prot_E-fasciculatus_F_contig14936.3505.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14936.3505.1
Unique Nameprot_E-fasciculatus_F_contig14936.3505.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length453
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14936.3505.1 vs. uniprot
Match: D8LN85_ECTSI (Histone deacetylase superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN85_ECTSI)

HSP 1 Score: 360 bits (923), Expect = 2.570e-108
Identity = 286/376 (76.06%), Postives = 295/376 (78.46%), Query Frame = 0 
Query:  109 FSRGGAGPFFTPTPMAGPRPALARGGWASLSTSTAAATFVPPTPAPVAKEDGSDGGSHTAAVD-------------APGTTSPSDKA-AVSAGSPEAES--------SGSWWVNRPESVLRCLRELLLASSSLTK--------DGKRNGCDRTSGNGSADTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-QPKAQEDFAAGLRAGLLEELAGKMRLLLRAGLSAGGDAEGDDWGGVMRLEMGLEEYISLVEDVHRAVEWTTRQKHDSLMQQRKNSREDGLGKLKERLRRLESKRGAIRADLDRLRRRMVSKTDRIKTLRTLADECWAEGEPSIGRDTLDNLEVRGRRE 453
            FSRGGAGPFFTPTPMAGPRPALARGGWASL  STAAATF     A V KED                         AP  T PSDKA AVSAGSP            SG+WWVNRPESVLRCLRELL                DGKR+G D+ SGNG+ADT  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Q  AQEDFAAGLR GLLE+LAGKMRLLLRAGLS GG+AEGD  GGVMRLEMGLEEYISLVEDVHRAVE TTRQKHDSLMQ+RKNSREDGLGKLKERLRRLESKRG+IRADLDRLRRRMVSKTDRIKTLRTLADECWAEGEPSIGRDTLDNLE   R+E
Sbjct:  493 FSRGGAGPFFTPTPMAGPRPALARGGWASLFASTAAATFXXXXXAAVVKEDXXXXXXXXXXXXXXXXXXXXXXXXXAPEATGPSDKAMAVSAGSPAPXXXXXXXXXXSGAWWVNRPESVLRCLRELLXXXXXXXXXXXXXXXXDGKRHGYDKRSGNGTADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANAQEDFAAGLRGGLLEQLAGKMRLLLRAGLSWGGNAEGDRGGGVMRLEMGLEEYISLVEDVHRAVERTTRQKHDSLMQERKNSREDGLGKLKERLRRLESKRGSIRADLDRLRRRMVSKTDRIKTLRTLADECWAEGEPSIGRDTLDNLEAMIRKE 868
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14936.3505.1 vs. uniprot
Match: A0A6H5JK20_9PHAE (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK20_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 1.340e-95
Identity = 238/361 (65.93%), Postives = 246/361 (68.14%), Query Frame = 0 
Query:  109 FSRGGAGPFFTPTPMAGPRPALARGGWASLSTSTAAATFVPPTPAPVAKEDGSDGGSHTAAVDAPGTTSPSDKAAVSAGSPEAESSG---------SWWVNRPESVLRCLRELLLASSS--LTKDGKRNGCDRTSGNGSADTA-----AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPKAQEDFAAGLRAGLLEELAGKMRLLLRAGLSAGGDAEGDDWGGVMRLEMGLEEYISLVEDVHRAVEWTTRQKHDSLMQQRKNSREDGLGKLKERLRRLESKRGAIRADLDRLRRRMVSKTDRIKTLRTLADECWAEGEPSIGRDTLDNLEVRGRRE 453
            FSRGGAGPFFTPTPMAGPRPALA GGWASL  STAA                                                            +WWVNRPESVLRCLRELLL+SSS   +KDGKR+G DR +GNG+ADTA      XXXXXXXXXXXXXXX                             XXXXXXXXXX   AQEDFAAGLR GLLEELAGKMRLLLRAGLS GGDAEGD   GVMRLEMGLEEYISLVEDVHRAVE TTRQKHDSLMQQRKNS+EDGLGKLKERLRRLESKRGAIRADLDRLRRRMVSKTDRIKTLRTLADECWAEGEPSIGRDTLDNLE   R+E
Sbjct:  394 FSRGGAGPFFTPTPMAGPRPALASGGWASLFASTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWWVNRPESVLRCLRELLLSSSSPSSSKDGKRHGYDRRNGNGTADTADAXXXXXXXXXXXXXXXXXXXSLLLETAGGCGGTPSTSAGGAKASTVWQEXXXXXXXXXXXASAQEDFAAGLRGGLLEELAGKMRLLLRAGLSWGGDAEGDCGRGVMRLEMGLEEYISLVEDVHRAVERTTRQKHDSLMQQRKNSKEDGLGKLKERLRRLESKRGAIRADLDRLRRRMVSKTDRIKTLRTLADECWAEGEPSIGRDTLDNLEAMIRKE 754
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14936.3505.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LN85_ECTSI2.570e-10876.06Histone deacetylase superfamily n=1 Tax=Ectocarpus... [more]
A0A6H5JK20_9PHAE1.340e-9565.93Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 385..426

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14936contigE-fasciculatus_F_contig14936:272..3161 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14936.3505.1mRNA_E-fasciculatus_F_contig14936.3505.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14936 272..3161 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14936.3505.1 ID=prot_E-fasciculatus_F_contig14936.3505.1|Name=mRNA_E-fasciculatus_F_contig14936.3505.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=453bp
GGGGGGGGAGSSTAAPAAPAVAAIAGMDRVAVSLRAPPAAAALLPGTGGD
GGGGGGGDKQQRAAVPTPAAVTGVAAAGAEAAAGAAMPGSSSASGAKTSA
SGGGGGGGFSRGGAGPFFTPTPMAGPRPALARGGWASLSTSTAAATFVPP
TPAPVAKEDGSDGGSHTAAVDAPGTTSPSDKAAVSAGSPEAESSGSWWVN
RPESVLRCLRELLLASSSLTKDGKRNGCDRTSGNGSADTAAVVASPPPPP
PPPSSSSSALVSLLLETAGGGTPSTSAGGTKASTARQEQERRQKQQPKAQ
EDFAAGLRAGLLEELAGKMRLLLRAGLSAGGDAEGDDWGGVMRLEMGLEE
YISLVEDVHRAVEWTTRQKHDSLMQQRKNSREDGLGKLKERLRRLESKRG
AIRADLDRLRRRMVSKTDRIKTLRTLADECWAEGEPSIGRDTLDNLEVRG
RRE
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