prot_E-fasciculatus_F_contig1499.3534.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1499.3534.1
Unique Nameprot_E-fasciculatus_F_contig1499.3534.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length221
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1499.3534.1 vs. uniprot
Match: D7FNG7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG7_ECTSI)

HSP 1 Score: 373 bits (958), Expect = 7.090e-123
Identity = 194/202 (96.04%), Postives = 199/202 (98.51%), Query Frame = 0 
Query:   20 QAMLQEFLRSRDGNEMIGDLSEGLEARRDDLICPDPSRCHPRTPEDRAALQSGTVVVKGFRAKLPPQAVSELVVMSDELDINEVVCVELWSQVNEPWQRRALEKRLSDPAGSLSEDLPLAARKLFYLERRNLLMFEAELFKAALVEDLSPAKKAVIDREIFSLLEKDLASNLMSFVAKLLGPEGIRRTTPPSSTAATVGSSQ 221
            QAMLQEFLRSR+GNEMIGDLSEGLEARRDDLICPDPSRCHPRTPEDRAALQSG+VVVKGFRAKLPPQAVSELV +SDELDINEVVCV+LWSQVNEPWQRRALEKRLSDPAGSLSEDLPLAARKLFYLERRNLLMFEAELFKAALVEDLSPAKKAVIDREIFSLLEKDLASNLMSFVAKLLGPEGIRRTT PSSTAA +GSSQ
Sbjct:   11 QAMLQEFLRSREGNEMIGDLSEGLEARRDDLICPDPSRCHPRTPEDRAALQSGSVVVKGFRAKLPPQAVSELVALSDELDINEVVCVDLWSQVNEPWQRRALEKRLSDPAGSLSEDLPLAARKLFYLERRNLLMFEAELFKAALVEDLSPAKKAVIDREIFSLLEKDLASNLMSFVAKLLGPEGIRRTTSPSSTAAMLGSSQ 212
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BLAST of mRNA_E-fasciculatus_F_contig1499.3534.1 vs. uniprot
Match: A0A6H5L7W6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W6_9PHAE)

HSP 1 Score: 341 bits (874), Expect = 3.650e-116
Identity = 185/219 (84.47%), Postives = 189/219 (86.30%), Query Frame = 0 
Query:    3 QSQDAVGLDHNVSLTDLQAMLQEFLRSRDGNEMIGDLSEGLEARRDDLICPDPSRCHPRTPEDRAALQSGTVVVKGFRAKLPPQAVSELVVMSDELDINEVVCVELWSQVNEPWQRRALEKRLSDPAGSLSEDLPLAARKLFYLERRNLLMFEAELFKAALVEDLSPAKKAVIDREIFSLLEKDLASNLMSFVAKLLGPEGIRRTTPPSSTAATVGSSQ 221
            +SQDAVGLDH+VSLTDLQAMLQEFLRSRDGNEMIGDLSEGLEARRDDLICPDPSRCHPRTPEDR ALQSG+VVVKGFRAK                             VNEPWQRRALEKRLSDPAGSLSEDLPLAARKLFYLERRNLLMFEAELFKAALVEDLSPAKKAVIDREIFSLLEKDLASNLMSFVAKLLGPEGIRRTTPP+STAATVGSSQ
Sbjct:    2 ESQDAVGLDHDVSLTDLQAMLQEFLRSRDGNEMIGDLSEGLEARRDDLICPDPSRCHPRTPEDRTALQSGSVVVKGFRAK-----------------------------VNEPWQRRALEKRLSDPAGSLSEDLPLAARKLFYLERRNLLMFEAELFKAALVEDLSPAKKAVIDREIFSLLEKDLASNLMSFVAKLLGPEGIRRTTPPTSTAATVGSSQ 191
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1499.3534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNG7_ECTSI7.090e-12396.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7W6_9PHAE3.650e-11684.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021827Nucleoporin Nup186/Nup192/Nup205PFAMPF11894Nup192coord: 35..174
e-value: 1.9E-8
score: 32.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1499contigE-fasciculatus_F_contig1499:114..3499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1499.3534.1mRNA_E-fasciculatus_F_contig1499.3534.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1499 114..3499 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1499.3534.1 ID=prot_E-fasciculatus_F_contig1499.3534.1|Name=mRNA_E-fasciculatus_F_contig1499.3534.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=221bp
MEQSQDAVGLDHNVSLTDLQAMLQEFLRSRDGNEMIGDLSEGLEARRDDL
ICPDPSRCHPRTPEDRAALQSGTVVVKGFRAKLPPQAVSELVVMSDELDI
NEVVCVELWSQVNEPWQRRALEKRLSDPAGSLSEDLPLAARKLFYLERRN
LLMFEAELFKAALVEDLSPAKKAVIDREIFSLLEKDLASNLMSFVAKLLG
PEGIRRTTPPSSTAATVGSSQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021827Nup186/Nup192/Nup205