mRNA_E-fasciculatus_F_contig1499.3535.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1499.3535.1 vs. uniprot
Match: D7FNG8_ECTSI (Enoyl-CoA hydratase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNG8_ECTSI) HSP 1 Score: 401 bits (1031), Expect = 5.970e-136 Identity = 209/229 (91.27%), Postives = 219/229 (95.63%), Query Frame = 3
Query: 327 MMVQLADAVNELEKWDRGVALVVHGTGGNFCAGADLSLAREHLRTGADGRSMCALMSDTLTRLRRLPLISVAAIDGAAVGGGAELATSCDFRVAGRECSIRFVQVKMGVSTGWGGGARLVGIVGRRAALRLLAWSPPLAADEAVSLGLVDAVAAEEGGALAVAREFLDGVLTQDAHEAVRAVKKVVAAADLPVSEGLHRAEADEFSALWGGAHNRMALEPPSSSRPPAS 1013
MMVQL+DAV+ELE+WDRGVALVVHG GGNFCAGADLSLAREHLRTGADGRSMCALMSDTLTRLRRLPLISVAAIDGAA+GGGAELATSCDFRVAG E +IRFVQVKMGVSTGWGGGARLVG+VGRRAALRLLAWSPPLAADEA +LGLVDAVA EEGGALA AREFL GVLTQDAHEAVRAVK+VVAAAD+PVS+ LHRAEADEFSALWGGAHNRMALEPPSS RPP S
Sbjct: 1 MMVQLSDAVDELEQWDRGVALVVHGMGGNFCAGADLSLAREHLRTGADGRSMCALMSDTLTRLRRLPLISVAAIDGAAIGGGAELATSCDFRVAGPESNIRFVQVKMGVSTGWGGGARLVGLVGRRAALRLLAWSPPLAADEAAALGLVDAVAEEEGGALAAAREFLGGVLTQDAHEAVRAVKRVVAAADVPVSDRLHRAEADEFSALWGGAHNRMALEPPSSPRPPRS 229
BLAST of mRNA_E-fasciculatus_F_contig1499.3535.1 vs. uniprot
Match: A0A835Z365_9STRA (ClpP/crotonase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z365_9STRA) HSP 1 Score: 266 bits (679), Expect = 8.120e-81 Identity = 156/260 (60.00%), Postives = 176/260 (67.69%), Query Frame = 3
Query: 207 FKDRLRPLGPGRVDLALDDRSGLATLILDNHDRRNALSGTMMVQLADAVNELEKWDRGVALVVHGTGGN-FCAGADLSLAREHLRTGADGRSMCALMSDTLTRLRRLPLISVAAIDGAAVGGGAELATSCDFRVAGRECSIRFVQVKMGVSTGWGGGARLVGIVGRRAALRLLAWSPPLAADEAVSLGLVDAVAAEEGGALAVAREFLDGVLTQDAHEAVRAVKKVVAAADLPVSEGLHRAEADEFSALWGGAHNRMALE 983
FKDRL LG G V +DD SGLA + L N D RNALSG MMV+LADAV +E+W RGVAL++ G FCAGADL+LAR HL T DGR MCALM+DTL RLR LPL+SVAA+ G AVGGGAEL+T+CD+RV IRFVQVKMGVSTGWGG ARL IVG R ALRLLAW L+A A LGLVD V E A A FL+ + TQ AVRAVK VAAA E + AE F ++WGG HNR LE
Sbjct: 15 FKDRLSVLGAGHVHYTMDDASGLARIELRNPDSRNALSGRMMVELADAVAAVERWHRGVALILTAEGDRAFCAGADLALARNHLTTPWDGRLMCALMTDTLHRLRALPLVSVAAVKGPAVGGGAELSTACDYRVMSSAAHIRFVQVKMGVSTGWGGAARLTRIVGSRQALRLLAWGEQLSASAAQQLGLVDLVTEEGEDAETSANTFLEPLTTQPNWRAVRAVKAAVAAASAIPEENV-LAERAAFISVWGGDHNRSVLE 273
BLAST of mRNA_E-fasciculatus_F_contig1499.3535.1 vs. uniprot
Match: A0A7S4B265_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B265_CHRCT) HSP 1 Score: 220 bits (561), Expect = 2.510e-64 Identity = 133/265 (50.19%), Postives = 168/265 (63.40%), Query Frame = 3
Query: 198 LREFKDRLRPL-GPGRVDLALDDRSGLATLILDNHDRRNALSGTMMVQLADAVNELEKWDRGVALVVHGTGGNFCAGADLSLAREHLRTGADGRSMCALMSDTLTRLRRLPLISVAAIDGAAVGGGAELATSCDFRVAGRECSIRFVQVKMGVSTGWGGGARLVGIVGRRAALRLLAWSPPLAADEAVSLGLVDAVAAEEGGALAVAREFL--DGVLTQDAHEAVRAVKKVVAAADLPVSEGLHRAEADEFSALWGGAHNRMALE 983
++ FK LR L GRV L D +G+A L L N RRNAL GTMM+QLADAV+ELE W +GVALVV G G FCAGADL LA++ + T G+ M LMS+TL R+ +LP+ISV A++GAA GGGAEL T+ D+RV + RFVQ +M VSTGWGG RL GIVGRR ALRL SP + A+ A++ GL DAVA E A E + + A+R++K VAA VS G RAE F+++W A N A++
Sbjct: 27 MQAFKASLRSLPSSGRVQLQTDQATGVAVLTLRNEARRNALCGTMMIQLADAVHELESWKQGVALVVTGAGRAFCAGADLHLAQKVINTPEQGQLMSELMSETLDRIAQLPMISVCAVNGAAFGGGAELTTATDWRVFASGATARFVQTQMAVSTGWGGAGRLTGIVGRRQALRLFLHSPLIDAEAALASGLADAVAPEGVNPADAAMELFVTPALRAAGSRAAIRSIKAAVAAHS-SVSAGARRAETQAFASVWASADNLRAVQ 290
BLAST of mRNA_E-fasciculatus_F_contig1499.3535.1 vs. uniprot
Match: A0A218V407_9PASE (Ethylmalonyl-CoA decarboxylase n=2 Tax=Lonchura striata domestica TaxID=299123 RepID=A0A218V407_9PASE) HSP 1 Score: 212 bits (539), Expect = 1.160e-60 Identity = 130/261 (49.81%), Postives = 167/261 (63.98%), Query Frame = 3
Query: 207 FKDRLRPLGPGRVDLALDDRSGLATLILDNHDRRNALSGTMMVQLADAVNELEKWDRGVALVVHGTGGNFCAGADLSLAREHLRTGADGRSMCALMSDTLTRLRRLPLISVAAIDGAAVGGGAELATSCDFRVAGRECSIRFVQVKMGVSTGWGGGARLVGIVGRRAALRLLAWSPPLAADEAVSLGLVDAV--AAEEGGALAVAREFLDGVLTQDAHEAVRAVKKVVAAA-DLPVSEGLHRAEADEFSALWGGAHNRMAL 980
K +L+ G ++L+ +D +G+A L L+N NA SGTMMV+L + V ELE W G L++HG G FC+G+DL++ +E + DG +MC M +TLTRL RLPLISVA + G A GGGAEL T+CDFR+ IRFV MG++ GWGGGARLV IVG AAL+LL + + + A SLGL +A AAEE GALA AR +L G T+ +RAVKKVVAA +LP+ L R E D F +WGG N AL
Sbjct: 70 IKKKLQQFSGGSINLSKED-NGIAILTLNNPKLMNAFSGTMMVELQEKVTELENWKDGKGLIIHGAGNTFCSGSDLNVVKE-ISNSQDGMNMCMFMQNTLTRLMRLPLISVALVQGKAFGGGAELTTACDFRLMTPGSEIRFVHKHMGLAPGWGGGARLVRIVGSGAALQLLGGAARVEPERARSLGLSEATLGAAEESGALAEARAWL-GQYTEGPAAVIRAVKKVVAAGRELPLEVAL-RTEKDIFGTVWGGPANLQAL 326
BLAST of mRNA_E-fasciculatus_F_contig1499.3535.1 vs. uniprot
Match: UPI00188586EE (ethylmalonyl-CoA decarboxylase-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI00188586EE) HSP 1 Score: 210 bits (534), Expect = 2.090e-60 Identity = 133/289 (46.02%), Postives = 175/289 (60.55%), Query Frame = 3
Query: 132 AMSSKRCIRHLFST----STPEEDGDLREFKDRLRPLGPGRVDLALDDRSGLATLILDNHDRRNALSGTMMVQLADAVNELEKWDRGVALVVHGTGGNFCAGADLSLAREHLRTGADGRSMCALMSDTLTRLRRLPLISVAAIDGAAVGGGAELATSCDFRVAGRECSIRFVQVKMGVSTGWGGGARLVGIVGRRAALRLLAWSPPLAADEAVSLGLVDA-VAAEEGGALAVAREFLDGVLTQDAHEAVRAVKKVVAAADLPVSEGLHRAEADEFSALWGGAHNRMALE 983
A+ + RHL + S DL E K +L G G VDL+LDD +G+A+L L+N DR+NALSG MM QL +AV LE+W G L++H G FC+G DLS R R DG M A M D L RL LPL+SV + G A+GGGAELA + DFR+ ++FVQ +MG+ TGWGGGARL ++G R AL LL P+AADEA+ LGL DA VA +G L AR++L + D VR+VK+++ + +SE L R E + F+ LWGG N+ AL+
Sbjct: 5 ALKLRSPCRHLLAMHRNCSVDNSYPDLAEVKQQLSQYGGGSVDLSLDDVTGMASLRLNNPDRKNALSGRMMAQLEEAVAALERWPAGRGLLLHAAGDAFCSGGDLSTVRAISRP-VDGMRMSAFMQDALARLAALPLVSVVVLAGRALGGGAELALAADFRLWTAGARLQFVQARMGLLTGWGGGARLAAMLGPRVALDLLTSCRPVAADEALRLGLADALVAPPDGDPLQFARDWLAPRVAHDVA-VVRSVKRMIVNSRGDMSE-LWRKERELFAPLWGGEANKKALD 290
BLAST of mRNA_E-fasciculatus_F_contig1499.3535.1 vs. uniprot
Match: B3RPF8_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RPF8_TRIAD) HSP 1 Score: 210 bits (534), Expect = 3.070e-60 Identity = 121/286 (42.31%), Postives = 174/286 (60.84%), Query Frame = 3
Query: 126 ACAMSSKRCIRHLFSTSTPEEDGDLREFKDRLRPLGPGRVDLALDDRSGLATLILDNHDRRNALSGTMMVQLADAVNELEKWDRGVALVVHGTGGNFCAGADLSLAREHLRTGADGRSMCALMSDTLTRLRRLPLISVAAIDGAAVGGGAELATSCDFRVAGRECSIRFVQVKMGVSTGWGGGARLVGIVGRRAALRLLAWSPPLAADEAVSLGLVDAVAAEEGGALAVAREFLDGVLTQDAHEAVRAVKKVVAAADLPVSEGLHRAEADEFSALWGGAHNRMALE 983
+C ++ K C RHL TS D +L+ + G++ L D S +A L +DN RNALSG+MMVQL DA+N+LE+W G +++ G FC+GADL+LA++ + G +MC LM TLTRL+RLP+IS+A I+G A+GGGAEL T+CDFR+ + IRFV VK GV+ GWGGG+RLV IVGRR ALRLLA S + A +A+ GL D + + + L +L ++ + +R +K++V AD ++ + E F+ +WG +LE
Sbjct: 21 SCVINRKGCYRHLSRTSVLSVT-DNTSIIQQLQKVEGGKIKLEKFDDSKIAVLTIDNERIRNALSGSMMVQLRDAINQLEEWKEGKGVILIGASSTFCSGADLNLAKQ-FNSPEHGEAMCELMQTTLTRLKRLPMISLAVIEGKALGGGAELTTACDFRLISKNAEIRFVHVKRGVTPGWGGGSRLVNIVGRRMALRLLAGSIKITAKDALQYGLADDIISSDQVTLHAGMNWLKKIIDGPVNS-IRGIKQIVTYADDLGTDQALQFERSVFTTVWGAPALMESLE 303
BLAST of mRNA_E-fasciculatus_F_contig1499.3535.1 vs. uniprot
Match: UPI001601EA24 (ethylmalonyl-CoA decarboxylase-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001601EA24) HSP 1 Score: 209 bits (532), Expect = 6.220e-60 Identity = 125/257 (48.64%), Postives = 163/257 (63.42%), Query Frame = 3
Query: 219 LRPLGPGRVDLALDDRSGLATLILDNHDRRNALSGTMMVQLADAVNELEKWDRGVALVVHGTGGNFCAGADLSLAREHLRTGADGRSMCALMSDTLTRLRRLPLISVAAIDGAAVGGGAELATSCDFRVAGRECSIRFVQVKMGVSTGWGGGARLVGIVGRRAALRLLAWSPPLAADEAVSLGLVDAVAAEEGGALAVAREFLDGVLTQDAHEAVRAVKKVVAA-ADLPVSEGLHRAEADEFSALWGG-AHNRMALE 983
L +G G VDL D+ SGLA L L+N +R NA++G MM+QLA+ VN+L+ W G AL+VHG G FC GADL++ R L + G+ MCA M TLT L RLPLISVAAIDG A+GGG+EL T+ DFRV +IRF+ MGV GWGGG RL +VGR AL LL+ P+ +EA+ +GL + + + E+L T+ E VRA+K VV A ++LPV E L R EA++F +WGG AH L+
Sbjct: 50 LTTVGGGTVDLTKDESSGLAVLTLNNPERLNAVTGNMMLQLANIVNDLKDWRNGKALIVHGKGHTFCPGADLNMVRNMLDS-KQGQEMCAFMHKTLTELHRLPLISVAAIDGHAIGGGSELCTATDFRVMTERANIRFIHALMGVVPGWGGGTRLTRLVGRTRALDLLSSGRPIGPEEALEIGLANWIIPTGHDVVEATAEWLQKY-TKGKTEVVRALKNVVVAGSELPVEEALER-EAEQFVDVWGGPAHEEAILK 303
BLAST of mRNA_E-fasciculatus_F_contig1499.3535.1 vs. uniprot
Match: A0A6P8HRW9_ACTTE (ethylmalonyl-CoA decarboxylase-like isoform X1 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HRW9_ACTTE) HSP 1 Score: 208 bits (529), Expect = 1.440e-59 Identity = 132/299 (44.15%), Postives = 177/299 (59.20%), Query Frame = 3
Query: 135 MSSKRCIRH----------LFSTSTPEEDGDLREFKDR--LRPLGPGRVDLALD----DRSGLATLILDNHDRRNALSGTMMVQLADAVNELEKWDRGVALVVHGTGGNFCAGADLSLAREHLRTGADGRSMCALMSDTLTRLRRLPLISVAAIDGAAVGGGAELATSCDFRVAGRECSIRFVQVKMGVSTGWGGGARLVGIVGRRAALRLLAWSPPLAADEAVSLGLVDAVAAEEGGALAVAREFLDGVLTQDAHEAVRAVKKVVAAAD-LPVSEGLHRAEADEFSALWGGAHNRMAL 980
M+S C+R+ LF ST E K R L+PL D+ L + +A++ +DN R+NAL+G MMVQLA+ ++ELE WD G +++ G G F +GADLS+A+ L T +G MC M TLT LRRLPL+S+A + G AVGGGAEL T+CDFR+ ++ +RFV KMG+S GWGGG+RLV IVGR AL +L + +E++ GLVDA E AL A ++L +D +RA+K VVAAAD LP+ E L E FS +WGG N+ AL
Sbjct: 1 MNSVSCLRNNAQILRSFTRLFYASTISNTPSFEEDKIRAKLKPLIGSGGDILLSYGVKNAKDIASITIDNPSRKNALTGHMMVQLAEIIDELETWDSGXGVILQGAEGTFASGADLSVAKAIL-TPEEGAEMCFFMQRTLTXLRRLPLVSLAVVQGKAVGGGAELTTACDFRIMSKDAEMRFVHAKMGLSPGWGGGSRLVKIVGRHKALEILLQCKRMDLEESLKCGLVDAELLESKDALETAADWL-APYVRDHSSVIRAIKGVVAAADDLPMDEAL-TVERSFFSTVWGGEANKNAL 296
BLAST of mRNA_E-fasciculatus_F_contig1499.3535.1 vs. uniprot
Match: A0A7S3F357_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F357_9EUKA) HSP 1 Score: 204 bits (518), Expect = 2.860e-58 Identity = 129/266 (48.50%), Postives = 166/266 (62.41%), Query Frame = 3
Query: 198 LREFKDRLRPLG-PGRVDLALDDRSGLATLILDNHDRRNALSGTMMVQLADAVNELEKWDRGVALVVHGTGGNFCAGADLSLAREH-LRTGADGRSMCALMSDTLTRLRRLPLISVAAIDGAAVGGGAELATSCDFRVAGRECSIRFVQVKMGVSTGWGGGARLVGIVGRRAALRLLAWSPPLAADEAVSLGLVDAVA-AEEGGALAVAREFLDGVLTQDAH-EAVRAVKKVVAAA-DLPVSEGLHRAEADEFSALWGGAHNRMAL 980
L++F RL L PGRV L S +A L L N +RRNA+SG MM LADAV ELE W+ GVA+++ G GG FC+G D LAR + + M LM+DTL RLR+LPL+SVAAIDG A+GGGAEL T+ D+RV + +RFV +MG +TGWGGGARLVG++GR AL+LLA PL + A +LGL D VA A E A A AR +D + A +++RA+K A+A D+P + E +WG NR AL
Sbjct: 11 LKDFVQRLSALPHPGRV--TLKKESSVAILTLSNPERRNAMSGPMMAGLADAVKELEMWNEGVAVILTGEGGTFCSGLDYELARGGTVSSPQQATLMSQLMTDTLHRLRQLPLLSVAAIDGFAIGGGAELTTATDWRVMASDAQVRFVHARMGATTGWGGGARLVGMLGRARALKLLAHGTPLDGNAAFALGLCDGVAQAGETAASAAARLLIDPAIAHSASVQSLRAIKSAFASASDIPPE--VRAEETQAIGRVWGSEANRNAL 272
BLAST of mRNA_E-fasciculatus_F_contig1499.3535.1 vs. uniprot
Match: A0A6P4ZPQ6_BRABE (ethylmalonyl-CoA decarboxylase-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZPQ6_BRABE) HSP 1 Score: 204 bits (519), Expect = 4.520e-58 Identity = 122/255 (47.84%), Postives = 161/255 (63.14%), Query Frame = 3
Query: 219 LRPLGPGRVDLALDDRSGLATLILDNHDRRNALSGTMMVQLADAVNELEKWDRGVALVVHGTGGNFCAGADLSLAREHLRTGADGRSMCALMSDTLTRLRRLPLISVAAIDGAAVGGGAELATSCDFRVAGRECSIRFVQVKMGVSTGWGGGARLVGIVGRRAALRLLAWSPPLAADEAVSLGLVDAVAAEEGGALAVAREFLDGVLTQDAHEAVRAVKKVVAA-ADLPVSEGLHRAEADEFSALWGGAHNRMAL 980
L G G VDL DD SGLA L L+N +R NA++G MM+QLAD VN+L++W G AL+VHG G FC GADL++ R L + GR MCA M TLT L RLPLISV AIDG A+GGGAEL T+ DFRV + IRFVQ +G+ GWGGG RL +VGR AL LL+ ++ +EAV +GL + + + +++ T+ E VRAVK VV A A++ + E L EA++F +WGG ++ A+
Sbjct: 46 LSSFGGGAVDLTKDDVSGLAVLTLNNPERLNAVTGNMMLQLADIVNDLKEWKGGKALIVHGKGHTFCTGADLNMVRNMLDS-KHGREMCAFMHKTLTELHRLPLISVTAIDGPAIGGGAELCTATDFRVMTEQAHIRFVQALLGIVPGWGGGTRLTRLVGRTRALDLLSSGRAISPEEAVEMGLANWMIPTGHDVVEATTDWVQKY-TKGKPEVVRAVKNVVVAGAEMSLEESLAE-EAEQFVNVWGGPAHQEAM 297 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1499.3535.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1499.3535.1 >prot_E-fasciculatus_F_contig1499.3535.1 ID=prot_E-fasciculatus_F_contig1499.3535.1|Name=mRNA_E-fasciculatus_F_contig1499.3535.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=327bp MFPSCTRLVQHRPTLLWPARIIASQAFRTDACAMSSKRCIRHLFSTSTPEback to top mRNA from alignment at E-fasciculatus_F_contig1499:3860..9209+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1499.3535.1 ID=mRNA_E-fasciculatus_F_contig1499.3535.1|Name=mRNA_E-fasciculatus_F_contig1499.3535.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5350bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1499:3860..9209+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1499:3860..9209+ >mRNA_E-fasciculatus_F_contig1499.3535.1 ID=mRNA_E-fasciculatus_F_contig1499.3535.1|Name=mRNA_E-fasciculatus_F_contig1499.3535.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1962bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1499:3860..9209+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |