prot_E-fasciculatus_F_contig14983.3528.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14983.3528.1
Unique Nameprot_E-fasciculatus_F_contig14983.3528.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length189
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14983.3528.1 vs. uniprot
Match: D7G965_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G965_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 2.690e-45
Identity = 109/188 (57.98%), Postives = 120/188 (63.83%), Query Frame = 0 
Query:    1 LSHLFLLAGRVSLRRNKAAIPVALVAVLVGGAAAQTIGPALAATADDLVIGGEACSSRWDANCDGDTTDEILFWLVFWGWKAIRLYWCLRSLWAAAVWLTGTAFFIDARRRASSFLLRWGVGGPAAPGAARVPQLGGPVGXXXXXXXXXXPAMRTLEE-EQDVELAVIPPRPVVEASAAVGQHPLPLP 187
            L+H     G VSL  NK A+ V + A+LVGGA A +  PA+AATADDLVIG EACSSRWDANCDGDT DE+LFWLV W W+  +LY C RS+ AAAVWLTGTAFFIDAR                               XXXXXXXXXX  MR LEE E DVELAVI PR  V A+A   QHPLPLP
Sbjct:   19 LAHFASSGGSVSLGHNKTALVVCMAALLVGGAWADS-SPAMAATADDLVIGEEACSSRWDANCDGDTMDEVLFWLVLWIWRGYKLYACARSVRAAAVWLTGTAFFIDARXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXIMRNLEEKEDDVELAVISPRSPVAAAAVAEQHPLPLP 200
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BLAST of mRNA_E-fasciculatus_F_contig14983.3528.1 vs. uniprot
Match: A0A6H5K376_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K376_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 1.660e-21
Identity = 44/61 (72.13%), Postives = 51/61 (83.61%), Query Frame = 0 
Query:   26 AVLVGGAAAQTIGPALAATADDLVIGGEACSSRWDANCDGDTTDEILFWLVFWGWKAIRLY 86
            A++VGGA+A    PA+AATADDLVIG EACSSRWDANCDGDT DE+LFWL  W W+A +LY
Sbjct:    3 ALMVGGASADP-SPAMAATADDLVIGEEACSSRWDANCDGDTMDEVLFWLALWIWRAYKLY 62
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14983.3528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G965_ECTSI2.690e-4557.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K376_9PHAE1.660e-2172.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..106
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 107..188
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..83
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
NoneNo IPR availableTMHMMTMhelixcoord: 83..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14983contigE-fasciculatus_F_contig14983:1138..3052 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14983.3528.1mRNA_E-fasciculatus_F_contig14983.3528.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14983 1138..3052 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14983.3528.1 ID=prot_E-fasciculatus_F_contig14983.3528.1|Name=mRNA_E-fasciculatus_F_contig14983.3528.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=189bp
LSHLFLLAGRVSLRRNKAAIPVALVAVLVGGAAAQTIGPALAATADDLVI
GGEACSSRWDANCDGDTTDEILFWLVFWGWKAIRLYWCLRSLWAAAVWLT
GTAFFIDARRRASSFLLRWGVGGPAAPGAARVPQLGGPVGGGGGGGVAAA
PAMRTLEEEQDVELAVIPPRPVVEASAAVGQHPLPLPP*
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