mRNA_E-fasciculatus_F_contig150.3544.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig150.3544.1 vs. uniprot
Match: A0A6H5K301_9PHAE (Bromo domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K301_9PHAE) HSP 1 Score: 366 bits (939), Expect = 1.960e-118 Identity = 216/278 (77.70%), Postives = 220/278 (79.14%), Query Frame = 1
Query: 4 LINSLLGSADSEAFREPVDWRGLGLHDYPSLIKRPMDLGTVKLRLERGAYPTAEACAADVRLIWDNCRTYNTGGVPRDLHKASEKLAADALSKRFETRFAKILAGGQLKSSSRGGXXXXXXXXXPAKPKGSSARVA--------AAVAADPTTEDRRRLARHLGRARMEDVTAAVHEIDRGCPEALVLRRAGHQRXXXXXXXXXXXXXXXXXXXXXGCADGVGGVDDTVEVLVGTTAAVEIEVDVDALDAWTFCAVERVVAPLAALRRASRVTATRRA 813
LI+SLLGSADSEAFREPVDWRGLGLHDYP+LIKRPMDLGTVKLRLERGAYPTAEACAADVRLIWDNCRTYNTGGVPRDLHKASEKLAAD LSKRFETR AKILAGG+ KSSSRGGXXXXXXXXX AAVAADPTTEDRRRLARHLGRARMEDVTAAVHEIDRGCPEALV RRAGHQ GC +D VE LVG TAAVEIEVDVDALDAWTFCAVERVVAP ALRRASRVTATRRA
Sbjct: 26 LIDSLLGSADSEAFREPVDWRGLGLHDYPNLIKRPMDLGTVKLRLERGAYPTAEACAADVRLIWDNCRTYNTGGVPRDLHKASEKLAADTLSKRFETRLAKILAGGRPKSSSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVAADPTTEDRRRLARHLGRARMEDVTAAVHEIDRGCPEALVRRRAGHQ-IKREEGEKAAEETEKGRSTGGGCXXXXXXGNDCVEALVGRTAAVEIEVDVDALDAWTFCAVERVVAPHVALRRASRVTATRRA 302
BLAST of mRNA_E-fasciculatus_F_contig150.3544.1 vs. uniprot
Match: A0A7S2EKB9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EKB9_TRICV) HSP 1 Score: 122 bits (305), Expect = 5.130e-29 Identity = 57/103 (55.34%), Postives = 72/103 (69.90%), Query Frame = 1
Query: 1 KLINSLLGSADSEAFREPVDWRGLGLHDYPSLIKRPMDLGTVKLRLERGAYPTAEACAADVRLIWDNCRTYNTGGVPRDLHKASEKLAADALSKRFETRFAKI 309
K++NS+L DS FREPVDWRGL L+DYP +IK+ MDLGTVK +LERG Y TA CA D+RLIW NC+TYN G + L A++ S+RFE R+ K+
Sbjct: 31 KIVNSILARGDSGPFREPVDWRGLELYDYPKIIKKMMDLGTVKRKLERGQYQTAHECAEDIRLIWTNCKTYNADG-------SDFFLLAESFSRRFEERYKKV 126
BLAST of mRNA_E-fasciculatus_F_contig150.3544.1 vs. uniprot
Match: A0A8J2WSU6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WSU6_9STRA) HSP 1 Score: 117 bits (293), Expect = 2.240e-26 Identity = 66/179 (36.87%), Postives = 93/179 (51.96%), Query Frame = 1
Query: 1 KLINSLLGSADSEAFREPVDWRGLGLHDYPSLIKRPMDLGTVKLRLERGAYPTAEACAADVRLIWDNCRTYNTGGVPRDLHKASEKLAADALSKRFETRFAKILAGGQLKSSSRGGXXXXXXXXXPAKPKGSSARVAAAVAADPTTEDRRRLARHLGRARMEDVTAAVHEIDRGCPEAL 537
K+IN+L+ DS FREPVDWRGLGL+DYP +I +PMDL TVK +ER Y + CA D+RLIW+NC+ YN G D + AD SKRFE RF+K+ A + P E++ R + ++ R + E++ V ++D CP+A+
Sbjct: 12 KIINTLMQRPDSVPFREPVDWRGLGLYDYPQVIAKPMDLTTVKQTIERQGYKSVNDCADDIRLIWNNCKKYNQDG--SDFYNL-----ADGFSKRFEERFSKVKAENPALDEEE-------------------------LTHAPDLEEKTRFSHNIYRIKQEELGVLVEKLDAKCPDAI 158
BLAST of mRNA_E-fasciculatus_F_contig150.3544.1 vs. uniprot
Match: A0A7S0BZA1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BZA1_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.670e-26 Identity = 57/101 (56.44%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 1 KLINSLLGSADSEAFREPVDWRGLGLHDYPSLIKRPMDLGTVKLRLERGAYPTAEACAADVRLIWDNCRTYNTGGVPRDLHKASEKLAADALSKRFETRFA 303
KL+NSLL D FREPVDWRGL L DYP +IK+ MDLGTVK +LERG Y T CA D+RL+W NC+TYN G + L A++ SKRFE R A
Sbjct: 50 KLVNSLLARVDCGPFREPVDWRGLELWDYPKVIKKMMDLGTVKRKLERGQYSTPAECAVDIRLVWTNCKTYNADG-------SDFFLLAESFSKRFEDRQA 143
BLAST of mRNA_E-fasciculatus_F_contig150.3544.1 vs. uniprot
Match: A0A7S3PZ05_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZ05_9STRA) HSP 1 Score: 117 bits (292), Expect = 3.850e-26 Identity = 65/187 (34.76%), Postives = 99/187 (52.94%), Query Frame = 1
Query: 1 KLINSLLGSADSEAFREPVDWRGLGLHDYPSLIKRPMDLGTVKLRLERGAYPTAEACAADVRLIWDNCRTYNTGGVPRDLHKASEKLAADALSKRFETRFAKILAGGQLKSSSRGGXXXXXXXXXPAKPKGSSARVAAAVAADPTTEDRRRLARHLGRARMEDVTAAVHEIDRGCPEALVLRRAGHQ 561
KL+ + +SE FR+ VDW LGL+DYP ++KRPMDLG +K ++E+ Y + A DVRL+W NC+TYN G D + AD LS +FE +FAK+L L+++ K + + A +P+ ED++ A+ L + ED+ + E+D CP+A+ A Q
Sbjct: 11 KLVQQIYSKGESEPFRDAVDWESLGLYDYPQIVKRPMDLGQIKRKIEKEEYASVNDAANDVRLVWQNCKTYNADG--SDFYNL-----ADTLSTKFEDKFAKLLKELGLEAADG---------------KSGAGGAGTSEAKEPSLEDKKLFAKRLYKISKEDLGKVIIELDSICPQAITKNSAEDQ 175
BLAST of mRNA_E-fasciculatus_F_contig150.3544.1 vs. uniprot
Match: A0A7S2UQ34_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQ34_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.720e-25 Identity = 72/179 (40.22%), Postives = 100/179 (55.87%), Query Frame = 1
Query: 1 KLINSLLGSADSEAFREPVDWRGLGLHDYPSLIKRPMDLGTVKLRLERGAYPTAEACAADVRLIWDNCRTYNTGGVPRDLHKASEKLAADALSKRFETRFAKILAGGQLKSSSRGGXXXXXXXXXPAKPKGSSARVAAAVAADPTTEDRRRLARHLGRARMEDVTAAVHEIDRGCPEAL 537
K++ + D+E FREPV+W+ LGL DYP +IKRPMDLG +K LE+ Y T AAD++L+W NC TYN G D +K ++KL S FE RFAKI G ++ G XXXXXXX +++PT E++R + L + E++ + E+D CP AL
Sbjct: 12 KVLAQMYAKPDAEPFREPVEWKALGLFDYPQVIKRPMDLGHIKRNLEKNKYSTVHEVAADIKLVWKNCMTYNADG--SDFYKLAKKL-----SNSFEARFAKIAKDGGGDDTANGXXXXXXXX----------------XSSEPTLEEKRTFVKGLYKISKEELGKVITELDTKCPAAL 167
BLAST of mRNA_E-fasciculatus_F_contig150.3544.1 vs. uniprot
Match: A0A836C873_9STRA (Bromodomain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C873_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.850e-25 Identity = 71/179 (39.66%), Postives = 98/179 (54.75%), Query Frame = 1
Query: 1 KLINSLLGSADSEAFREPVDWRGLGLHDYPSLIKRPMDLGTVKLRLERGAYPTAEACAADVRLIWDNCRTYNTGGVPRDLHKASEKLAADALSKRFETRFAKILAGGQLKSSSRGGXXXXXXXXXPAKPKGSSARVAAAVAADPTTEDRRRLARHLGRARMEDVTAAVHEIDRGCPEAL 537
K++++LL ADS+ FREPV+WR + LHDYP +K+PMDLGTV+ L G Y T AADVR +W R YN G LH+ S L K+FE ++ ++ A+P G++ R A PT +D+RRLA L R + ED+TA V ++D CP+AL
Sbjct: 23 KIVSALLVRADSQPFREPVEWRRMRLHDYPDKVKKPMDLGTVRRLLAAGEYRTPAEVAADVRRVWAAARAYNAEGTT--LHELSV-----TLGKKFEEKYERL-----------------PPHLREAEPDGAARREA-----PPTADDKRRLADGLYRVKTEDLTAVVAKLDHRCPDAL 172
BLAST of mRNA_E-fasciculatus_F_contig150.3544.1 vs. uniprot
Match: A0A448YXV5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXV5_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.090e-25 Identity = 68/179 (37.99%), Postives = 99/179 (55.31%), Query Frame = 1
Query: 1 KLINSLLGSADSEAFREPVDWRGLGLHDYPSLIKRPMDLGTVKLRLERGAYPTAEACAADVRLIWDNCRTYNTGGVPRDLHKASEKLAADALSKRFETRFAKILAGGQLKSSSRGGXXXXXXXXXPAKPKGSSARVAAAVAADPTTEDRRRLARHLGRARMEDVTAAVHEIDRGCPEAL 537
K++ S++ +D+E FR PVDW+G+GL DYP+LIK+PMDLGTVK + Y + A D+RL+W NC TYN G D + + A LSKRFE ++AK+ + Q+ + S G G+S+ + V T +++R AR L ED+ + E+D CP AL
Sbjct: 14 KILQSMIQRSDTEPFRVPVDWKGMGLFDYPTLIKKPMDLGTVKRNINSRKYKSIPEAAEDIRLVWTNCMTYNQDG--SDFY-----ILAKNLSKRFEEKYAKLASELQVDARSDSGG-------------GTSSNSSGVV----TLDEKRSFARSLYTLSKEDLGKLIVEVDNKCPAAL 168
BLAST of mRNA_E-fasciculatus_F_contig150.3544.1 vs. uniprot
Match: A0A7S2MY29_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MY29_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.920e-25 Identity = 67/184 (36.41%), Postives = 94/184 (51.09%), Query Frame = 1
Query: 1 KLINSLLGSADSEAFREPVDWRGLGLHDYPSLIKRPMDLGTVKLRLERGAYPTAEACAADVRLIWDNCRTYNTGGVPRDLHKASEKLAADALSKRFETRFAKILAGGQLKSSSRGGXXXXXXXXXPAKPKGSSARVAAAVAADPTTEDRRRLARHLGRARMEDVTAAVHEIDRGCPEALVLRRA 552
KL+ + D+E FR+PVDW+ LGL DYP +IK+PMDLG VK ++E G Y T A DVRLIW NC YN G D + + A +S++FE +F K+L K +GS+ A +PT E++R AR L + ++ + E+D+ CP AL A
Sbjct: 11 KLVAQIYAKGDAEPFRDPVDWKLLGLFDYPQIIKKPMDLGQVKRKIESGKYGTIHDAAEDVRLIWKNCMQYNADG--SDFY-----ILAKNMSRKFEDKFTKLL-----------------------KDQGSAGESKTKNATEPTLEEKRSFARSLYKISKVELGIVITELDKKCPAALTKNSA 164
BLAST of mRNA_E-fasciculatus_F_contig150.3544.1 vs. uniprot
Match: A0A7S2PE54_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PE54_9STRA) HSP 1 Score: 115 bits (287), Expect = 4.870e-25 Identity = 75/189 (39.68%), Postives = 102/189 (53.97%), Query Frame = 1
Query: 1 KLINSLLGSADSEAFREPVDWRGLGLHDYPSLIKRPMDLGTVKLRLERGAYPTAEACAADVRLIWDNCRTYNTGGVPRDLHKASEKLAADALSKRFETRFAKILA----GGQL------KSSSRGGXXXXXXXXXPAKPKGSSARVAAAVAADPTTEDRRRLARHLGRARMEDVTAAVHEIDRGCPEAL 537
KL++S++ +D+ FREPV+WR L L DYP +IKRPMDLGTVK +LE Y TA CA D+RLIW NC TYN G D + L A ALS++FE RF K+ A GG KS +GG GS+A PT E++ + A ++ + + + + ID CP+A+
Sbjct: 19 KLVSSMMTKSDTAPFREPVNWRELELWDYPKIIKRPMDLGTVKRKLESTQYETANECAEDIRLIWSNCMTYNQEG--SDFY-----LLAQALSRKFEDRFRKVRAEYDVGGDAYDNTKSKSDGKGGSAENG--------SGSAAGGKMGDHKPPTLEEKTQFAGNIFKIGGDALGYVMQVIDLRCPQAI 192 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig150.3544.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig150.3544.1 >prot_E-fasciculatus_F_contig150.3544.1 ID=prot_E-fasciculatus_F_contig150.3544.1|Name=mRNA_E-fasciculatus_F_contig150.3544.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=296bp MDLGTVKLRLERGAYPTAEACAADVRLIWDNCRTYNTGGVPRDLHKASEKback to top mRNA from alignment at E-fasciculatus_F_contig150:15335..17438+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig150.3544.1 ID=mRNA_E-fasciculatus_F_contig150.3544.1|Name=mRNA_E-fasciculatus_F_contig150.3544.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2104bp|location=Sequence derived from alignment at E-fasciculatus_F_contig150:15335..17438+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig150:15335..17438+ >mRNA_E-fasciculatus_F_contig150.3544.1 ID=mRNA_E-fasciculatus_F_contig150.3544.1|Name=mRNA_E-fasciculatus_F_contig150.3544.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1776bp|location=Sequence derived from alignment at E-fasciculatus_F_contig150:15335..17438+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |