mRNA_E-fasciculatus_F_contig150.3545.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig150.3545.1 vs. uniprot
Match: D8LBQ9_ECTSI (cAMP-dependent protein kinase regulatory subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBQ9_ECTSI) HSP 1 Score: 751 bits (1938), Expect = 1.480e-262 Identity = 481/643 (74.81%), Postives = 500/643 (77.76%), Query Frame = 2
Query: 647 MIAMRARCQEALSFLRYVRRVLEEKGENAAXXXXXXXAGHGWDWVEENCRCVFDLLGAVPVIGSLDPVFRRKLLWMLDLANRREGQILFRQGDKQQALWLILDGRIGVRSIDKRGIVHYAGEFNSGEVIGSILPEKRLATATCLGQCTLLQLDRATFLQALNDPEAQRAVVKKNFFRSVSLFKGLGDRDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRLLKAFVPLPDGXXXXXXXXXXXXXPXXX--------AEEKAGSELESKTETE----------------RKGTGATQRGEWTHXXXXXXXXXXXXXXXXXXXXXXXXXXRRVAGKSPSPARSNEEANIATGNTTRSTNGRGAREAPSPSAQXXXXXXXXXXPXXXXPILPXXXXXXXXLSSPTRVRYFDLGVVGRREFVGEGGFTSAAFAGAGALKAAGGMAGVDVRNGGSGKGGSLRGVGTRSSSAAAAAVGEGAPGGAGARRSVWSSCHMNRGRVVSRIGGDYLVSAFAEGRADVFAAKVSHLLPLQSAALKLCWVEGREVHKMKEREWQADALAARLRKQIAWERTKRAIVMDSIRIGVLEKRMAMAVTRAGQAERGR-VENGCRGGNGTGDRENSDAAAAVAAGLPPSHEAGG 2500
MIAMRARCQEALSFLRYVRRVLEEKGE+AA XXXXX AGHGWDWVEENCRCVFDLLGAVP+IGSLDPVFRRKLLWMLDLANR+EGQILFRQGDKQ+ LWLILDGRIGVRS DK+G+VHY GEFNSG VIGSILPEKRLATA CL QCTLLQLDRATFLQALNDPEAQRAVVKKNFFRSVSLFKGLG+RDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRLLKAFVPLPD XXXXXXXXXXXX XXX AE+KAGSELES R G ATQR EWTH XXXXXXXXXXXXXXXXXXXXXXXXX + ++P RVRYFDLGVVGRREFVGEGGFTSAAFAGAGALKAAGGMAG DVR+GGS KG L GVG S AAA GE PGGAGARRSVWSSCH NRGRVVSRIGGDYLVSAFAEGRAD+FAAKV HL PLQSAALKLCW+EGREVHKMKEREW+A ALAARLRKQIAWERTKRAIVMDSIRIGVLEKRMAM V+RA +AERGR VEN RGGNG+GDR NS+AAA AGLP SHEAGG
Sbjct: 1 MIAMRARCQEALSFLRYVRRVLEEKGEDAAAXXXXXAAGHGWDWVEENCRCVFDLLGAVPLIGSLDPVFRRKLLWMLDLANRQEGQILFRQGDKQETLWLILDGRIGVRSTDKQGVVHYTGEFNSGHVIGSILPEKRLATAICLEQCTLLQLDRATFLQALNDPEAQRAVVKKNFFRSVSLFKGLGERDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRLLKAFVPLPDDGXXXXXXXXXXXXXXXXVPARQXXRAEDKAGSELESXXXXXXXXXXXXXXXXXXXXXRIGADATQRREWTHEXXXXXXXXXXXXXXXXXXXXXXXXXPQQRAEAP------------------------------------------------------------------RVRYFDLGVVGRREFVGEGGFTSAAFAGAGALKAAGGMAGEDVRDGGSVKGRRLGGVGPGS----AAAGGEDGPGGAGARRSVWSSCHKNRGRVVSRIGGDYLVSAFAEGRADIFAAKVGHLFPLQSAALKLCWIEGREVHKMKEREWKAGALAARLRKQIAWERTKRAIVMDSIRIGVLEKRMAMTVSRAERAERGRGVENSRRGGNGSGDRNNSNAAAV--AGLPQSHEAGG 571
BLAST of mRNA_E-fasciculatus_F_contig150.3545.1 vs. uniprot
Match: A0A6H5JUG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUG7_9PHAE) HSP 1 Score: 706 bits (1823), Expect = 5.940e-244 Identity = 476/680 (70.00%), Postives = 506/680 (74.41%), Query Frame = 2
Query: 647 MIAMRARCQEALSFLRYVRRVLEEKGENAAXXXXXXXAGHGWDWVEENCRCVFDLLGAVPVIGSLDPVFRRKLLWMLDLANRREGQILFRQGDKQQALWLILDGRIGVRSIDKRGIVHYAGEFNSG------------------------------------------EVIGSILPEKRLATATCLGQCTLLQLDRATFLQALNDPEAQRAVVKKNFFRSVSLFKGLGDRDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRLLKAFVPLPDGXXXXXXXXXXXXXPXXX------------AEEKAGSELESKTETERKGTGATQRGEWTHXXXXXXXXXXXXXXXXXXXXXXXXXXRR-------VAGKSPSPARSNEEANIATGNTTRSTNGRGAREAPSPSAQXXXXXXXXXXPXXXXPILPXXXXXXXXLSSPTRVRYFDLGVVGRREFVGEGGFTSAAFAGAGALKAAGGMAGVDVRNGGSGKGGSLRGVGTRSSSAAAAAVGEGAPGGAGARRSVWSSCHMNRGRVVSRIGGDYLVSAFAEGRADVFAAKVSHLLPLQSAALKLCWVEGREVHKMKEREWQADALAARLRKQIAWERTKRAIVMDSIRIGVLEKRMAMAVTRAGQAERGR-VENGCRGGNGTGDRENSDAAAAVAAGLPPSHEAGG 2500
MIA RARC EAL FLRYVR+VLEEKGE+AAXXXXXXXAGHGWDWVEENCRCVFDLLGAVP+I SLDPVFRR+LLWMLDLANR+EGQILFRQGDKQ+ALWLILDGRIGVRS DK+G+VH+ GEFNSG +V+GSILPEKRLAT CL QCTLLQLDRATFLQALNDPEAQRAVVKKNFFRSVSLFKGLG+RDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRLLKAFVPLPD XXXXXXXXXXXXX XXX AE+KAGSELES XXXXXXXXXXXXX XXXXXXXXXXX +R VA KS S A SNE ANIA G++ R ++G GA++A SA S P RVRYFDLGVVGRREF+GEGGFTSAAFAGAGALKAAGGM G DVR+GGS KG L G R SAAA E PGGA RRSVWSSCH NRG VVSRIGGDYLVSAFAEGR D+FAAKV HLLPLQSAALKLCW+EG E HKMKEREW+ADALAA+LRKQI WERTKRAIVMDSIRIGVLEKRMAMAV+RA +AERGR VEN RG NG+G R NS+AAA A LP SHEAGG
Sbjct: 1 MIARRARCLEALRFLRYVRKVLEEKGEDAAXXXXXXXAGHGWDWVEENCRCVFDLLGAVPLIRSLDPVFRRRLLWMLDLANRQEGQILFRQGDKQEALWLILDGRIGVRSTDKQGVVHHTGEFNSGHVENLNRVVRVWRADHGFVGWSERVGSTDGKSPQLSQTPPSTQVVGSILPEKRLATVICLEQCTLLQLDRATFLQALNDPEAQRAVVKKNFFRSVSLFKGLGERDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRLLKAFVPLPDDXXXXXXXXXXXXXXXXXXXXGVPARQRRRAEDKAGSELESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXQQRAEAPRRGVARKSLS-ATSNENANIANGDSCRRSSGPGAQQALPSSASPSPS------------------------SPPMRVRYFDLGVVGRREFIGEGGFTSAAFAGAGALKAAGGMVGEDVRDGGSMKGRRLEGA--RPGSAAAGE--EDGPGGARVRRSVWSSCHKNRGVVVSRIGGDYLVSAFAEGRVDIFAAKVCHLLPLQSAALKLCWIEGCEAHKMKEREWKADALAAKLRKQIVWERTKRAIVMDSIRIGVLEKRMAMAVSRAERAERGRGVENSRRGNNGSGARTNSNAAAV--AELPQSHEAGG 649
BLAST of mRNA_E-fasciculatus_F_contig150.3545.1 vs. uniprot
Match: D7FJW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW3_ECTSI) HSP 1 Score: 131 bits (329), Expect = 1.750e-28 Identity = 72/188 (38.30%), Postives = 108/188 (57.45%), Query Frame = 2
Query: 785 ENCRCVFDLLGAVPVIGSLDPVFRRKLLWMLDLANRREGQILFRQGDKQQALWLILDGRIGVRSIDKRGIVHYAGEFNSGEVIGSILPEKRLATATCLGQCTLLQLDRATFLQALNDPEAQRAVVKKNFFRSVSLFKGLGDRDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRLLKAFVP 1348
E VFD+ +VP + SLD +++++L L + G +FRQ + Q + +IL GR+ + S G++ AG N GEVIGSI P + TA C T+L L +F +ND V KK F + ++F L D DL+ + ++F TL V+C+EG RVD++Y+V+RG LR+LKAF+P
Sbjct: 94 EEVAIVFDMFNSVPEVTSLDSIYKKQLFREFQLRHFAAGSTIFRQWEHQDKICVILRGRVHLTS-KHSGVLFQAGTCNVGEVIGSIEPIVGMLTARCEAYTTVLCLGSDSFAAVVNDSVCAERVAKKAFLKCSAVFSTLNDDDLNTVETLFTTVTLHDNQVICKEGSRVDHVYVVKRGFLRILKAFLP 280
BLAST of mRNA_E-fasciculatus_F_contig150.3545.1 vs. uniprot
Match: A0A6H5KSV6_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV6_9PHAE) HSP 1 Score: 100 bits (248), Expect = 2.120e-18 Identity = 63/191 (32.98%), Postives = 92/191 (48.17%), Query Frame = 2
Query: 785 ENCRCVFDLLGAVPVIGSLDPVFRRKLLWMLDLANRREGQILFRQGDKQQALWLILDGRIGVRSIDKRGIVHYAGEFNSGEVIGSILPEKRLATATCLGQCTLLQLDRATFLQALNDPEAQRAVVKKNFFRSVSLFKGLGDRDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRLLKAFVPLPD 1357
E VFD+ +VP + SLD +++++L L L + G +FRQ + Q +VIGSI P + TA C T+L L F +ND V KK F + ++F L D DL+ + ++F TL V+C EG RVD++Y+V+RG LR+LKAF+P D
Sbjct: 87 EEVAIVFDMFNSVPEVTSLDSIYKKQLFRELRLKHFATGSTIFRQWEHQN------------------------------KVIGSIKPIVGMLTARCETYTTVLCLGSDRFAAVVNDSVCAERVAKKAFLKCSAVFSTLNDDDLNTVETLFTAITLHDNQVICMEGSRVDHVYVVKRGFLRILKAFLPEED 247
BLAST of mRNA_E-fasciculatus_F_contig150.3545.1 vs. uniprot
Match: UPI000A2A46EA (cGMP-dependent protein kinase 1 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A46EA) HSP 1 Score: 79.0 bits (193), Expect = 2.670e-11 Identity = 53/170 (31.18%), Postives = 86/170 (50.59%), Query Frame = 2
Query: 830 IGSLDPVFRRKLLWMLDLANRREGQILFRQGDKQQALWLILDGRIGVRSIDKRGIVHYAGEFNSGEVIG--SILPE-KRLATATCLGQCTLLQLDRATFLQALNDPEAQRAVVKKNFFRSVSLFKGLGDRDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRL 1330
+ +L+P R+++ + + + +++ R+G+ AL++I +GR+GV D+ + GE + G V G +IL KR AT TL ++DR F + R F +SV L K L ++DL +L V AGD + REGER D Y++ RG R+
Sbjct: 164 LKNLEPAQVREIVECMFSQSCDKDEVIIREGESGNALYVIAEGRLGVTKDDE-----FLGEMSGGMVFGELAILYNCKRTATVKANEPTTLWKIDRKMFQMIMMRTGMIRQAEHIAFLKSVPLLKNLPNQDLSKLADVLDVDFYHAGDYIIREGERGDTFYIISRGTARV 328
BLAST of mRNA_E-fasciculatus_F_contig150.3545.1 vs. uniprot
Match: UPI0019B914C3 (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=UPI0019B914C3) HSP 1 Score: 68.6 bits (166), Expect = 4.870e-9 Identity = 46/165 (27.88%), Postives = 78/165 (47.27%), Query Frame = 2
Query: 875 LDLANRREGQILFRQGDKQQALWLILDGRIGVRSIDKRGIVHYAGEFNSGEVIGSIL---PEKRLATATCLGQCTLLQLDRATFLQAL-NDPEAQRAVVK-------KNFFRSVSLFKGLGDRDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRLLK 1336
L L + G++LFRQGD+ AL++I++G + V + G +G + + R AT C+ LL++DR T + L N + RAV++ + R+ LF+ D L + F ++AG ++ G+R D LY+V G +L+
Sbjct: 10 LQLVSLERGELLFRQGDRSDALYVIVEGEVSVVGEGPPRVE--MSRLGPGAFLGEVALMTDQPRSATVVCVASAELLRIDRHTLSRVLANHGDVLRAVLRFVRDRLVDRWMRTSPLFRPFNDAQRIELAAKFKFLEIDAGTIILGTGQRPDGLYIVLAGEFLVLR 172
BLAST of mRNA_E-fasciculatus_F_contig150.3545.1 vs. uniprot
Match: UPI000415C657 (cyclic nucleotide-binding domain-containing protein n=1 Tax=Silanimonas lenta TaxID=265429 RepID=UPI000415C657) HSP 1 Score: 70.9 bits (172), Expect = 9.000e-9 Identity = 55/186 (29.57%), Postives = 90/186 (48.39%), Query Frame = 2
Query: 800 VFDLLGAVPVIGSLDPVFRRKLLWMLDLANRREGQILFRQGDKQQALWLILDGRIGVRSIDKRGIVHYAGEFNSGEVIGS---ILPEKRLATATCLGQCTLLQLDRATFLQALNDPEAQRAVVKKNFFRS-VSLFKG--LGDRDLDRLVSV-FHHTTLEAGDVLCREGERVDYLYLVQRGNLRLLK 1336
V + LG P++G+L + RR+LL + G ++FR+ D + + I++G + V + G G +G G + +R AT C L++ R T L+ ++ EA R + F R+ V + G LG DL+ L+ AG VL REG+ D LYL++RG++ + K
Sbjct: 363 VVEELGRHPIMGALTKLQRRELLLESTVHVLSPGALVFRKNDYSNSFYSIIEGSVQVEVDGEDGAPRVIG-LGAGRFFGEMGLLSGRRRTATVVAATDCVLVETPRRTMLKLISASEALRERIDHAFVRNAVMQYIGPVLGVDDLEDLIETGVQLRRYNAGQVLFREGDPADGLYLIRRGSVAVSK 547
BLAST of mRNA_E-fasciculatus_F_contig150.3545.1 vs. uniprot
Match: Q22UJ2_TETTS (Cyclic nucleotide-binding domain protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q22UJ2_TETTS) HSP 1 Score: 68.9 bits (167), Expect = 4.140e-8 Identity = 48/171 (28.07%), Postives = 78/171 (45.61%), Query Frame = 2
Query: 899 GQILFRQGDKQQALWLILDGRIGVRSIDKRGIVHYAGE--------------------FNSGEVIG--SILPEK-RLATATCLGQCTLLQLDRATFLQALNDPEAQRAVVKKNFFRSVSLFKGLGDRDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRLLKAF 1342
G I+F+QGD+ +LIL G++ V KR + E SGE G +I+ K R AT C+ C + ++ +F++ L D E ++ + N + LFK L L +F + + GDV+ REG+ D LY+++ G ++ K F
Sbjct: 105 GDIVFKQGDQGDKFYLILRGQVKVLVSVKRQLQQNPQEKADKNKKVKNEKEEQLEIKVLKSGETFGELAIIDSKPRGATIVCMEDCDFIVFEKISFIKILKDQETEKLRNEINQLTKIYLFKDFSLNLLKNLYLLFSVNSYQRGDVIYREGDESDKLYIIREGEFKVSKKF 275
BLAST of mRNA_E-fasciculatus_F_contig150.3545.1 vs. uniprot
Match: A0A1G0ENM0_9PROT (Cyclic nucleotide-binding protein n=2 Tax=unclassified Nitrosomonadales TaxID=1660158 RepID=A0A1G0ENM0_9PROT) HSP 1 Score: 63.9 bits (154), Expect = 1.220e-6 Identity = 54/189 (28.57%), Postives = 92/189 (48.68%), Query Frame = 2
Query: 788 NCRCVFDLLGAV----PVIGSLDPVFRRKLLWMLDLANRREGQILFRQGDKQQALWLILDGRIGVRSIDKRGIVHY---AGEFNSGEVIGSILPEKRLATATCLGQCTLLQLDRATFLQALNDPEA-QRAVVKKNFFRSVS--LFKGLGDRDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNL 1324
N R V D + V P++ SL + R+ + + R G+++F + D + + IL+G + V K G + AG+F GE+ G + +R TA C L++ R + L+ LN QR + + + R V L L D +LD LV G+V+ +EG++ D LY+++RG++
Sbjct: 339 NIRSVGDGIALVRRNLPLLESLTTLQLREFMLDSSVLAPRSGEVIFARSDYNNSFYSILEGEVSVHVEGKDGAAVFTMGAGDF-FGEM-GLLSGRRRSGTAIAGENCVLVETPRRSMLKLLNAASGVQRKLDEVSLKRVVLNYLDASLPDSELDYLVQGAKFKQYAFGEVIFKEGDKADGLYMIRRGSV 525
BLAST of mRNA_E-fasciculatus_F_contig150.3545.1 vs. uniprot
Match: A0A532U8S7_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium B3_Chlor TaxID=2012489 RepID=A0A532U8S7_9CHLR) HSP 1 Score: 62.8 bits (151), Expect = 2.580e-6 Identity = 47/180 (26.11%), Postives = 81/180 (45.00%), Query Frame = 2
Query: 812 LGAVPVIGSLDPVFRRKLLWMLDLANRREGQILFRQGDKQQALWLILDGRIGVRSIDKRGIVHYAGEFNSGEVIG--SILP-EKRLATATCLGQCTLLQLDRATFLQALNDPEAQRAVV---KKNFFRSVSLFKGLGDRDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRLL 1333
L +P+ +L R++ ++ + R G ++RQG +L++++ GR+ V D+RG SG+ G S+L ++R LL L++ F L R + K R V LF+ L D+ R+ +V T + G + R+GE LY++ G + LL
Sbjct: 8 LRRIPLFSALSDEDIRQVAGLVKERSHRPGTTVYRQGQLDTSLYMVVSGRLRVWVRDERGREKTLNYLQSGDSFGEHSLLSGDRRDVNIEVEEPALLLSLEKGDFDALLEHSPGLRDALGLHKLARLRKVPLFENLSAEDIQRIATVIGRTRYQQGSTIFRQGELNTTLYIIDSGRVALL 187 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig150.3545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig150.3545.1 >prot_E-fasciculatus_F_contig150.3545.1 ID=prot_E-fasciculatus_F_contig150.3545.1|Name=mRNA_E-fasciculatus_F_contig150.3545.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=801bp MNDIASDTSSVFKPLPSRQSEQQQRQQQSSRPLTSRPQQRPPPEQSRSSRback to top mRNA from alignment at E-fasciculatus_F_contig150:17882..23599- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig150.3545.1 ID=mRNA_E-fasciculatus_F_contig150.3545.1|Name=mRNA_E-fasciculatus_F_contig150.3545.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5718bp|location=Sequence derived from alignment at E-fasciculatus_F_contig150:17882..23599- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig150:17882..23599- >mRNA_E-fasciculatus_F_contig150.3545.1 ID=mRNA_E-fasciculatus_F_contig150.3545.1|Name=mRNA_E-fasciculatus_F_contig150.3545.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4806bp|location=Sequence derived from alignment at E-fasciculatus_F_contig150:17882..23599- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |