mRNA_E-fasciculatus_F_contig15002.3551.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15002.3551.1 vs. uniprot
Match: A0A6H5KQA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQA3_9PHAE) HSP 1 Score: 934 bits (2414), Expect = 4.220e-307 Identity = 616/782 (78.77%), Postives = 635/782 (81.20%), Query Frame = 1
Query: 1 RLVEALHDDSRVVYQGRSQSAPQQXXXXXXXXXXXXXXGSPSAAGGKPGDGLATYRCREGHVITVEMEDPSLLGSELEGCGEPRFVAGAGKALAVANWRSIGGGRG--GPGPTSVNDRSTAAAKELWGLLPSIAASGLNRFREEVSVSTTLGPAARPLEVLVSLTVPRLVVGVAAPGGAAPRPLAVEAAXXXXXXXXXXXXXXXXXXAYGSSGCPYDQKRGSRRGYGGDGVPVLRFPLTQVGEERDVFMEVANPADVPVMVQLSAGKTDSLVWQEPGTGDGQSPLAVVIAVGVDVSGFAHQQGGIRDKVGGEISAFHIHVGAFPALVLPPGGAAAIGPLRFTPMRTGTFSAHVYLRNNLTHLEPVRLEGEAGVGLFSVRPWEGGGARPGRAIVVSAASTVPPELEGGSTGTSRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALEVERFPVNFRSWAKSPPTTAPVVRRWVLSNEGTMPLVVHGVGIRRTGASAWGXXXXXXXXRRGAGGRDPSGSGGWFGRRWRALLGXXXXXXXXNAERD-VTSSVWGLWGAVSAAPATTATAAGG--IASSVLCADGGFRVLGEACQDRWRPKTLLPGQEMEVAVDYSAAHCEPVGRTLDFLSSAGTASIRMEASASGGPSAVAACKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------DARWSRAWLLVKTVVFAGALYTGGCAMLGVGPEVSQLLGWARRARARAAGCYAALAEGCGRIAVFVE 2304
RLVEALHDDSRVVY QSAPQQ SPSA GGKPGDGLATYRC EGHVITVEMEDPSL SELEGC EPRFVAGAGKALA A+WR GG G G G SVNDRSTAAAKELWGLLPSIAASGLNRFREEVSVSTTLGPAARPLEVLVSLTVPRLVVGVAA GAAP P A EAA XXXXXXXX SGCPYDQ RGSR GYGGDGVPVLRFPLTQVGEERDVF+EVANPADVPV +QLS GKTDSLVW+EPG GDG++P A VIAVGVDV GFA QQ +R K G+ISAFH+ +GAFPALVLPPGGAA IGPLRFTP RTGTFSAHVYLRNNLTHLEPV+LEGEAGVGL SVRPWEGGGARPGR +VV AASTVP E +GGST SRF XXXXXXXXXXXXXXXXXXX A EVERFPVNFRSWAKSPPTTAPVVRRWVLSNEG MPLVVHGVGIRRTGAS W XXXXXR GAGGR+PSGSGGWFGRRWRA LGXXXXXXXX V+SS+WG+WGAVSA A GG IASSVLCADGGFRVLGEACQDRWRPKTLLPGQEMEVAVDYSA+HCEPVGRTLDFLSSAGTAS+RMEASASGGPSAVAACK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DARWSRAWLLVK VVFAGALYTGGCAMLGVGPEVSQLLG ARRARARAA CYAALAEGC RIAV VE
Sbjct: 1567 RLVEALHDDSRVVY----QSAPQQDNA------------SPSA-GGKPGDGLATYRCGEGHVITVEMEDPSL-DSELEGCDEPRFVAGAGKALAAASWRDGHGGLGLGGYGAASVNDRSTAAAKELWGLLPSIAASGLNRFREEVSVSTTLGPAARPLEVLVSLTVPRLVVGVAASEGAAPCPHAAEAAANRRASEGCGXXXXXXXXX--GSGCPYDQNRGSRPGYGGDGVPVLRFPLTQVGEERDVFVEVANPADVPVSLQLSVGKTDSLVWKEPGKGDGKAPAATVIAVGVDVPGFARQQQQVRHKRAGDISAFHLRMGAFPALVLPPGGAATIGPLRFTPARTGTFSAHVYLRNNLTHLEPVQLEGEAGVGLLSVRPWEGGGARPGR-VVVGAASTVP-EPDGGSTKASRFGRGGNADATLGQQXXXXXXXXXXXXXXXXXXXEAQRQHHPRPP---APEVERFPVNFRSWAKSPPTTAPVVRRWVLSNEGNMPLVVHGVGIRRTGASGW----XXXXXRWGAGGRNPSGSGGWFGRRWRAWLGXXXXXXXXXXXXXXVSSSMWGVWGAVSAXXXXXXAAEGGGSIASSVLCADGGFRVLGEACQDRWRPKTLLPGQEMEVAVDYSASHCEPVGRTLDFLSSAGTASVRMEASASGGPSAVAACKSARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDARWSRAWLLVKAVVFAGALYTGGCAMLGVGPEVSQLLGLARRARARAASCYAALAEGCARIAVLVE 2319
BLAST of mRNA_E-fasciculatus_F_contig15002.3551.1 vs. uniprot
Match: D8LB05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB05_ECTSI) HSP 1 Score: 919 bits (2374), Expect = 2.590e-304 Identity = 591/780 (75.77%), Postives = 610/780 (78.21%), Query Frame = 1
Query: 1 RLVEALHDDSRVVYQGRSQSAPQQXXXXXXXXXXXXXXGSPSAAGGKPGDGLATYRCREGHVITVEMEDPSLLGSELEGCGEPRFVAGAGKALAVANWRSIGGGRG--GPGPTSVNDRSTAAAKELWGLLPSIAASGLNRFREEVSVSTTLGPAARPLEVLVSLTVPRLVVGVAAPGGAAPRPLAVEAAXXXXXXXXXXXXXXXXXXAYGSSGCPYDQKRGSRRGYGGDGVPVLRFPLTQVGEERDVFMEVANPADVPVMVQLSAGKTDSLVWQEPGTGDGQSPLAVVIAVGVDVSGFAHQQGGIRDKVGGEISAFHIHVGAFPALVLPPGGAAAIGPLRFTPMRTGTFSAHVYLRNNLTHLEPVRLEGEAGVGLFSVRPWEGGGARPGRAIVVSAASTVPPELEGGSTGTSRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALEVERFPVNFRSWAKSPPTTAPVVRRWVLSNEGTMPLVVHGVGIRRTGASAWGXXXXXXXX--RRGAGGRDPSGSGGWFGRRWRALLGXXXXXXXXNAERDVTSSVWGLWGAVSAAPATTATAAG--GIASSVLCADGGFRVLGEACQDRWRPKTLLPGQEMEVAVDYSAAHCEPVGRTLDFLSSAGTASIRMEASASGGPSAVAACKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------DARWSRAWLLVKTVVFAGALYTGGCAMLGVGPEVSQLLGWARRARARAAGCYAALAEGCGRIAVFVE 2304
RLVEALHDDSRV+Y QSAPQQ SPS+ GGKPGDGLATYRC EGHVITVEMEDPSL SELEGC EPRFVAGAGKALA A+WR GG G G G SVNDRSTAAAKELWGLLPSIAASGLNRFREEVSVSTTLGPAARPLEVLVSLTVPRLVVGVAA GAAP P A EAA A SSGCP DQKRGSR GYGG GVPVLRFPLTQVGEERDVF+EVANPADVPV VQLS GKTDSL W+E G GD ++P A VIAVG+DVS FA QQ +R K GEISAFH+ VGAFPALVLPPGGAA IGPLRFTP R GTFSAHVYLRNNLTHLEPVRLEGEAGVGL SVRPWEGGGARPGR +VV AASTVP E +GG T SRF XXXXXX ALEVERFPVNFRSWAKSPPTTAPVVRRWVLSNEGTMPLVVH VGIRRTGAS W XXXXXXXX RRGAG + PSG G WFGRRWRALLGXXXXXXXX ERDV+SS+WGLWGAVS IASSVLCADGGFRVLGEACQDRWRPKTLLPGQEMEVAV+YSA HCEPVGRTLDF+SSAGTASIRMEASASGGPSAVAACK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DARWSRAWLLVKTVVFAGALYTG CA+LGVGPE+SQLLG ARRARARAAGCYAALAEGCGRIAV VE
