mRNA_E-fasciculatus_F_contig14938.3506.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14938.3506.1 vs. uniprot
Match: D7FX33_ECTSI (Serine/threonine protein kinase with WD40 repeats n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX33_ECTSI) HSP 1 Score: 516 bits (1330), Expect = 5.600e-174 Identity = 292/376 (77.66%), Postives = 311/376 (82.71%), Query Frame = 1
Query: 1 LGVLLLSLLLPRGLFSSNYLTSRALHTAAEREALARSTTSKERLQIKYGMSFRTANDKSENGFQKRVIRSILLVTLEQDMRATACSFLRRMVDPDASERPDISEVRAWLPSIIQSAERQTQAMXXXXXXXXXXXXXXXXHLYFP*PRPGRCRRPGAPWNRFLRSPPPTAGRGGSPFSWRTRTVWRENTRPEGGDDSVQDSWIPSDGGSSHALAVGAATSVQDDVARNSGSEDAAFTVSGVSAIDVFGTNSSADISRQQGELSSHAGSVRLFSGAEAAGASDGLLPLLSGGECSTGGSRQARGGEGESTVDAEGWSEPVAAGHASVEGIVDGSSNGGEDAGALSAVDATLTLTPAI---VAEEGPTGGGTFGEDWGV 1119
LGVLLLSLLLPRGLFSSN+LTSR LHTAAEREALARSTTS++RL+IKYGMSFRTAND SENGFQKR++RS+L VTLEQ MR TACSFLRRMVDPDASERPDI EVRAWLPSIIQSAERQ++AM GRCRRPGAPWNRFLRSP PTAGRG SPFSWRTRTVWRE+TRPEG D SV DSW+PSD GSS ALAVGAATS QD VA +SG EDA+FT+SGVS IDV GTNSS D S+ QG LSS+A SVRLFSGAE AGAS+GLLPLLSGGECST GSRQ+RGGEGE TVDAEGWSEPV G ASVEGI DG NG EDAG LSAVD TLTLTPA+ VAEEGPTGGGTF EDWGV
Sbjct: 409 LGVLLLSLLLPRGLFSSNFLTSRVLHTAAEREALARSTTSRQRLEIKYGMSFRTANDTSENGFQKRMVRSVLFVTLEQTMRDTACSFLRRMVDPDASERPDIGEVRAWLPSIIQSAERQSRAMATA----------------------GRCRRPGAPWNRFLRSPLPTAGRGASPFSWRTRTVWREDTRPEGDDISVPDSWMPSDDGSSLALAVGAATSGQDGVAHDSGPEDASFTISGVSTIDVVGTNSSVDTSQHQGALSSNACSVRLFSGAEGAGASNGLLPLLSGGECSTSGSRQSRGGEGEETVDAEGWSEPVVTGGASVEGI-DG--NGNEDAGTLSAVDVTLTLTPAVPAMVAEEGPTGGGTFDEDWGV 759
BLAST of mRNA_E-fasciculatus_F_contig14938.3506.1 vs. uniprot
Match: A0A6H5JJE3_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJE3_9PHAE) HSP 1 Score: 324 bits (831), Expect = 7.120e-99 Identity = 250/512 (48.83%), Postives = 275/512 (53.71%), Query Frame = 1
Query: 1 LGVLLLSLLLPRGLFSSNYLTSRALHTAAEREALARSTTSKERLQIK----------------------------------------------------------YGMSFRTANDKSENGFQKRVIRSILLVTLEQDMRATACSFLRRMVDPDASERPDISEVRAWLPSIIQSAERQTQAMXXXXXXXXXXXXXXXXHLYFP*PRPGRCRRPGAPWNRFLRSPP------------------PTAGR----GGSPFSWR---------------------TRTVWRENTRPE--------------------------------GGDDSVQDSWIPSDGGSSHALAVGAATSVQDDVARNSGSEDAAFT-VSGVSAIDV-FGTNSSADISRQQGELSSHAGSVRLFSGAEAAGASDGLL-PLLSGGECSTGGSRQARGGEGESTVDAEGWSEPVAAGHASVEGIVDGSSNGGEDAGALSAVDATLTLTPAI---VAEEGPTGGGTFGEDWGV 1119
LGVLLLSLLLPRGLFSSNYLTSR LHTAAE+EALARSTTSK+RL IK Y MSFRTAND SENGFQKR++RS+L TLEQ MR TAC FLRRMVDPDAS+RPDI EVRAWLPSI+ SAERQT M P PR R F S P+AG GGS S+ + +EN P+ GGD+S DSW+PS GSS A+ GAA+SVQD VA +SGSEDA T +S VS IDV G NS ADIS+QQ ELSS+AGSVR FS A AAGASDGLL PLLSGG C TGGSRQARG +GE+TVDAEGWSEPV G ASVE + D NG DA A SAVD TLTLTPA+ V+EEGPTGGGTFGE W V
Sbjct: 424 LGVLLLSLLLPRGLFSSNYLTSRVLHTAAEKEALARSTTSKQRLNIKVRTSTSVLVQLMRTPSVVTNLLPKYGTWDDNFVPRLVLCRCHRMCTRVCRPLACLSLQYRMSFRTANDTSENGFQKRMVRSMLFATLEQTMRDTACDFLRRMVDPDASKRPDIGEVRAWLPSIVLSAERQTAVMAAAALVPTTPS---------PPPRLPLSRGGSVSTISFSSSXXXXXXXXXXXXRTSDSASSPSAGSTPSAGGSVESFSCAPSRGSSGGLAVLLEDEDGMAMSGAQENAIPDPHAAATTXXXXXXXXXXXXXXXXXXXXXAEAAGGDNSTPDSWMPSHDGSSLAVGAGAASSVQDGVAHSSGSEDAWSTGISSVSGIDVAVGINSGADISQQQVELSSNAGSVRFFSRAGAAGASDGLLLPLLSGGGCGTGGSRQARGEDGEATVDAEGWSEPVVTGCASVEDVDD---NGNADACASSAVDVTLTLTPAVPAMVSEEGPTGGGTFGEHWAV 923
BLAST of mRNA_E-fasciculatus_F_contig14938.3506.1 vs. uniprot
Match: D7FX16_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX16_ECTSI) HSP 1 Score: 313 bits (802), Expect = 3.310e-95 Identity = 224/454 (49.34%), Postives = 250/454 (55.07%), Query Frame = 1
Query: 1 LGVLLLSLLLPRGLFSSNYLTSRALHTAAEREALARSTTSKERLQIKYGMSFRTANDKSENGFQKRVIRSILLVTLEQDMRATACSFLRRMVDPDASERPDISEVRAWLPSIIQSAERQTQAMXXXXXXXXXXXXXXXXHLYFP*PRPGRCRRPGAPWNRFLRS--------------------------------------------------------------------------PPPTAGRGGSPFSWRTRTVWRENTRPEGGDDSVQDSWIPSDGGSSHALAVGAATSVQDDVARNSGSEDAAFT----VSGVSAIDVFGTNSSADISRQQGELSSHAGSVRLFSGAEAAGASDGLLPLLSGGECSTGGSRQARGGEGESTVDAEGWSEPVAAGHASVEGIVDGSSNGGEDAGALSAVDATLTLTPAI---VAEEGPTGGGTFGEDWGV 1119
LGVLLLSLLLPRGLFSSN+LTSR LHTAAEREALARSTTS++RL+IK+ MS RTAND SENGFQKR+IR +L VTLEQ MR TAC FLRRMVDPDAS+RPDI EVR+WLPSI++SAERQT M P PRP G + S PP A + + + GGD+S DSW+PS G+S A+ GAA SVQD VA NSGSEDA T VSGV A G NSSADIS+QQ + G LLPL+SGG CST GSRQARG +GE+TVDAEGWSEPVA G SVEGI+DG NG DAG SAVD TLTLTPA+ VAEEGPTG GTFGE W V
Sbjct: 382 LGVLLLSLLLPRGLFSSNFLTSRVLHTAAEREALARSTTSRQRLEIKFRMSSRTANDTSENGFQKRMIRGMLFVTLEQTMRDTACDFLRRMVDPDASKRPDIGEVRSWLPSIVRSAERQTAVMAAAALVPT-----------MPSPRPRLPLSRGGSVSTISFSSSGXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSSGRLAVVLEDEDGMAVSGQQEDATPNPPAAATAATATAAITPSMAGSTSAEAAGGDNSAPDSWMPSHDGASLAVGTGAAESVQDGVAHNSGSEDAWSTGTNSVSGVDA--AVGINSSADISQQQVRWARPTGL---------------LLPLVSGGGCSTSGSRQARGDDGEATVDAEGWSEPVAVGCVSVEGIIDG--NGSADAGTSSAVDVTLTLTPAVSAMVAEEGPTGDGTFGEHWAV 805
BLAST of mRNA_E-fasciculatus_F_contig14938.3506.1 vs. uniprot
Match: D7FI65_ECTSI (Protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI65_ECTSI) HSP 1 Score: 246 bits (628), Expect = 3.640e-73 Identity = 215/420 (51.19%), Postives = 237/420 (56.43%), Query Frame = 1
Query: 1 LGVLLLSLLLPRGLFSSNYLTSRALHTAAEREALARSTTSKERLQIKYGMSFRTANDKSENGFQKRVIRSILLVTLEQDMRATACSFLRRMVDPDASERPDISEVRAWLPSIIQSAERQTQAMXXXXXXXXXXXXXXXXHLYFP*PR-----------------------------------PGRCRRPGAPWNRFLRSPPPTAGRGG-----------------------SPF-------------SWRTRTVW-----------RENTRP--------------------EGGDDSVQDSWIPSDGGSSHALAVGAATSVQDDVARNSGSEDAAFT-VSGV-SAIDV-FGTNSSADISRQQGELSSHAGSVRLFSGAEAA-GASDGLL--PLLSGGECSTGGSRQAR-GGEGESTVDA 933
LGVLLLSLLLPRGLFSSNYLTSR L TAAE+EALAR TSK+RL+IKY MS RTA D S+NGFQKR++RS+L VTLEQ +R TA FLRRMVDPDAS+RPDI EVRAWLPSI++SAERQT M XXXXXXXXXXXXX R P P S + GR G SP SWR + RE P EG D+S DSW+PS SS AL+VGAA S QDDVAR+SG EDA T +SGV S ID G NSSADIS+QQGELSS AGSVR +GAEAA G SDGLL PLLSGGECSTG SRQ+R GGEGE+TVDA
Sbjct: 111 LGVLLLSLLLPRGLFSSNYLTSRVLQTAAEKEALARCRTSKQRLKIKYRMSSRTAKDTSDNGFQKRMVRSMLFVTLEQPIRDTARDFLRRMVDPDASKRPDICEVRAWLPSIVRSAERQTAVMAAAXXXXXXXXXXXXXXPLMARSRGSSVSTISFXXXXXXXXXXXXXXXXXARTSDSASSPSAGSAPXXXXXXEPFSSSVSCGRSGNYSAVVVPAVVPLTSGGSVLSARSPVESGSSVSSSSDGRSWRLAVLLEDEDGMEESGEREYVFPSPSAAAAITPSMAASSGAQREGVDNSAPDSWVPSHDVSSLALSVGAAASAQDDVARHSGPEDAWSTGISGVVSGIDAAVGINSSADISQQQGELSSSAGSVRFSTGAEAAAGESDGLLLLPLLSGGECSTGWSRQSRRGGEGEATVDA 530
BLAST of mRNA_E-fasciculatus_F_contig14938.3506.1 vs. uniprot
Match: D7G3V6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3V6_ECTSI) HSP 1 Score: 56.2 bits (134), Expect = 1.110e-6 Identity = 42/76 (55.26%), Postives = 48/76 (63.16%), Query Frame = 1
Query: 907 GEGESTVDAEGWSEPVAAGHASVEGIVDGSSNGGEDAG--ALSAVDATLTLTP---AIVAEEGPTGGGTFGEDWGV 1119
G G TVDAEGWSEPVAA SVEG+ DG+ AL AV+ TL LTP A++AEEG + GG FGE W V
Sbjct: 2 GWGRRTVDAEGWSEPVAARGVSVEGV-DGNXXXXXXXXXCALIAVNVTLPLTPTIPALMAEEG-SAGGAFGEHWAV 75 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14938.3506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14938.3506.1 >prot_E-fasciculatus_F_contig14938.3506.1 ID=prot_E-fasciculatus_F_contig14938.3506.1|Name=mRNA_E-fasciculatus_F_contig14938.3506.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=96bp MSFRTANDKSENGFQKRVIRSILLVTLEQDMRATACSFLRRMVDPDASERback to top mRNA from alignment at E-fasciculatus_F_contig14938:2..3175+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14938.3506.1 ID=mRNA_E-fasciculatus_F_contig14938.3506.1|Name=mRNA_E-fasciculatus_F_contig14938.3506.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3174bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14938:2..3175+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14938:2..3175+ >mRNA_E-fasciculatus_F_contig14938.3506.1 ID=mRNA_E-fasciculatus_F_contig14938.3506.1|Name=mRNA_E-fasciculatus_F_contig14938.3506.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=576bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14938:2..3175+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |