prot_E-fasciculatus_F_contig1496.3519.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1496.3519.1
Unique Nameprot_E-fasciculatus_F_contig1496.3519.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length409
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1496.3519.1 vs. uniprot
Match: A0A6H5JDM9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDM9_9PHAE)

HSP 1 Score: 358 bits (919), Expect = 2.170e-113
Identity = 186/212 (87.74%), Postives = 196/212 (92.45%), Query Frame = 0 
Query:   34 MDNEFGDDDGLRQARSRRRFQTGLVLILLLFFMDARTPQETQSRGTRAAQARTSAKNQEVTRTTVHRLAEDVLDHIVPLGPTYALRSSSNIKGEWRQSDADTDSFRTVVPEMKAADPSEGSGSKQRLDLKDEKIVPSNTETAHFSHSRMSATLVQAKGNPEVSMVHGTLNVGGAAAESGVETLFEGLFFHKYGHMSAVVGASGDELKVVWTP 245
            MDNEFGDDDGLRQARSRRRFQTGLV+ LL FFMDARTPQETQ RG RAAQARTSAKNQEVTRTTVHRLAE +LDHIVP GPTYALRSSSNIKGEWR SDA+  SFRTVVP MKAADPSEGSGSK RLDL+DE I PS+TETAHFSHS M A+LVQAKGNPEVS+VHGTLNVGGAA +SGV+TLFEGLFFHK+GHMSAVVGASGDELKVVWTP
Sbjct:    1 MDNEFGDDDGLRQARSRRRFQTGLVIFLLFFFMDARTPQETQDRGKRAAQARTSAKNQEVTRTTVHRLAEGLLDHIVPQGPTYALRSSSNIKGEWRLSDAE--SFRTVVPAMKAADPSEGSGSKHRLDLRDETIAPSDTETAHFSHSHMMASLVQAKGNPEVSIVHGTLNVGGAATKSGVDTLFEGLFFHKFGHMSAVVGASGDELKVVWTP 210
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1496.3519.1 vs. uniprot
Match: D8LPM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPM4_ECTSI)

HSP 1 Score: 349 bits (896), Expect = 2.070e-110
Identity = 185/213 (86.85%), Postives = 195/213 (91.55%), Query Frame = 0 
Query:   34 MDNEFGDDDGLRQARSRRRFQTGLVLILLLFFMDARTPQETQSRGTRAAQARTSAKNQEVTRTTVHRLAEDVLDHIVPLGPTYALRSSSNIKGEWRQSDADTDSFRTVVPEMKAADPSEGSGSKQRLDLKDEKIVPSNTETAHFSHSRMSATLVQAKGNPEVSMVHGTLNVGGAAAES-GVETLFEGLFFHKYGHMSAVVGASGDELKVVWTP 245
            MDNEFGDDDGLRQARSRRRFQTGLV+ LL FFMDARTPQETQ+RG RAAQARTSAKNQEVTRTTVHRLAE +LDHIVP GPTYALRSSS IKGEWR SDA+  SFRTVVP MKAADPSEGSGSK RLDL+DE I PS+TETAH SHSRM A+LVQAKGNPEVS+VHGTLNVG AA +S GV+TLFEGLFFHKYGHMSAVVGASGDELKVVWTP
Sbjct:    1 MDNEFGDDDGLRQARSRRRFQTGLVIFLLFFFMDARTPQETQNRGKRAAQARTSAKNQEVTRTTVHRLAEGLLDHIVPQGPTYALRSSSEIKGEWRLSDAE--SFRTVVPAMKAADPSEGSGSKHRLDLRDETIAPSDTETAHSSHSRMMASLVQAKGNPEVSIVHGTLNVGDAATKSSGVDTLFEGLFFHKYGHMSAVVGASGDELKVVWTP 211
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1496.3519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JDM9_9PHAE2.170e-11387.74RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LPM4_ECTSI2.070e-11086.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 388..408
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..52
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..409
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1496contigE-fasciculatus_F_contig1496:21..5952 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1496.3519.1mRNA_E-fasciculatus_F_contig1496.3519.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1496 21..5952 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1496.3519.1 ID=prot_E-fasciculatus_F_contig1496.3519.1|Name=mRNA_E-fasciculatus_F_contig1496.3519.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=409bp
RFHRVRAPEASPGGCVVPFSRHSAPPTEGDQEKMDNEFGDDDGLRQARSR
RRFQTGLVLILLLFFMDARTPQETQSRGTRAAQARTSAKNQEVTRTTVHR
LAEDVLDHIVPLGPTYALRSSSNIKGEWRQSDADTDSFRTVVPEMKAADP
SEGSGSKQRLDLKDEKIVPSNTETAHFSHSRMSATLVQAKGNPEVSMVHG
TLNVGGAAAESGVETLFEGLFFHKYGHMSAVVGASGDELKVVWTPPPANS
IAAAASPEVAGGIVPPSAAAAAAAPPPPPKVEPLEDNSVGGGAGGGDRLT
SGINEAADKGGEAADKGGESGSSNSTAAAAVGPAAAAASNSGSGGDAAGG
GTTNPVVVQTATDPPPAEEEEEETGTDDGGEGGGDEAVEEEEEEEEKEEE
EEKGGEGEG
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