Sbjct: 1389 RLVEALHDDSRVMY----QSAPQQDNA------------SPSS-GGKPGDGLATYRCGEGHVITVEMEDPSL-DSELEGCDEPRFVAGAGKALAAASWRDGHGGLGLGGHGAASVNDRSTAAAKELWGLLPSIAASGLNRFREEVSVSTTLGPAARPLEVLVSLTVPRLVVGVAASEGAAPCPHAAEAAANRRASEGCGGAAAA---ACASSGCPCDQKRGSRPGYGGHGVPVLRFPLTQVGEERDVFVEVANPADVPVSVQLSVGKTDSLAWKELGKGDDKAPAATVIAVGIDVSSFARQQQQVRHKGAGEISAFHVRVGAFPALVLPPGGAATIGPLRFTPARMGTFSAHVYLRNNLTHLEPVRLEGEAGVGLLSVRPWEGGGARPGR-VVVGAASTVP-EPDGGLTEASRFGRGGNADATDATLGQQQKEEEGQEAHAQXXXXXXQRQHHPRPP---ALEVERFPVNFRSWAKSPPTTAPVVRRWVLSNEGTMPLVVHDVGIRRTGASGWXXXXXXXXXXXRRGAGSQGPSGRGSWFGRRWRALLGXXXXXXXXX-ERDVSSSMWGLWGAVSXXXXXXXXXXXXXSIASSVLCADGGFRVLGEACQDRWRPKTLLPGQEMEVAVNYSAEHCEPVGRTLDFVSSAGTASIRMEASASGGPSAVAACKSARRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDARWSRAWLLVKTVVFAGALYTGWCALLGVGPELSQLLGLARRARARAAGCYAALAEGCGRIAVLVE 2141
BLAST of mRNA_E-fasciculatus_F_contig15002.3551.1 vs. uniprot
Match: A0A485KBC6_9STRA (Aste57867_1754 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBC6_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.680e-6 Identity = 41/141 (29.08%), Postives = 62/141 (43.97%), Query Frame = 1
Query: 694 LRFPLTQVGEERDVFMEVANPADVPVMVQLSAGKTDSLVWQEPGTGDGQSPLAVVIAVGVDVSGFAHQQGGIRDKVGGEISAFHIHVGAFPALVLPPGGAAAIGPLRFTPMRTGTFSAHVYLRNNLTHLEPVRLEGEAGVG 1116
+ FPLTQ+G+ + F+ V NP++V + V L+ K D+ DG P G +V + H L PG + A+GP+ F P +T + +Y+RN LTH+EPV + G G
Sbjct: 810 IDFPLTQLGDVAETFVSVHNPSNVTIDVALALDKDDT---------DGFFPCPPTTTT----------TKGTSCRVEWLANGSHPFFVTSEKASLAPGESTALGPIYFAPKQTNEYVGRIYVRNTLTHIEPVVVRAHGGTG 931
BLAST of mRNA_E-fasciculatus_F_contig15002.3551.1 vs. uniprot
Match: A0A662WHL1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WHL1_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 8.790e-6 Identity = 43/163 (26.38%), Postives = 82/163 (50.31%), Query Frame = 1
Query: 679 DGVPVLRFPLTQVGEERDVFMEVANPADVPVMVQLSAGKTDSLVW---QEPGTGDGQSPLA-------VVIAVG---VDVSGFAHQQGGIRDKVGGEISAFHIHVGAFPALVLPPGGAAAIGPLRFTPMRTGTFSAHVYLRNNLTHLEPVRLEGEAGVGLFSV 1128
+ V +F LT+V ++ +F+ V NP++V V ++L+ +TD ++ +E G+G A V + + V V+ +QG +++G E+ F + +P G A +GP+ + P + S V++RN+L+H+EP+ L +G G +
Sbjct: 996 EAVEPRKFALTEVLDQNHIFVGVRNPSNVSVQMELAIAETDQALFYLCKEGWRGEGDENTAFKTDDDTVTLCLAEWRVAVADAKAEQG--EEQLGQEVPPFFFQR---QVVWVPAGQEAQLGPIYYLPSQVQEVSTTVFVRNDLSHIEPIPLLARSGKGTLEL 1153
BLAST of mRNA_E-fasciculatus_F_contig15002.3551.1 vs. uniprot
Match: A0A0A7CNC3_9STRA (Secreted protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A0A7CNC3_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 1.490e-5 Identity = 49/151 (32.45%), Postives = 68/151 (45.03%), Query Frame = 1
Query: 679 DGVPVLRFPLTQVGEERDVFMEVANPADVPVMVQLSAGK-TDSLVWQEPGTGDGQSPLAVVIAVGVDVSGFAHQQGGIRDKVGGEISAFHIHVGAFPALVLPPGGAAAIGPLRFTPMRTGTFSAHVYLRNNLTHLEPVRLEGEAGVGLFSV 1128
DG L PLT VG ++ V NPA++ + V L+ K D V+ P D AV +A+ R + G + F + A L PG +GP+RFTP + VYLRN L+H+EP+ L G G G +V
Sbjct: 893 DGAVAL--PLTHVGNTSVGYVRVENPANMTIHVALALEKDADDGVFTCPALDD-----AVCVALW-------------RSQAG---APFMLSPLAMVKQALGPGETKELGPMRFTPGHVKEYVGRVYLRNTLSHIEPIVLRGTGGQGKAAV 1020
BLAST of mRNA_E-fasciculatus_F_contig15002.3551.1 vs. uniprot
Match: A0A024TP46_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TP46_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 3.420e-5 Identity = 42/144 (29.17%), Postives = 65/144 (45.14%), Query Frame = 1
Query: 691 VLRFPLTQVGEERDVFMEVANPADVPVMVQLS--AGKTDSLVWQEPGTGDGQSPLAVVIAVGVDVSGFAHQQGGIRDKVGGEISAFHIHVGAFPALVLPPGGAAAIGPLRFTPMRTGTFSAHVYLRNNLTHLEPVRLEGEAGVG 1116
++ PLT VG ++++ V NP++V + V L+ A K + G SP VV A D A G G ++ + + L PG +GP+ F P + +YLRN L+H+EPV + G+ G G
Sbjct: 990 MVEMPLTHVGNVSEMWLTVTNPSNVTIDVALALLASKDSDEIGARGGFYTCPSPTKVVAAC-KDTWKAAVTSGD------GAVAMPAFFLSSMDKQTLAPGDTTTLGPILFAPSAAKEYVGRLYLRNTLSHIEPVVVRGQGGRG 1126 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15002.3551.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15002.3551.1 >prot_E-fasciculatus_F_contig15002.3551.1 ID=prot_E-fasciculatus_F_contig15002.3551.1|Name=mRNA_E-fasciculatus_F_contig15002.3551.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=786bp RLVEALHDDSRVVYQGRSQSAPQQQQQQQNQQNQQQENGSPSAAGGKPGDback to top mRNA from alignment at E-fasciculatus_F_contig15002:2..3139- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15002.3551.1 ID=mRNA_E-fasciculatus_F_contig15002.3551.1|Name=mRNA_E-fasciculatus_F_contig15002.3551.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3138bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15002:2..3139- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15002:2..3139- >mRNA_E-fasciculatus_F_contig15002.3551.1 ID=mRNA_E-fasciculatus_F_contig15002.3551.1|Name=mRNA_E-fasciculatus_F_contig15002.3551.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4716bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15002:2..3139- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |