mRNA_E-fasciculatus_F_contig14918.3497.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14918.3497.1 vs. uniprot
Match: A0A6H5LCN5_9PHAE (Utp12 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCN5_9PHAE) HSP 1 Score: 325 bits (833), Expect = 4.590e-103 Identity = 170/172 (98.84%), Postives = 171/172 (99.42%), Query Frame = 1
Query: 1 ISHNRSLDGVLDELHNKRLTEAGSLDMLEA-SDSDGEGERYRGANLALPGAERGADGSSRRTREEARSTCVRFSPTGREWAACTTDGLLLYSLDEAAVFDPSDLDETVTPEAVQDAIGRKEWAKALLMSLHLNERELREKAVDAVPLSEVPLTAKAVPAPYALRLLGVVADR 513
ISHNRSLDGVLDELHNKRLTEAGSLDMLEA SDSDGEGERYRGANLALPGAERGADGSSRRTREEARSTCVRFSPTGREWAACTTDGLLLYSLDEAAVFDPSDLDETVTPEAVQD+IGRKEWAKALLMSLHLNERELREKAVDAVPLSEVPLTAKAVPAPYALRLLGVVADR
Sbjct: 664 ISHNRSLDGVLDELHNKRLTEAGSLDMLEAGSDSDGEGERYRGANLALPGAERGADGSSRRTREEARSTCVRFSPTGREWAACTTDGLLLYSLDEAAVFDPSDLDETVTPEAVQDSIGRKEWAKALLMSLHLNERELREKAVDAVPLSEVPLTAKAVPAPYALRLLGVVADR 835
BLAST of mRNA_E-fasciculatus_F_contig14918.3497.1 vs. uniprot
Match: A0A836CGV6_9STRA (Periodic tryptophan protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGV6_9STRA) HSP 1 Score: 181 bits (459), Expect = 9.390e-50 Identity = 100/192 (52.08%), Postives = 129/192 (67.19%), Query Frame = 1
Query: 1 ISHNRSLDGVLDELHNKRLTEAGSLDMLEASDSDGEGERYRGANLALPGAERGADGSSR---------------------RTREEARSTCVRFSPTGREWAACTTDGLLLYSLDEAAVFDPSDLDETVTPEAVQDAIGRKEWAKALLMSLHLNERELREKAVDAVPLSEVPLTAKAVPAPYALRLLGVVADR 513
+SHNRSL+G+LDELH+ RLTE GSLD+L ASDS+GEG RG+ LPGA+RG +G + +T+E R+TCVRFSPTG+EWAA T G+LL++LD+ F P+DLDE TP A + AI R++WA+A+LM+L L E L +AVDAVP EVPL A+A+PA A RLL +A R
Sbjct: 618 VSHNRSLEGILDELHSGRLTEGGSLDLLPASDSEGEG---RGSGGGLPGAKRGNEGKRQPAHILTACLNARPRCCFRCRAQTKEAVRTTCVRFSPTGQEWAAATPHGVLLFALDDVTAFTPTDLDEDATPAAARAAIARRDWARAILMALTLGEAPLLAEAVDAVPPDEVPLVAQAIPAGLASRLLAALARR 806
BLAST of mRNA_E-fasciculatus_F_contig14918.3497.1 vs. uniprot
Match: L1II01_GUITC (Utp12 domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1II01_GUITC) HSP 1 Score: 157 bits (398), Expect = 1.560e-41 Identity = 84/170 (49.41%), Postives = 116/170 (68.24%), Query Frame = 1
Query: 1 ISHNRSLDGVLDELHNKRLTEAGSLDMLEASDSDGEGERYRGA-NLALPGAERGADGSSRRTREEARSTCVRFSPTGREWAACTTDGLLLYSLDEAAVFDPSDLDETVTPEAVQDAIGRKEWAKALLMSLHLNERELREKAVDAVPLSEVPLTAKAVPAPYALRLLGVVA 507
IS N+SLDG+LD+ + + +TEAG L+ ++ DS+ E E RG + LPGA+RG SSR+T + RSTC+RFSPTGR WAA TT+GLL+YSLDE + FDP DLD +TP + ++ KEW A+LM+L LNE + + VP ++PL ++PAPY R+L +VA
Sbjct: 607 ISSNQSLDGILDQFNTRNMTEAGPLNEID-HDSEEEREDARGRKDETLPGAKRGQLTSSRKTAKAIRSTCLRFSPTGRAWAAATTEGLLIYSLDETSSFDPLDLDLDITPARIYKSLEDKEWLDAILMALRLNEASVLRSVYERVPKQDIPLLVSSIPAPYVKRMLDLVA 775
BLAST of mRNA_E-fasciculatus_F_contig14918.3497.1 vs. uniprot
Match: A0A4P9XME7_9FUNG (WD40 repeat-like protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XME7_9FUNG) HSP 1 Score: 153 bits (387), Expect = 4.700e-40 Identity = 92/181 (50.83%), Postives = 121/181 (66.85%), Query Frame = 1
Query: 1 ISHNRSLDGVLDELHNKRLTEAGSLDMLEA-SDSD--------GEGERYRGA--NLALPGAERGADGSSRRTREEARSTCVRFSPTGREWAACTTDGLLLYSLDEAAVFDPSDLDETVTPEAVQDAIGRKEWAKALLMSLHLNERELREKAVDAVPLSEVPLTAKAVPAPYALRLLGVVAD 510
IS N S DGV + L++KR+TE G L++L+ +DSD G G R R A + +LPG +G D S+R R E RS CVRFSPTGR WAA TDGLLL+SLDEA FDP +LD +TP+AV A+ R+EW KAL MS+ LN+ L +++ +AVP S+VPL A ++P Y RLL +A+
Sbjct: 565 ISRNLSYDGVREMLNSKRMTEGGPLELLDPETDSDEEDARMDIGGGGRARRALQDKSLPGVRQG-DLSARNVRPEVRSKCVRFSPTGRIWAAAATDGLLLFSLDEAVQFDPIELDMDLTPDAVLKAVRRREWLKALAMSIRLNDTPLIQRSYEAVPPSDVPLVAASLPVKYLERLLRFIAE 744
BLAST of mRNA_E-fasciculatus_F_contig14918.3497.1 vs. uniprot
Match: K3X6G0_GLOUD (Utp12 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6G0_GLOUD) HSP 1 Score: 148 bits (373), Expect = 6.540e-39 Identity = 84/172 (48.84%), Postives = 111/172 (64.53%), Query Frame = 1
Query: 1 ISHNRSLDGVLDELHNKRLTEAGSLDMLEASDSDGE-GERYRGANLALPGAERGADGSSRRTREEARSTCVRFSPTGREWAACTTDGLLLYSLDEAAVFDPSDLDETVTPEAVQDAIGRKEWAKALLMSLHLNERELREKAVDAVPLSEVPLTAKAVPAPYALRLLGVVADR 513
ISHNRSLDG+LD L++ +T AG L S+ D E R A L GA+R D SRR E S V FSPTGR WAA TT+GLL+Y+LDE FDP DLDE +TP++++ + R+E+ KALLMSLHLNE +L E V+ VP+ + L A+++ Y RL+ ++A R
Sbjct: 297 ISHNRSLDGILDFLNSSHMTAAG----LSKSELDAHTAESGRAAGTELVGAKRAVDPGSRRKNLEVLSKAVMFSPTGRSWAAATTEGLLIYALDENLTFDPFDLDEDITPDSIKRTLKRQEFTKALLMSLHLNEEDLIETCVEGVPVESIALVAQSLKDVYLKRLMQLLAKR 464
BLAST of mRNA_E-fasciculatus_F_contig14918.3497.1 vs. uniprot
Match: A0A060S832_PYCCI (Utp12 domain-containing protein n=4 Tax=Trametes TaxID=5324 RepID=A0A060S832_PYCCI) HSP 1 Score: 149 bits (375), Expect = 2.130e-38 Identity = 80/170 (47.06%), Postives = 118/170 (69.41%), Query Frame = 1
Query: 1 ISHNRSLDGVLDELHNKRLTEAGSLDMLEASDSDGEGERYRGANLALPGAERGADGSSRRTREEARSTCVRFSPTGREWAACTTDGLLLYSLDEAAVFDPSDLDETVTPEAVQDAIGRKEWAKALLMSLHLNERELREKAVDAVPLSEVPLTAKAVPAPYALRLLGVVAD 510
IS N SLDG + L ++++TEAG++D+++ D E + + ALPGA+RG D S RR R+EAR+ CVRF+PTGR WAA +T+GLL+YS+DE+ FDP DLD +TP+A+ + R+E KAL+M+ LNER L +K +++P +++ L A+ +P Y +LL VAD
Sbjct: 623 ISQNLSLDGTEEFLDSRKVTEAGNIDLID--DRGDESDLEDRLDTALPGAQRG-DMSKRRYRQEARTKCVRFAPTGRAWAAASTEGLLIYSVDESTTFDPFDLDIELTPQALLSVLARREHLKALVMAFRLNERPLVQKVYESIPRADIRLVARGLPVVYVGQLLRFVAD 789
BLAST of mRNA_E-fasciculatus_F_contig14918.3497.1 vs. uniprot
Match: UPI0020073038 (WD40 repeat-like protein n=1 Tax=Epithele typhae TaxID=378194 RepID=UPI0020073038) HSP 1 Score: 148 bits (374), Expect = 2.890e-38 Identity = 83/170 (48.82%), Postives = 119/170 (70.00%), Query Frame = 1
Query: 1 ISHNRSLDGVLDELHNKRLTEAGSLDMLEASDSDGEGERYRGANLALPGAERGADGSSRRTREEARSTCVRFSPTGREWAACTTDGLLLYSLDEAAVFDPSDLDETVTPEAVQDAIGRKEWAKALLMSLHLNERELREKAVDAVPLSEVPLTAKAVPAPYALRLLGVVAD 510
IS N SLDG + L ++R+TEAG+LD+++ D + E + ALPGA+RG D S RR +EAR+ CVRFSPTGR WAA +T+GLL+Y++D++ FDP DLD +TP+AV D + R+E+ KAL+M+ L+ER L KA +AVP +++ L A+A+P Y L+ VA+
Sbjct: 623 ISENLSLDGTEEFLDSRRVTEAGNLDLVDDRGDDSDLEDRM--DTALPGAQRG-DMSKRRYHQEARTKCVRFSPTGRAWAAASTEGLLIYAVDDSVTFDPFDLDIDLTPQAVLDTLARREFLKALVMAFRLSERPLILKAYEAVPRADIRLVARALPVLYVGPLVRFVAE 789
BLAST of mRNA_E-fasciculatus_F_contig14918.3497.1 vs. uniprot
Match: A0A0J0XTN9_9TREE (Putative WD repeat protein n=1 Tax=Cutaneotrichosporon oleaginosum TaxID=879819 RepID=A0A0J0XTN9_9TREE) HSP 1 Score: 148 bits (374), Expect = 2.910e-38 Identity = 85/171 (49.71%), Postives = 119/171 (69.59%), Query Frame = 1
Query: 1 ISHNRSLDGVLDELHNKRLTEAGSLDMLEASDSD-GEGERYRGANLALPGAERGADGSSRRTREEARSTCVRFSPTGREWAACTTDGLLLYSLDEAAVFDPSDLDETVTPEAVQDAIGRKEWAKALLMSLHLNERELREKAVDAVPLSEVPLTAKAVPAPYALRLLGVVAD 510
IS N SLDG + L ++++TEAG+LD L+A+ +D + E A+ LPGA+RG D S RRTR +AR+ CVRFS TGR WAA +T+GLLLYSLDE A FDP DL +TPE+V + + AL+M+L LNE+ L ++ +AVP S+V L A+ +P P+AL+++ VA+
Sbjct: 625 ISENLSLDGTQELLDSRKMTEAGNLDSLDAAAADESDLEDRLAADATLPGAQRG-DLSKRRTRRDARTNCVRFSATGRSWAAASTEGLLLYSLDEGAAFDPVDLALDLTPESVLATLQNGDHLLALVMALRLNEKPLLQRVYEAVPPSDVRLVARQLPPPHALQMVRFVAE 794
BLAST of mRNA_E-fasciculatus_F_contig14918.3497.1 vs. uniprot
Match: A0A8H7ZQ07_9FUNG (Putative WD repeat protein n=1 Tax=Olpidium bornovanus TaxID=278681 RepID=A0A8H7ZQ07_9FUNG) HSP 1 Score: 148 bits (374), Expect = 2.960e-38 Identity = 79/170 (46.47%), Postives = 113/170 (66.47%), Query Frame = 1
Query: 1 ISHNRSLDGVLDELHNKRLTEAGSLDMLEASDSDGEGERYRGANLALPGAERGADGSSRRTREEARSTCVRFSPTGREWAACTTDGLLLYSLDEAAVFDPSDLDETVTPEAVQDAIGRKEWAKALLMSLHLNERELREKAVDAVPLSEVPLTAKAVPAPYALRLLGVVAD 510
IS N S DG D L+++ +TEAG +D+++ D+ + +L++PG++ D S RRTR EAR+ CVRFSPTGR WAA TT+GLLLYS+D+ FDP DLD VTP+AV++A+G +EW +AL+ + L E A DA+P ++VPL A+++ A Y R L +A
Sbjct: 612 ISRNLSFDGTQDYLNSRLMTEAGPIDLID--DTGDLSDLEDRLDLSMPGSQAHGDLSVRRTRPEARTKCVRFSPTGRAWAAATTEGLLLYSVDDRMAFDPFDLDVDVTPQAVEEAVGNREWLRALVTAFRLGEPTTLRDAYDAIPPADVPLVARSLSARYLERTLAFLAS 779
BLAST of mRNA_E-fasciculatus_F_contig14918.3497.1 vs. uniprot
Match: A0A2R5GPN5_9STRA (Guanine nucleotide-binding protein subunit beta-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GPN5_9STRA) HSP 1 Score: 148 bits (373), Expect = 4.040e-38 Identity = 80/170 (47.06%), Postives = 113/170 (66.47%), Query Frame = 1
Query: 1 ISHNRSLDGVLDELHNKRLTEAGSLDMLEASD-SDGEGERYRGANLALPGAERGADGSSRRTREEARSTCVRFSPTGREWAACTTDGLLLYSLDEAAVFDPSDLDETVTPEAVQDAIGRKEWAKALLMSLHLNERELREKAVDAVPLSEVPLTAKAVPAPYALRLLGVVA 507
+SHNRSLDG+LD+L +++LTEAG+ D L+ SD SD EGE ALPGA RG D R T+ E R CV+FSP G+EWAA TT+GL++Y+LD A +FDP L+E VTP+ V++ + + +A M+LHL E +L + A+P + L A+ +P Y R+L ++A
Sbjct: 640 LSHNRSLDGILDKLDSRKLTEAGNSDTLDLSDASDSEGEDMAARAKALPGASRG-DLGKRITKPEIRCKCVQFSPNGQEWAAATTEGLMIYALDNAMLFDPFQLEEDVTPDRVREVALKGDHGRAFTMALHLGEDDLITELYRAIPTESLDLVARGLPVVYVSRVLALIA 808 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14918.3497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14918.3497.1 >prot_E-fasciculatus_F_contig14918.3497.1 ID=prot_E-fasciculatus_F_contig14918.3497.1|Name=mRNA_E-fasciculatus_F_contig14918.3497.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=124bp MGFWTSCTTRGSPKRGLWTCSRRLTAMGRGSDIAAQTLPCPVRSAVPTAPback to top mRNA from alignment at E-fasciculatus_F_contig14918:1697..2924- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14918.3497.1 ID=mRNA_E-fasciculatus_F_contig14918.3497.1|Name=mRNA_E-fasciculatus_F_contig14918.3497.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1228bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14918:1697..2924- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14918:1697..2924- >mRNA_E-fasciculatus_F_contig14918.3497.1 ID=mRNA_E-fasciculatus_F_contig14918.3497.1|Name=mRNA_E-fasciculatus_F_contig14918.3497.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=744bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14918:1697..2924- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |