9DELT) HSP 1 Score: 176 bits (445), Expect = 9.740e-50 Identity = 97/217 (44.70%), Postives = 140/217 (64.52%), Query Frame = 1
Query: 1 RFEAVGAFIIAVMLMGAGYGIGNHSFETLREVINGGAHAAIPTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTD-AADYDVRRKQ------VPGVVSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVE 630
+FE VG FIIA++L+ G G+ H F + + +P + A ++II KEALF T +G+R S+VL+ANAWHHR+DA+SSV ALL IAG+ G P++DPIAG++VAG++ TG+ + +++ +LTD + DV + + GV + +RARRMGP LVDL IQ D M+S SAA Q+ +RVR EIL +LP V +V+V++ E
Sbjct: 79 KFETVGTFIIALLLLFTGIGVAGHVFNRMDAPV-------VPGTIALWMAGIAIIVKEALFHVTRMVGRRTGSRVLMANAWHHRSDAISSVAALLGIAGAQLGIPLMDPIAGMLVAGLIIKTGIDIGYESIRELTDETVEEDVISELGKIMSGIEGVDHYHEMRARRMGPHLLVDLHIQVDSMMSISAAHQVAERVRLEILEKLPAVNEVLVHVDAE 288
BLAST of mRNA_E-fasciculatus_F_contig15006.3552.1 vs. uniprot
Match: A0A329SCH1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SCH1_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.150e-48 Identity = 109/232 (46.98%), Postives = 146/232 (62.93%), Query Frame = 1
Query: 1 RFEAVGAFIIAVMLMGAGYGIGNHSFETLREVINGGAHAAIPT---------------RLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTD---AADYDVRRKQVPG----VVSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVE 630
++EAVG+ + +L+ G GIG F+ ++E+ NG A ++P L A AA +SI AKEALF AT IGK+ NS+VLIANAWHHRTDA+SSVVAL I GSM G P+LDP+AG+ VA M+ TG ++ D++ +LTD A+ K+V V+ +VRARRMGP TLVDL + D S S AQQI +RVR IL E+P V++V+V+I V+
Sbjct: 151 KYEAVGSLSVGAILVLCGLGIGADGFQAMQEIWNGAAATSLPELNLPFLSEIDRSTQLALAAGAAGISIAAKEALFNATVKIGKQANSKVLIANAWHHRTDAISSVVALGGIIGSMAGMPLLDPVAGMAVAAMIMKTGGEICLDSVQELTDNTVEAEVLETLKEVSASVDDVLHVSQVRARRMGPYTLVDLRVHLDARTSISMAQQISERVRSYILQEVPDVSEVLVHIDVQ 382
BLAST of mRNA_E-fasciculatus_F_contig15006.3552.1 vs. uniprot
Match: W2ZQI2_PHYPR (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2ZQI2_PHYPR) HSP 1 Score: 174 bits (442), Expect = 2.340e-48 Identity = 108/232 (46.55%), Postives = 146/232 (62.93%), Query Frame = 1
Query: 1 RFEAVGAFIIAVMLMGAGYGIGNHSFETLREVINGGAHAAIPT---------------RLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTD---AADYDVRRKQVPG----VVSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVE 630
++EAVG+ + +L+ G GIG F+ L+E++NG ++P L A AA VSI AKEAL+ AT IGK+ NS+VLIANAWHHRTDA+SSVVAL I GSM G P+LDP+AG+ VA M+ TG ++ D++ +LTD A+ ++V G V+ +VRARRMGP TLVDL + S S AQQI +RVR IL E+P V++V+V+I V+
Sbjct: 151 KYEAVGSLSVGAILVLCGLGIGADGFQALQEILNGAGATSLPEFNLPFLSEIDRSTQWALAAGAAGVSIGAKEALYHATVKIGKQANSKVLIANAWHHRTDAISSVVALGGIVGSMAGVPLLDPVAGMAVAAMIVKTGGEICLDSVQELTDNTVEAEVLETLEEVSGSVDDVLHVSQVRARRMGPYTLVDLRVHLHARTSISMAQQISERVRSHILQEVPDVSEVLVHIDVQ 382 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15006.3552.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15006.3552.1 >prot_E-fasciculatus_F_contig15006.3552.1 ID=prot_E-fasciculatus_F_contig15006.3552.1|Name=mRNA_E-fasciculatus_F_contig15006.3552.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=228bp RFEAVGAFIIAVMLMGAGYGIGNHSFETLREVINGGAHAAIPTRLTAVAAback to top mRNA from alignment at E-fasciculatus_F_contig15006:21..2334- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15006.3552.1 ID=mRNA_E-fasciculatus_F_contig15006.3552.1|Name=mRNA_E-fasciculatus_F_contig15006.3552.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2314bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15006:21..2334- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15006:21..2334- >mRNA_E-fasciculatus_F_contig15006.3552.1 ID=mRNA_E-fasciculatus_F_contig15006.3552.1|Name=mRNA_E-fasciculatus_F_contig15006.3552.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1368bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15006:21..2334- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |