mRNA_E-fasciculatus_F_contig150.3542.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig150.3542.1
Unique NamemRNA_E-fasciculatus_F_contig150.3542.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig150.3542.1 vs. uniprot
Match: D8LBQ4_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBQ4_ECTSI)

HSP 1 Score: 673 bits (1737), Expect = 6.210e-237
Identity = 364/398 (91.46%), Postives = 375/398 (94.22%), Query Frame = 2 
Query:   26 REIGELKRELERQKREADEAKKALEDKIAQEMVLKGELDADEAKGRSRHMDEWNVEDVVEWFQSIGHNQYDKSIREHQVDGLLLLHLMNEDWGHLGIHSPLTVRRIDVAMQEYRIRFERKQAGDVDDEEDASDASGSDTPSELLDDDXXXXXXXXXXXXXXXXAAVDDQDYLNEDELAELQRDEENIKKEIIFEGEEKRGRPDIGDIVRIHYTCALQESGGNGSGRSSRRSGGSRAVSGEGSSEHDGGGDAGVIESSRKNRRRPLEFVVGAGQVVKGIDRSIRQMLHGERARVFVTALYGYGDKGHPPTIPPRAALVFDVNLLDFWPRPRWQKPLVQVLSEPYRETPYAPRMQSPAGGGGTAGAGGVATSPADGSTGVGGGPTVDGLSDYPYGKVGRY 1219
            REIGELK+ELERQKREADEA+KALEDKIAQEMVLKGELDADEAKGRSRHMDEWNVEDVVEWFQSIGHNQYDKSIREHQVDGLLLLHLMNEDWGHLGIHSPLTVRRIDVAMQEYRIRFERKQAGDVDDEEDASD SGSDTPSELLDDD  XXXXXX    XXXX AVDDQDYLNEDELAELQRDEENIKKEIIFEGEEKRGRPDIGD+VRIHYTCALQESGG+GSGRSSRRSGGS AVSG GSS +DGGGDAGV+ESSRK+RRRPLEFVVGAGQVVKGIDRSIRQMLHGERARVFVTALYGYGDKGHPPTIPPRAALVFDVNLLDFWPRPRWQKPLVQVLSEPY+ETPYAPR++ P GG GTAGAGGV T  A GSTGV GGPT   + DYPYGKVGRY
Sbjct:  193 REIGELKKELERQKREADEARKALEDKIAQEMVLKGELDADEAKGRSRHMDEWNVEDVVEWFQSIGHNQYDKSIREHQVDGLLLLHLMNEDWGHLGIHSPLTVRRIDVAMQEYRIRFERKQAGDVDDEEDASDVSGSDTPSELLDDDDIXXXXXXGQENXXXXVAVDDQDYLNEDELAELQRDEENIKKEIIFEGEEKRGRPDIGDVVRIHYTCALQESGGSGSGRSSRRSGGSHAVSGYGSSGNDGGGDAGVVESSRKHRRRPLEFVVGAGQVVKGIDRSIRQMLHGERARVFVTALYGYGDKGHPPTIPPRAALVFDVNLLDFWPRPRWQKPLVQVLSEPYKETPYAPRLRPPTGGDGTAGAGGVGT--AHGSTGVDGGPTKQPV-DYPYGKVGRY 587
[Close]
BLAST of mRNA_E-fasciculatus_F_contig150.3542.1 vs. uniprot
Match: A0A836CB63_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB63_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.490e-47
Identity = 125/336 (37.20%), Postives = 162/336 (48.21%), Query Frame = 2 
Query:  119 MVLKGELDADEAKGRSRHMDEWNVEDVVEWFQSIGHNQYDKSIREHQVDGLLLLHLMNEDWGHLGIHSPLTVRRIDVAMQEYRIRFERKQAGDVDDE--------------EDASDASGSDTPSELLDDDXXXXXXXXXXXXXXXX-----AAVDDQDYLNEDELAELQRDEENIKKEIIFEGEEKRGRPDIGDIVRIHYTCALQESGGNGSGRSSRRSGGSRAVSGEGSSEHDGGGDAGVIESSRKNRRRPLEFVVGAGQVVKGIDRSIRQMLHGERARVFVTALYGYGDKGHPPTIPPRAALVFDVNLLDFWPRPRWQKPLVQVLSEPYRETPY 1069
            +V  G  DAD+A+GR RHMDEW                                             +P     + V M++YR+RFERKQ G                   +  SDAS SDTPSELL                        A ++ +  L++ ELAELQRD  NI+KE++F G+    RP+ GD+V  HYTC L++ G                                V+ES+RK RR   EFV+GAG V++G+DR + +M  GERAR+ V+A Y YG++G PP IPP AALVFDVNL+ FWPRPRW+KPL+Q    PY ETPY
Sbjct:  195 LVRAGAADADDARGRPRHMDEW---------------------------------------------AP-----VQVGMRKYRLRFERKQRGXXXXXXXXXXXXXXXXXXXDSLSDASASDTPSELLQGTSEGGREYLDEESEGEANRAQAALLEGEAALSDAELAELQRDAANIEKEVMFAGDAD-DRPEDGDVV--HYTCTLRDGGA-------------------------------VVESTRKTRRCAFEFVLGAGAVIRGLDRGVARMAFGERARITVSAEYAYGERGFPPIIPPGAALVFDVNLIRFWPRPRWRKPLIQATG-PYTETPY 445
[Close]
BLAST of mRNA_E-fasciculatus_F_contig150.3542.1 vs. uniprot
Match: A0A7S1TPB3_9STRA (Peptidylprolyl isomerase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPB3_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.240e-44
Identity = 127/354 (35.88%), Postives = 190/354 (53.67%), Query Frame = 2 
Query:   29 EIGELKRELERQKREADEAK-KALEDKIAQEMVLKGELDADEAKGRSRHMDEWNVEDVVEWF-QSIGHNQYDKSIREHQVDGLLLLHLMNEDWGHLGIHSPLTVRRIDVAMQEYRIRFERKQAGDVDDEEDA-SDASGSDTPSELLDDDXXXXXXXXXXXXXXXXAAVDDQDY-LNEDELAELQRDEENIKKEIIFEGEEKRGRPDIGDIVRIH---YTCALQESGGNGSGRSSRRSGGSRAVSGEGSSEHDGGGDAGVIESSRKNRRRPLEFVVGAGQVVKGIDRSIRQMLHGERARVFVTALYGYGDKGHPPTIPPRAALVFDVNLLDFWPRPRWQKPLVQ---VLSEPYRE 1060
            E+  LKRELE ++R   E K K   D   +E+V + +++  + + RS+HMD+W  ++V  W  + +    Y + I +++VDG+L+L+L  E+   +GI S L++RRI+V M++YRIRFER   G  DD++D  SD S SDTPSELLD++                   D  D  + EDEL E++RDE+ I KE+  +G+ +   P  GDIVRIH   Y    ++                                   IE +++ R+RPLE V+G  Q+ +G++RSI  M  GERA   + A YGY DK  PP +P    + +D+ L+ F  RP W KPL+Q   +  +PY E
Sbjct:  199 EVATLKRELEEERRRFAEFKAKRFND--VRELVKQSDIEDAKGRLRSKHMDDWTFQEVSAWLDEDLNCGHYCELIIQNRVDGVLMLNLNEEELIDMGITSKLSLRRIEVGMRKYRIRFER---GIRDDDDDGLSDMSVSDTPSELLDEEDGQYAESEESDGDGSVQDYDLADLPITEDELVEMRRDEQFIDKELKHKGDGEH-MPQAGDIVRIHMRVYDSKKKQ-----------------------------------IEDTKRWRKRPLEVVLGTSQLTRGVERSILTMTKGERAVFTIQAEYGYKDKEFPPFLPVGEVVTYDIQLVSFRTRPTWIKPLIQKPGLTEKPYYE 511
[Close]
BLAST of mRNA_E-fasciculatus_F_contig150.3542.1 vs. uniprot
Match: A0A7S3US58_HETAK (Peptidylprolyl isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3US58_HETAK)

HSP 1 Score: 139 bits (350), Expect = 6.710e-34
Identity = 102/309 (33.01%), Postives = 149/309 (48.22%), Query Frame = 2 
Query:  173 MDEWNVEDVVEWFQSIGHNQYDKSIREHQVDGLLLLHLMNEDWGHLGIHSPLTVRRIDVAM--------QEYRIRFERKQAGDVDDEEDASDASGSDTPSELLDDDXXXXXXXXXXXXXXXXAAVDDQDYLNEDELAELQRDEENIKKEIIFEGEEKRGRPDIGDIVRIHYTCALQESGGNGSGRSSRRSGGSRAVSGEGSSEHDGGGDAGVIESSRKNRRRPLEFVVGAGQVVKGIDRSIRQMLHGERARVFVTALYGYGDKGHPPTIPPRAALVFDVNLLDFWPRPRWQKPLVQVLSEPYRETPYAP 1075
            M+ W+V     WF+SI   +Y ++I +++V+GLLL  +   DW  LGI + L +RRI + +        QE  +R E+  A     EE A  A  +   + LL +                   VDD   L  ++LA    D+ NI KE+I  G+ +   P IGD+VR+ +  +L                                 D   I+S++  R+RP EFV+G GQV+KG +R++  M  GER++  ++A Y YG++G  P IPP + LVFD  LL FW RP W KPL+Q       E PY P
Sbjct:    1 MELWDVPATAAWFRSIDFPEYAENIFKYKVNGLLLGEMKGRDWSDLGIQNRLHLRRIQLEIERHKAECEQEEELRLEKIAAA----EEAAFQARVAHERALLLQE-------------------VDDPSELTPEDLA----DKLNIFKEMIHHGDNENF-PYIGDVVRLDFEVSLL--------------------------------DGTKIDSTKHKRKRPFEFVIGEGQVIKGFERAVAGMSLGERSKFTISAEYAYGEEGMIPNIPPGSKLVFDATLLAFWARPLWLKPLIQQPG--LSEKPYEP 247
[Close]
BLAST of mRNA_E-fasciculatus_F_contig150.3542.1 vs. uniprot
Match: A0A7S3HGK8_9STRA (Peptidylprolyl isomerase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGK8_9STRA)

HSP 1 Score: 137 bits (346), Expect = 3.060e-31
Identity = 104/351 (29.63%), Postives = 177/351 (50.43%), Query Frame = 2 
Query:   32 IGELKRELERQKREADEAKKALEDKIAQEMVLKGELDADEAKGRSRHMDEWNVEDVVEWFQSIGHNQYDKSIREHQVDGLLLLHLMNEDWGHLGIHSPLTVRRIDVAMQEYRIRFER-KQAGDVDDEEDA-SDASGSDTPSELLDDDXXXXXXXXXXXXXXXXAAVDDQDYLNEDELAELQR--DEENIKKEIIFEGEEKRGRPDIGDIVRIHYTCALQESGGNGSGRSSRRSGGSRAVSGEGSSEHDGGGDAGVIESSRKNRRRP-LEFVVGAGQVVKGIDRSIRQMLHGERARVFVTALYGYGDKGHPPTIPPRAALVFDVNLLDFWPRPRWQKPLVQVLSEPYRETPY 1069
            I EL  +LE + +E  + +K   +++  E++     +A   K RSR+MDEW  +++  WF  +  ++Y   + +++VDGLL ++L  ++W  +GI +   +R++ + ++ YR+R++R K    VD+++D  S+ S S+    L  +D                 A +D+ +L   E  +LQ+  D +NI   +   G+     P +GDIVR+ Y  +L E                               +  ++ S++    RP +EFV+G  QV+KG DR++  M  GER+ + +++ Y YG +G  P IPP +AL FD+ LL F  R  W KPL+Q  S    E PY
Sbjct:  161 IRELMAQLEAKDQEIKDIRKKRFEELEPEVIRDKVKNAKSFK-RSRNMDEWKTDELAAWFTELKMDEYVPFLFQNRVDGLLFINLSEDEWPDMGIVNRFHIRKLQLILKSYRVRYQRRKDKIQVDEDDDLLSEISPSELSGMLAAEDNMDDDYSSDDSSETESYASEDELHLGLTEEQKLQKQLDAKNITVNLAVRGD-GINFPLVGDIVRVRYVASLVE-------------------------------NQKIVMSTKNVLGRPWVEFVLGIDQVIKGFDRALPLMSVGERSTIIMSSEYAYGKEGLAPHIPPNSALSFDLTLLGFRARSPWVKPLIQDYST--HEKPY 476
[Close]
BLAST of mRNA_E-fasciculatus_F_contig150.3542.1 vs. uniprot
Match: A0A0V0QJW8_PSEPJ (Peptidylprolyl isomerase n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QJW8_PSEPJ)

HSP 1 Score: 77.8 bits (190), Expect = 9.230e-14
Identity = 34/69 (49.28%), Postives = 47/69 (68.12%), Query Frame = 2 
Query:  794 SRKNRRRPLEFVVGAGQVVKGIDRSIRQMLHGERARVFVTALYGYGDKGHPPTIPPRAALVFDVNLLDF 1000
            S ++R +P +F +GAGQV+KG D  + QM  GERA +     + YG++G+P  IPP+A LVFDV LL F
Sbjct:   40 SSRDRNQPFQFTLGAGQVIKGWDEGVAQMSQGERATITCPYTHAYGEQGYPGVIPPKATLVFDVELLSF 108
[Close]
BLAST of mRNA_E-fasciculatus_F_contig150.3542.1 vs. uniprot
Match: A0A3M6VB60_9STRA (Peptidylprolyl isomerase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VB60_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.590e-13
Identity = 31/69 (44.93%), Postives = 48/69 (69.57%), Query Frame = 2 
Query:  794 SRKNRRRPLEFVVGAGQVVKGIDRSIRQMLHGERARVFVTALYGYGDKGHPPTIPPRAALVFDVNLLDF 1000
            S +NR  P +F +GAG+V++G D  +  M  G+ A++ ++  Y YG++GHPP IPP+A L+F+V LL F
Sbjct:   37 SNQNREHPFQFKLGAGEVIRGWDEGVAMMSKGQIAKLTLSHEYAYGERGHPPVIPPKATLIFEVELLSF 105
[Close]
BLAST of mRNA_E-fasciculatus_F_contig150.3542.1 vs. uniprot
Match: B8BR35_THAPS (Peptidylprolyl isomerase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BR35_THAPS)

HSP 1 Score: 83.6 bits (205), Expect = 2.280e-13
Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = 2 
Query:  773 DAGVIESSRKNRRRPLEFVVGAGQVVKGIDRSIRQMLHGERARVFVTALYGYGDKGHPPTIPPRAALVFDVNLLDF 1000
            D    +SSR +R +P +F +G GQV+KG D     M  GE AR+ + + YGYGD+GHPPTIP +A L+FDV LL F
Sbjct:   47 DGSKFDSSR-DRGKPFKFTIGTGQVIKGWDEGFASMKVGEVARLVIKSEYGYGDRGHPPTIPAKATLIFDVELLGF 121
[Close]
BLAST of mRNA_E-fasciculatus_F_contig150.3542.1 vs. uniprot
Match: A0A5A8E9C9_CAFRO (Peptidylprolyl isomerase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E9C9_CAFRO)

HSP 1 Score: 77.4 bits (189), Expect = 2.860e-13
Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = 2 
Query:  785 IESSRKNRRRPLEFVVGAGQVVKGIDRSIRQMLHGERARVFVTALYGYGDKGHPPTIPPRAALVFDVNLLDF 1000
            I+SSR +R+ PLEF VG GQV+ G+D ++++M  G+RA++ + A   YG +G+PP IPP AALV DV L+ F
Sbjct:   69 IDSSR-DRKVPLEFRVGLGQVIPGLDVAMKRMSRGQRAKLTIPAAMAYGARGYPPIIPPGAALVMDVELISF 139
[Close]
BLAST of mRNA_E-fasciculatus_F_contig150.3542.1 vs. uniprot
Match: H3G8A5_PHYRM (Peptidylprolyl isomerase n=13 Tax=Peronosporaceae TaxID=4777 RepID=H3G8A5_PHYRM)

HSP 1 Score: 76.3 bits (186), Expect = 3.120e-13
Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 2 
Query:  773 DAGVIESSRKNRRRPLEFVVGAGQVVKGIDRSIRQMLHGERARVFVTALYGYGDKGHPPTIPPRAALVFDVNLLDF 1000
            D    +SSR +R RP +F +GAGQV++G D  + +M  G+ A++ +   Y YG++G+PP IPPRA L+F+V LL F
Sbjct:   33 DGSKFDSSR-DRGRPFQFELGAGQVIRGWDEGVAKMSKGQVAKLTLPHDYAYGERGYPPVIPPRATLIFEVELLSF 107
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig150.3542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBQ4_ECTSI6.210e-23791.46Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A836CB63_9STRA1.490e-4737.20Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A7S1TPB3_9STRA1.240e-4435.88Peptidylprolyl isomerase n=1 Tax=Phaeomonas parva ... [more]
A0A7S3US58_HETAK6.710e-3433.01Peptidylprolyl isomerase n=1 Tax=Heterosigma akash... [more]
A0A7S3HGK8_9STRA3.060e-3129.63Peptidylprolyl isomerase n=2 Tax=Spumella elongata... [more]
A0A0V0QJW8_PSEPJ9.230e-1449.28Peptidylprolyl isomerase n=1 Tax=Pseudocohnilembus... [more]
A0A3M6VB60_9STRA1.590e-1344.93Peptidylprolyl isomerase n=1 Tax=Peronospora effus... [more]
B8BR35_THAPS2.280e-1351.32Peptidylprolyl isomerase n=1 Tax=Thalassiosira pse... [more]
A0A5A8E9C9_CAFRO2.860e-1351.39Peptidylprolyl isomerase n=2 Tax=Cafeteria roenber... [more]
H3G8A5_PHYRM3.120e-1346.05Peptidylprolyl isomerase n=13 Tax=Peronosporaceae ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig150contigE-fasciculatus_F_contig150:310..4487 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score632.9
Seed ortholog evalue9.5e-179
Seed eggNOG ortholog2880.D8LBQ4
KEGG koko:K09572
EggNOG free text desc.FK506 binding
EggNOG OGsCOG0545@1,KOG0543@2759
Ec32 ortholog descriptionFKBP domain protein
Ec32 orthologEc-27_003120.1
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03110
Hectar predicted targeting categoryother localisation
Exons6
Model size1664
Cds size1104
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig150.3542.1prot_E-fasciculatus_F_contig150.3542.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig150 428..4045 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927980.098869-UTR-E-fasciculatus_F_contig150:309..4271622927980.098869-UTR-E-fasciculatus_F_contig150:309..427Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig150 310..427 +
1695995776.2478378-UTR-E-fasciculatus_F_contig150:309..4271695995776.2478378-UTR-E-fasciculatus_F_contig150:309..427Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig150 310..427 +
1622927980.2204678-UTR-E-fasciculatus_F_contig150:4045..44871622927980.2204678-UTR-E-fasciculatus_F_contig150:4045..4487Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig150 4046..4487 +
1695995776.3218741-UTR-E-fasciculatus_F_contig150:4045..44871695995776.3218741-UTR-E-fasciculatus_F_contig150:4045..4487Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig150 4046..4487 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927980.1150613-CDS-E-fasciculatus_F_contig150:427..4601622927980.1150613-CDS-E-fasciculatus_F_contig150:427..460Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig150 428..460 +
1695995776.2613044-CDS-E-fasciculatus_F_contig150:427..4601695995776.2613044-CDS-E-fasciculatus_F_contig150:427..460Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig150 428..460 +
1622927980.1309755-CDS-E-fasciculatus_F_contig150:913..10211622927980.1309755-CDS-E-fasciculatus_F_contig150:913..1021Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig150 914..1021 +
1695995776.2719553-CDS-E-fasciculatus_F_contig150:913..10211695995776.2719553-CDS-E-fasciculatus_F_contig150:913..1021Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig150 914..1021 +
1622927980.1450408-CDS-E-fasciculatus_F_contig150:1574..17031622927980.1450408-CDS-E-fasciculatus_F_contig150:1574..1703Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig150 1575..1703 +
1695995776.2824469-CDS-E-fasciculatus_F_contig150:1574..17031695995776.2824469-CDS-E-fasciculatus_F_contig150:1574..1703Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig150 1575..1703 +
1622927980.1556349-CDS-E-fasciculatus_F_contig150:2236..23351622927980.1556349-CDS-E-fasciculatus_F_contig150:2236..2335Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig150 2237..2335 +
1695995776.2925253-CDS-E-fasciculatus_F_contig150:2236..23351695995776.2925253-CDS-E-fasciculatus_F_contig150:2236..2335Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig150 2237..2335 +
1622927980.165964-CDS-E-fasciculatus_F_contig150:2734..28421622927980.165964-CDS-E-fasciculatus_F_contig150:2734..2842Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig150 2735..2842 +
1695995776.3008664-CDS-E-fasciculatus_F_contig150:2734..28421695995776.3008664-CDS-E-fasciculatus_F_contig150:2734..2842Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig150 2735..2842 +
1622927980.2060552-CDS-E-fasciculatus_F_contig150:3418..40451622927980.2060552-CDS-E-fasciculatus_F_contig150:3418..4045Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig150 3419..4045 +
1695995776.3113458-CDS-E-fasciculatus_F_contig150:3418..40451695995776.3113458-CDS-E-fasciculatus_F_contig150:3418..4045Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig150 3419..4045 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig150.3542.1

>prot_E-fasciculatus_F_contig150.3542.1 ID=prot_E-fasciculatus_F_contig150.3542.1|Name=mRNA_E-fasciculatus_F_contig150.3542.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=368bp
MVLKGELDADEAKGRSRHMDEWNVEDVVEWFQSIGHNQYDKSIREHQVDG
LLLLHLMNEDWGHLGIHSPLTVRRIDVAMQEYRIRFERKQAGDVDDEEDA
SDASGSDTPSELLDDDDVYDDDDSGQENDEDEAAVDDQDYLNEDELAELQ
RDEENIKKEIIFEGEEKRGRPDIGDIVRIHYTCALQESGGNGSGRSSRRS
GGSRAVSGEGSSEHDGGGDAGVIESSRKNRRRPLEFVVGAGQVVKGIDRS
IRQMLHGERARVFVTALYGYGDKGHPPTIPPRAALVFDVNLLDFWPRPRW
QKPLVQVLSEPYRETPYAPRMQSPAGGGGTAGAGGVATSPADGSTGVGGG
PTVDGLSDYPYGKVGRY*
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mRNA from alignment at E-fasciculatus_F_contig150:310..4487+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig150.3542.1 ID=mRNA_E-fasciculatus_F_contig150.3542.1|Name=mRNA_E-fasciculatus_F_contig150.3542.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4178bp|location=Sequence derived from alignment at E-fasciculatus_F_contig150:310..4487+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGTAAAATATGAGTTTCGTCGACGCAGAGAGATTGGAGAGCTGAAGAGGG
AGCTGGAGAGACAAAAGCGAGAGGCAGACGAGGCGAAGAAAGCGCTGGAA
GATAAGATAGCCCAAGAGATGGTGCTGAAAGGAGAGCTAGACGCCGACGA
GGTCAGTTCAGTATTGGGCTCTGGTAAAACAACAGCATCACCAACGGAAT
CACACACACCGATAAGCGATTGTGAGGCTTTGGTGAACACCTGCGAATCG
AGTTGGAAAGCTTAATTATTTTCACGCATCAAAGTGTTTGGTCGTCAGGG
ATTATTTTGGCGTGTTTGACGGGACTCGTCCTCCCAGGTTGTAGTTAAGG
CAGTCATGCACACCTTCCATGGTGTCAGCCAACCCCAGCGCAATGCCATC
CACCTCGTTGTTGTGCAAGCGTCTTCACTCAAGTGTTGATCACCTCCTCG
GCGCCGCCTTACTGTTCATTCCTGAAGCGCATGTCATTGGCTAACCAACA
AACCGACTCACTTATTCATCTGTGTATCATCCCCCTTCGCTCGGTCATCC
ATTTGCCTCGCTTCCCGTGTACCCCTCGTCCCTCCCACCCTGCCTCCGTA
CTAGGCGAAAGGGCGGAGCAGGCATATGGATGAGTGGAACGTGGAAGATG
TGGTGGAATGGTTTCAAAGCATCGGTCACAACCAGTACGACAAAAGCATC
AGAGAACACCAGGTGGGGTGCATCAGAGAGCTCGGGAGTGATGTTGCCGT
GTGACACGCGAAGCGAAAGAAAGAAACACTTCAGGTTGAGACCGGTCGGT
GCATCCCCTGATACCGCATGAATAAGCACTCTTGCAAATGAAGACTGCGC
CAATGTGCCAATGTTGTGAATTGAGTGACTCGGGCAATTGTTGTCGTTGC
TGAGTCACTCGGGCAATTGTTGTCGTTGCTGAGTCCATGTCAACGGAATT
GGCAGGAATAACGTGTCCGGCACACACGTTTCTGATATGTCTTTCCCAAA
AGGCTGTTTGTACGACGTTTGTTGCGAAACAACCTGGACATAATGACGGG
CGTGCATTTTTCGGTTGACCGTTTCAGTAACGCGGTCAAAGGCTGAACCG
GTCGATAGCTGCTAGAACAATCATCCTCACAGCGACCGACGCGACTGTTC
TAAATTACGTGCGTACATCGAACCCCCCCACCCCGCGCCCAGACCGTAAA
CGGTACGTGGTTGTCAGCAATATTTCCGTGAAGGATAACTATTTAATCGG
TTTCTTCTCTCGCAGGTCGACGGGCTGCTCCTGCTCCACCTCATGAACGA
GGACTGGGGACACCTGGGTATCCACAGCCCGCTTACCGTCCGCCGCATAG
ATGTAGCGATGCAGGAGTACCGGATACGCTTCGAACGGAAGCAGGTCAGG
CGCGTTTCATACGAAACAATATCCCTAGACTTCATGCCGTTCGTTGTCGA
TCTGGCGTTTTGACTGTAGAAGGAGCAATACTGTTTCGTGTTGTGGCAAA
GTCACAGAACGCCATGACAAAGAACGTCACAATCGAAACACAAACATCCA
GTGACTACAACAGTGCTGTGGATGTGGTCTCCCCCGGTTTCTCCAGGTTG
TTCCTTTCCGTGAAGTCAAAAGGTGGCACAACGTCTTGTAAAAAATGTTC
TCATACACGGTACCTTCCACGAAATGCCTGAAAAAAGAGACCATGCCATC
TCTGTTGATCGTTTCATTCTCCCTCGGGTCTTGATTCGACCGGTACTACC
TCTGTTGCTTCACCTGCTGTGGCTGAAACTCTCGTCGCTGCTGCTATCGC
TGCTGCCGGTTCCTTCTTTTTGCTGTCATACTCTTTGTTTTCTGAAATTA
TCTAGTGTTGTTCCGTTCGTCGGCACCGGCCCTTATACGTTATTGACCCC
GTTCTTCTCTATTGGCATACTATCCAGGCTGGGGATGTCGATGATGAAGA
GGATGCGTCGGACGCTAGCGGCTCCGACACGCCCTCCGAACTCCTGGACG
ATGACGACGTCTATGACGACGACGACGTGAGATAGAAGACTATCAGTACG
CGTTGAACACGAGCAGGGGGAGTTCTTATGCAAAATAGATACATGCGTGC
ACCGGTAGCGTGAAAATTACACGCGGTGGCAAATTTGCTTCGAATGCTTG
AAACGGCGCCACTATTTGAGGGAAGAACGAGACCATGTAAAGGCCGCTAA
GTTCATGCTTTCCTCATTGTTCCATTTGGCCACGAAAAGATAAGAGAGGA
CATACCAACCTTGTTGCCAGCCGTTTTCTCACTACTTCTTCGAACTCCAA
ATCAGAAAATGAGACATGTCGTGTACTTTCAGATCAGTTGAAGTCCTGGT
TTCCGAGTATTCCCCCCCGTAAACTGTGTGTCTACACGTCGTCGACTATG
TCTTGCTATGGGCTTCCCCACTCAGTCCGGACAAGAAAACGACGAAGATG
AAGCGGCCGTAGATGACCAAGACTATCTTAACGAGGATGAGCTCGCAGAG
CTTCAACGAGATGAGGAGAACATAAAAAAAGAGGTACGTAACAAGCGGCA
CGTCGCGTCCTGCTTAGCAGATCCACAAAAGCCGGCTGCATTTCCCCGCC
TCCTTTAACACTGCTACGCAGGCTCCTTATGGAGCCATACCTCCACCGCG
AAACACTGGCCCGCCTATTGTACCGCTTGCCGGCTTTTTCTATTGACTGT
TTCGTATGTTTCCGAACGAAAAACAAAGGCTTGGAATGTATAGAAGTGAA
GAAATCTCCAAGAGAGCACGAAACGATACACCACCAAAGAACGAGCTGTG
CCGCACCACTAATCGTGCAATTTACCCTCTACGCTGCTGCCAATGTGGGT
AGGTACGGCACAAAAGGACAAGGTTTTAGATGTAAACATGCATGAACGAC
ACCAAACTATCGGCACATGTCTATTTTTTCTCGAATTGCCGAAACAGGTA
CGCACGGCTATAATAGTGGTCAAGTTGTACGTAGCACCTGGCGGCTGTTC
GCAGTACCGTGGCCTACCCGGCCTCTCCGTTCGCCTCTGCCTTGACCCCT
GATTGCCGTGACGCCCATGATTTGTCGACAACTTCTTCATCCGTGACCAC
AAACACAAGATCATATTTGAGGGAGAAGAGAAGCGCGGGCGGCCAGATAT
TGGCGACATCGTCCGCATTCACTACACTTGCGCGCTGCAGGAAAGCGGCG
GTAACGGCAGTGGCAGAAGCAGTAGAAGAAGCGGAGGCTCCCGCGCAGTG
AGTGGTGAGGGCAGCAGCGAGCACGACGGCGGTGGTGACGCCGGTGTTAT
AGAAAGCTCCCGTAAGAACAGGCGACGACCGCTTGAGTTCGTCGTCGGGG
CGGGGCAGGTGGTCAAGGGGATTGACCGATCGATCCGGCAGATGCTGCAC
GGGGAGCGGGCGAGGGTTTTCGTCACGGCTCTGTACGGCTACGGAGACAA
GGGGCATCCGCCGACGATCCCGCCACGGGCAGCCCTCGTGTTCGACGTGA
ACTTGCTGGACTTCTGGCCCCGGCCGAGGTGGCAGAAGCCGCTTGTGCAG
GTGCTGTCCGAGCCCTACAGGGAAACGCCGTACGCTCCGCGAATGCAGTC
GCCGGCAGGGGGGGGTGGTACTGCAGGTGCCGGAGGGGTGGCCACTTCAC
CCGCAGATGGTAGCACCGGTGTCGGTGGTGGCCCCACCGTGGATGGGTTG
TCAGACTATCCTTACGGCAAAGTTGGGAGATACTAGGCACCGTGTTCCGC
GACGTGAGTTTGTAGGATTGGCGGCCCGTGAAAGTTTAGTAACGGCGGCG
TTGACTGCCGTGCCGTCCTGCGTACATGTAGGTTCGTGAAAGACCCCCCC
TCTTCCCTTTCCCCCCCGTGTTTCCTGTATACGTTTGAAAAACCTAGAAG
TGCTCGTACTCTGATTTCCGACGCAATTAGTGAGACTAATGCCCTGAATC
GTCGACAGGTGCAACTTGTACACGATGACGGCATATTTTCGTGATCACCA
TCTCAGGCATGCGTAGGTCGTCAAAATCTGACACCATGCAGTATGCAGTG
GTGTTCGTTCCACTTCCAACTATATGTTCTAGCGGTCACAAGTGCCTGGG
CGCCGTGATACATTTGCTGAGGTTGCGTTCTCCGTCAGACGTGTCGGGCT
GTTTGGTGATCTGCTTCGTTGACGGTCC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig150:310..4487+

>mRNA_E-fasciculatus_F_contig150.3542.1 ID=mRNA_E-fasciculatus_F_contig150.3542.1|Name=mRNA_E-fasciculatus_F_contig150.3542.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2208bp|location=Sequence derived from alignment at E-fasciculatus_F_contig150:310..4487+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGTGCTGAAAGGAGAGCTAGACGCCGACGAGATGGTGCTGAAAGGAGA
GCTAGACGCCGACGAGGCGAAAGGGCGGAGCAGGCATATGGATGAGTGGA
ACGTGGAAGATGTGGTGGAATGGTTTCAAAGCATCGGTCACAACCAGTAC
GACAAAAGCATCAGAGAACACCAGGCGAAAGGGCGGAGCAGGCATATGGA
TGAGTGGAACGTGGAAGATGTGGTGGAATGGTTTCAAAGCATCGGTCACA
ACCAGTACGACAAAAGCATCAGAGAACACCAGGTCGACGGGCTGCTCCTG
CTCCACCTCATGAACGAGGACTGGGGACACCTGGGTATCCACAGCCCGCT
TACCGTCCGCCGCATAGATGTAGCGATGCAGGAGTACCGGATACGCTTCG
AACGGAAGCAGGTCGACGGGCTGCTCCTGCTCCACCTCATGAACGAGGAC
TGGGGACACCTGGGTATCCACAGCCCGCTTACCGTCCGCCGCATAGATGT
AGCGATGCAGGAGTACCGGATACGCTTCGAACGGAAGCAGGCTGGGGATG
TCGATGATGAAGAGGATGCGTCGGACGCTAGCGGCTCCGACACGCCCTCC
GAACTCCTGGACGATGACGACGTCTATGACGACGACGACGCTGGGGATGT
CGATGATGAAGAGGATGCGTCGGACGCTAGCGGCTCCGACACGCCCTCCG
AACTCCTGGACGATGACGACGTCTATGACGACGACGACTCCGGACAAGAA
AACGACGAAGATGAAGCGGCCGTAGATGACCAAGACTATCTTAACGAGGA
TGAGCTCGCAGAGCTTCAACGAGATGAGGAGAACATAAAAAAAGAGTCCG
GACAAGAAAACGACGAAGATGAAGCGGCCGTAGATGACCAAGACTATCTT
AACGAGGATGAGCTCGCAGAGCTTCAACGAGATGAGGAGAACATAAAAAA
AGAGATCATATTTGAGGGAGAAGAGAAGCGCGGGCGGCCAGATATTGGCG
ACATCGTCCGCATTCACTACACTTGCGCGCTGCAGGAAAGCGGCGGTAAC
GGCAGTGGCAGAAGCAGTAGAAGAAGCGGAGGCTCCCGCGCAGTGAGTGG
TGAGGGCAGCAGCGAGCACGACGGCGGTGGTGACGCCGGTGTTATAGAAA
GCTCCCGTAAGAACAGGCGACGACCGCTTGAGTTCGTCGTCGGGGCGGGG
CAGGTGGTCAAGGGGATTGACCGATCGATCCGGCAGATGCTGCACGGGGA
GCGGGCGAGGGTTTTCGTCACGGCTCTGTACGGCTACGGAGACAAGGGGC
ATCCGCCGACGATCCCGCCACGGGCAGCCCTCGTGTTCGACGTGAACTTG
CTGGACTTCTGGCCCCGGCCGAGGTGGCAGAAGCCGCTTGTGCAGGTGCT
GTCCGAGCCCTACAGGGAAACGCCGTACGCTCCGCGAATGCAGTCGCCGG
CAGGGGGGGGTGGTACTGCAGGTGCCGGAGGGGTGGCCACTTCACCCGCA
GATGGTAGCACCGGTGTCGGTGGTGGCCCCACCGTGGATGGGTTGTCAGA
CTATCCTTACGGCAAAGTTGGGAGATACTAGATCATATTTGAGGGAGAAG
AGAAGCGCGGGCGGCCAGATATTGGCGACATCGTCCGCATTCACTACACT
TGCGCGCTGCAGGAAAGCGGCGGTAACGGCAGTGGCAGAAGCAGTAGAAG
AAGCGGAGGCTCCCGCGCAGTGAGTGGTGAGGGCAGCAGCGAGCACGACG
GCGGTGGTGACGCCGGTGTTATAGAAAGCTCCCGTAAGAACAGGCGACGA
CCGCTTGAGTTCGTCGTCGGGGCGGGGCAGGTGGTCAAGGGGATTGACCG
ATCGATCCGGCAGATGCTGCACGGGGAGCGGGCGAGGGTTTTCGTCACGG
CTCTGTACGGCTACGGAGACAAGGGGCATCCGCCGACGATCCCGCCACGG
GCAGCCCTCGTGTTCGACGTGAACTTGCTGGACTTCTGGCCCCGGCCGAG
GTGGCAGAAGCCGCTTGTGCAGGTGCTGTCCGAGCCCTACAGGGAAACGC
CGTACGCTCCGCGAATGCAGTCGCCGGCAGGGGGGGGTGGTACTGCAGGT
GCCGGAGGGGTGGCCACTTCACCCGCAGATGGTAGCACCGGTGTCGGTGG
TGGCCCCACCGTGGATGGGTTGTCAGACTATCCTTACGGCAAAGTTGGGA
GATACTAG
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