mRNA_E-fasciculatus_F_contig149.3487.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig149.3487.1
Unique NamemRNA_E-fasciculatus_F_contig149.3487.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig149.3487.1 vs. uniprot
Match: A0A2D4C0N7_PYTIN (Sporangia induced Bardet-Biedl syndrome 4 protein n=4 Tax=Pythium TaxID=4797 RepID=A0A2D4C0N7_PYTIN)

HSP 1 Score: 191 bits (484), Expect = 8.310e-57
Identity = 86/113 (76.11%), Postives = 99/113 (87.61%), Query Frame = 1 
Query:   40 VQTPNSAQLWNNIGMCFFGKGKYIAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLNPDFAASYMYLAITLARLEDFDNACSAYDKVTHDQELQTSFRI 378
            VQTPNSAQLWNNIGMCFFGK +++A+VACLKRALYLDPFEWI +YNLGLVHLNT QYASAFHHFSAAINL PDFA+SYMYLAITL RL+DF+NACSA++K    + +   F +
Sbjct:  262 VQTPNSAQLWNNIGMCFFGKQRFVASVACLKRALYLDPFEWITSYNLGLVHLNTGQYASAFHHFSAAINLKPDFASSYMYLAITLGRLDDFENACSAFEKAIEMETVDHMFHL 374
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BLAST of mRNA_E-fasciculatus_F_contig149.3487.1 vs. uniprot
Match: A0A813DI01_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DI01_POLGL)

HSP 1 Score: 189 bits (479), Expect = 8.550e-57
Identity = 85/100 (85.00%), Postives = 94/100 (94.00%), Query Frame = 1 
Query:   40 VQTPNSAQLWNNIGMCFFGKGKYIAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLNPDFAASYMYLAITLARLEDFDNACSAYDK 339
            VQTPNSAQLWNNIGMCFFGK KY+AA+ACLKRALYLDPFEW+++YNLGLVHLNT QYASAFH FSA+INL PDF ASYMYLAITL+RL+DF NACSAY+K
Sbjct:  259 VQTPNSAQLWNNIGMCFFGKTKYVAAIACLKRALYLDPFEWLISYNLGLVHLNTGQYASAFHFFSASINLKPDFPASYMYLAITLSRLDDFSNACSAYEK 358
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BLAST of mRNA_E-fasciculatus_F_contig149.3487.1 vs. uniprot
Match: A0A812YNC6_9DINO (Bbs4 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812YNC6_9DINO)

HSP 1 Score: 185 bits (469), Expect = 1.830e-56
Identity = 83/100 (83.00%), Postives = 93/100 (93.00%), Query Frame = 1 
Query:   40 VQTPNSAQLWNNIGMCFFGKGKYIAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLNPDFAASYMYLAITLARLEDFDNACSAYDK 339
            V TPNSAQLWNNIGMCFFGK KY+AA+ACLKRALYLDPFEWI++YNLGLVHLNT Q+ASAFH FSA+INL PDF +SYMYLAITL+RL+DF NACSAY+K
Sbjct:   93 VHTPNSAQLWNNIGMCFFGKTKYVAAIACLKRALYLDPFEWIISYNLGLVHLNTGQFASAFHFFSASINLKPDFPSSYMYLAITLSRLDDFSNACSAYEK 192
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BLAST of mRNA_E-fasciculatus_F_contig149.3487.1 vs. uniprot
Match: A0A7S0WJK8_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WJK8_9CHLO)

HSP 1 Score: 182 bits (463), Expect = 3.490e-56
Identity = 82/100 (82.00%), Postives = 94/100 (94.00%), Query Frame = 1 
Query:   40 VQTPNSAQLWNNIGMCFFGKGKYIAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLNPDFAASYMYLAITLARLEDFDNACSAYDK 339
            VQTPNSAQLWNNIGMCFFGK +YIAA+ACLK+ALYLDPFEWI++YNLGLVHLNT Q ASAFH FSA+INL PDF +SYMYLAITL++L+DF+NACSAY+K
Sbjct:   48 VQTPNSAQLWNNIGMCFFGKQRYIAAIACLKKALYLDPFEWIISYNLGLVHLNTGQNASAFHFFSASINLKPDFPSSYMYLAITLSKLDDFENACSAYEK 147
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BLAST of mRNA_E-fasciculatus_F_contig149.3487.1 vs. uniprot
Match: A0A7S1EVP4_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1EVP4_NOCSC)

HSP 1 Score: 188 bits (477), Expect = 7.830e-56
Identity = 87/113 (76.99%), Postives = 99/113 (87.61%), Query Frame = 1 
Query:   40 VQTPNSAQLWNNIGMCFFGKGKYIAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLNPDFAASYMYLAITLARLEDFDNACSAYDKVTHDQELQTSFRI 378
            V TPNSAQLWNNIGMCFFGKGKY+A++ACLKRALYLDPFEWI+AYNLGLVHLNT Q+ASAFH FSA+INL PDF +SYMYLAITL+RL+DF NACSAY+K   D E +  F +
Sbjct:  255 VHTPNSAQLWNNIGMCFFGKGKYVASIACLKRALYLDPFEWIIAYNLGLVHLNTGQHASAFHFFSASINLKPDFPSSYMYLAITLSRLDDFANACSAYEKAI-DMESEHVFHL 366
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BLAST of mRNA_E-fasciculatus_F_contig149.3487.1 vs. uniprot
Match: A0A7S3GDF2_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GDF2_9EUKA)

HSP 1 Score: 186 bits (473), Expect = 2.390e-55
Identity = 82/99 (82.83%), Postives = 95/99 (95.96%), Query Frame = 1 
Query:   43 QTPNSAQLWNNIGMCFFGKGKYIAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLNPDFAASYMYLAITLARLEDFDNACSAYDK 339
            QTPNSAQLWNNIGMCFFGK +Y+AA+ACLK+ALYLDPFEWI++YNLGLVHLNT QYASAFH+FSA+INL PDF +SYMYLAITL+RL+DF+NACSAY+K
Sbjct:  245 QTPNSAQLWNNIGMCFFGKQRYVAAIACLKKALYLDPFEWIISYNLGLVHLNTGQYASAFHYFSASINLKPDFPSSYMYLAITLSRLDDFENACSAYEK 343
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BLAST of mRNA_E-fasciculatus_F_contig149.3487.1 vs. uniprot
Match: A0A8J6CHX9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CHX9_DIALT)

HSP 1 Score: 186 bits (472), Expect = 3.710e-55
Identity = 83/100 (83.00%), Postives = 94/100 (94.00%), Query Frame = 1 
Query:   40 VQTPNSAQLWNNIGMCFFGKGKYIAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLNPDFAASYMYLAITLARLEDFDNACSAYDK 339
            V TPNSAQLWNNIGMCFFGK +Y+AA+ACLKRALYLDPFEWI++YNLGLVHLNT QYASAFH FS++INL PDF +SYMYLAITL+RL+DFDNACSAY+K
Sbjct:  248 VATPNSAQLWNNIGMCFFGKQRYVAAIACLKRALYLDPFEWIISYNLGLVHLNTGQYASAFHFFSSSINLKPDFPSSYMYLAITLSRLDDFDNACSAYEK 347
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BLAST of mRNA_E-fasciculatus_F_contig149.3487.1 vs. uniprot
Match: A0A482RCE6_9ARCH (Tetratricopeptide repeat protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RCE6_9ARCH)

HSP 1 Score: 181 bits (458), Expect = 4.030e-55
Identity = 82/101 (81.19%), Postives = 92/101 (91.09%), Query Frame = 1 
Query:   40 VQTPNSAQLWNNIGMCFFGKGKYIAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLNPDFAASYMYLAITLARLEDFDNACSAYDKV 342
            VQTPNSAQLWNNIGMCFF K KYIAAVACLKRALYLDPFEWI+AYNLG+ HL+  QYASAFH+ SA+INL PDFA++YMYL ITLARL D+DN+CSAY+KV
Sbjct:   19 VQTPNSAQLWNNIGMCFFSKTKYIAAVACLKRALYLDPFEWIIAYNLGIAHLSMGQYASAFHYLSASINLKPDFASAYMYLGITLARLGDYDNSCSAYEKV 119
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BLAST of mRNA_E-fasciculatus_F_contig149.3487.1 vs. uniprot
Match: D0MXK6_PHYIT (Sporangia induced Bardet-Biedl syndrome 4 protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=D0MXK6_PHYIT)

HSP 1 Score: 186 bits (471), Expect = 7.220e-55
Identity = 84/99 (84.85%), Postives = 93/99 (93.94%), Query Frame = 1 
Query:   43 QTPNSAQLWNNIGMCFFGKGKYIAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLNPDFAASYMYLAITLARLEDFDNACSAYDK 339
            QTPNSAQLWNNIGMCFFGK +Y+A+VACLKRALYLDPFEWI +YNLGLVHLNT QYASAFH FSAAINL PDF +SYMYLAITL+RL+DF+NACSA+DK
Sbjct:  264 QTPNSAQLWNNIGMCFFGKQRYVASVACLKRALYLDPFEWITSYNLGLVHLNTGQYASAFHFFSAAINLKPDFPSSYMYLAITLSRLDDFENACSAFDK 362
[Close]
BLAST of mRNA_E-fasciculatus_F_contig149.3487.1 vs. uniprot
Match: A0A7S0I5X3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I5X3_9EUKA)

HSP 1 Score: 184 bits (467), Expect = 7.530e-55
Identity = 81/100 (81.00%), Postives = 94/100 (94.00%), Query Frame = 1 
Query:   40 VQTPNSAQLWNNIGMCFFGKGKYIAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLNPDFAASYMYLAITLARLEDFDNACSAYDK 339
            VQTPNSAQLWNNIGMCFFGK +Y+A++ACLKRALYLDPFEWI++YNLGLVHLNT QYASAFH+FS +INL PDF +SYMYLAITL RL+DF+NAC+AY+K
Sbjct:  272 VQTPNSAQLWNNIGMCFFGKQRYVASIACLKRALYLDPFEWIISYNLGLVHLNTGQYASAFHYFSTSINLKPDFPSSYMYLAITLNRLDDFENACAAYEK 371
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig149.3487.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D4C0N7_PYTIN8.310e-5776.11Sporangia induced Bardet-Biedl syndrome 4 protein ... [more]
A0A813DI01_POLGL8.550e-5785.00Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A812YNC6_9DINO1.830e-5683.00Bbs4 protein n=1 Tax=Symbiodinium sp. CCMP2592 Tax... [more]
A0A7S0WJK8_9CHLO3.490e-5682.00Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A7S1EVP4_NOCSC7.830e-5676.99Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A7S3GDF2_9EUKA2.390e-5582.83Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A8J6CHX9_DIALT3.710e-5583.00Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A482RCE6_9ARCH4.030e-5581.19Tetratricopeptide repeat protein (Fragment) n=1 Ta... [more]
D0MXK6_PHYIT7.220e-5584.85Sporangia induced Bardet-Biedl syndrome 4 protein ... [more]
A0A7S0I5X3_9EUKA7.530e-5581.00Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig149contigE-fasciculatus_F_contig149:35646..37335 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score190.7
Seed ortholog evalue4.3e-46
Seed eggNOG ortholog42099.EPrPV00000020015
Preferred nameBBS4
KEGG koko:K11447,ko:K16531
KEGG Pathwayko05202,map05202
GOsGO:0000003,GO:0000086,GO:0000226,GO:0000242,GO:0000278,GO:0000281,GO:0000288,GO:0000291,GO:0000785,GO:0000910,GO:0000956,GO:0001085,GO:0001103,GO:0001654,GO:0001708,GO:0001750,GO:0001754,GO:0001764,GO:0001838,GO:0001841,GO:0001843,GO:0001894,GO:0001895,GO:0001917,GO:0001947,GO:0002009,GO:0003006,GO:0003007,GO:0003008,GO:0003013,GO:0003073,GO:0003085,GO:0003143,GO:0003352,GO:0003356,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005929,GO:0006139,GO:0006325,GO:0006401,GO:0006402,GO:0006464,GO:0006482,GO:0006725,GO:0006807,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007098,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0007600,GO:0007606,GO:0007608,GO:0007610,GO:0008015,GO:0008064,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008214,GO:0008217,GO:0009056,GO:0009057,GO:0009506,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009892,GO:0009933,GO:0009934,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010564,GO:0010605,GO:0010629,GO:0010638,GO:0010639,GO:0012505,GO:0014020,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016331,GO:0016358,GO:0016462,GO:0016477,GO:0016569,GO:0016570,GO:0016577,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019216,GO:0019221,GO:0019222,GO:0019439,GO:0019538,GO:0019953,GO:0021537,GO:0021543,GO:0021544,GO:0021591,GO:0021756,GO:0021761,GO:0021766,GO:0021915,GO:0021987,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030054,GO:0030154,GO:0030182,GO:0030534,GO:0030832,GO:0030833,GO:0030837,GO:0030900,GO:0031023,GO:0031090,GO:0031175,GO:0031253,GO:0031333,GO:0031344,GO:0031346,GO:0031410,GO:0031514,GO:0031667,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032095,GO:0032096,GO:0032098,GO:0032099,GO:0032101,GO:0032102,GO:0032104,GO:0032105,GO:0032107,GO:0032108,GO:0032231,GO:0032271,GO:0032272,GO:0032391,GO:0032400,GO:0032401,GO:0032402,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032507,GO:0032535,GO:0032870,GO:0032879,GO:0032886,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033059,GO:0033210,GO:0033365,GO:0034097,GO:0034260,GO:0034451,GO:0034452,GO:0034453,GO:0034454,GO:0034464,GO:0034504,GO:0034613,GO:0034641,GO:0034655,GO:0034708,GO:0035050,GO:0035097,GO:0035148,GO:0035176,GO:0035239,GO:0035295,GO:0035327,GO:0035845,GO:0035869,GO:0036064,GO:0036211,GO:0038108,GO:0040008,GO:0040011,GO:0040012,GO:0040014,GO:0040018,GO:0042221,GO:0042461,GO:0042462,GO:0042592,GO:0042995,GO:0043005,GO:0043009,GO:0043014,GO:0043086,GO:0043087,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043412,GO:0043473,GO:0043928,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044320,GO:0044321,GO:0044380,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044430,GO:0044431,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044451,GO:0044459,GO:0044463,GO:0044464,GO:0044666,GO:0044703,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0045165,GO:0045185,GO:0045444,GO:0045494,GO:0045724,GO:0045776,GO:0045927,GO:0046483,GO:0046530,GO:0046548,GO:0046700,GO:0046907,GO:0048232,GO:0048468,GO:0048487,GO:0048507,GO:0048509,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048532,GO:0048562,GO:0048568,GO:0048583,GO:0048585,GO:0048592,GO:0048598,GO:0048609,GO:0048638,GO:0048639,GO:0048646,GO:0048666,GO:0048699,GO:0048729,GO:0048731,GO:0048854,GO:0048856,GO:0048869,GO:0048870,GO:0048871,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050877,GO:0050890,GO:0050893,GO:0050896,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0051270,GO:0051276,GO:0051301,GO:0051302,GO:0051336,GO:0051346,GO:0051457,GO:0051492,GO:0051493,GO:0051494,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051651,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051705,GO:0051716,GO:0051726,GO:0051875,GO:0051904,GO:0051905,GO:0055044,GO:0055087,GO:0060170,GO:0060249,GO:0060255,GO:0060271,GO:0060295,GO:0060296,GO:0060322,GO:0060324,GO:0060429,GO:0060491,GO:0060562,GO:0060606,GO:0060612,GO:0060613,GO:0060632,GO:0061371,GO:0061448,GO:0061512,GO:0061640,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070076,GO:0070491,GO:0070727,GO:0070887,GO:0070925,GO:0070988,GO:0071310,GO:0071345,GO:0071495,GO:0071539,GO:0071557,GO:0071704,GO:0071840,GO:0071944,GO:0072175,GO:0072359,GO:0072393,GO:0072595,GO:0072698,GO:0080090,GO:0090066,GO:0090304,GO:0090596,GO:0097458,GO:0097499,GO:0097708,GO:0097730,GO:0097731,GO:0097733,GO:0098588,GO:0098590,GO:0098791,GO:0110020,GO:0110053,GO:0120025,GO:0120031,GO:0120032,GO:0120034,GO:0120035,GO:0120036,GO:0120038,GO:1901360,GO:1901361,GO:1901564,GO:1901575,GO:1902017,GO:1902019,GO:1902115,GO:1902117,GO:1902494,GO:1902855,GO:1902903,GO:1902904,GO:1903047,GO:1903546,GO:1905508,GO:1905515,GO:1990234,GO:2000145
EggNOG free text desc.Sporangia induced Bardet-Biedl syndrome 4 protein. Source PGD
EggNOG OGs1MDB4@121069,COG0457@1,KOG1124@2759
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Hectar predicted targeting categorymitochondrion
Exons3
Model size378
Cds size378
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig149.3487.1prot_E-fasciculatus_F_contig149.3487.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig149 35646..37335 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927971.1169236-CDS-E-fasciculatus_F_contig149:35645..357901622927971.1169236-CDS-E-fasciculatus_F_contig149:35645..35790Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig149 35646..35790 -
1695995772.8369427-CDS-E-fasciculatus_F_contig149:35645..357901695995772.8369427-CDS-E-fasciculatus_F_contig149:35645..35790Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig149 35646..35790 -
1622927971.1314557-CDS-E-fasciculatus_F_contig149:36238..363721622927971.1314557-CDS-E-fasciculatus_F_contig149:36238..36372Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig149 36239..36372 -
1695995772.8477805-CDS-E-fasciculatus_F_contig149:36238..363721695995772.8477805-CDS-E-fasciculatus_F_contig149:36238..36372Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig149 36239..36372 -
1622927971.1449828-CDS-E-fasciculatus_F_contig149:37236..373351622927971.1449828-CDS-E-fasciculatus_F_contig149:37236..37335Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig149 37237..37335 -
1695995772.8560412-CDS-E-fasciculatus_F_contig149:37236..373351695995772.8560412-CDS-E-fasciculatus_F_contig149:37236..37335Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig149 37237..37335 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig149.3487.1

>prot_E-fasciculatus_F_contig149.3487.1 ID=prot_E-fasciculatus_F_contig149.3487.1|Name=mRNA_E-fasciculatus_F_contig149.3487.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=126bp
MRACARFWLVLTRVQTPNSAQLWNNIGMCFFGKGKYIAAVACLKRALYLD
PFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLNPDFAASYMYLAITLAR
LEDFDNACSAYDKVTHDQELQTSFRI
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mRNA from alignment at E-fasciculatus_F_contig149:35646..37335-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig149.3487.1 ID=mRNA_E-fasciculatus_F_contig149.3487.1|Name=mRNA_E-fasciculatus_F_contig149.3487.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1690bp|location=Sequence derived from alignment at E-fasciculatus_F_contig149:35646..37335- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCGCGCCTGTGCACGGTTTTGGCTTGTGCTTACTCGTGTCCAGACCCC
CAATTCGGCGCAGCTGTGGAACAACATCGGCATGTGCTTTTTCGGAAAGG
TATCGATCACTCAATCTCTGGGTATATGGACCTATCCATGAATTCAATAG
CATTCCCTCGACCATCACTTCGAACACTATTCTGCACACACAGTGGCGGG
GGGGGGTTGCAACCGAACAAGTTCAAGTATAGAGTAGGGAGAGAGAGACT
GCGGGTTGTGTAGTACGGAGGCGATGGAGAGACAAAAGGCAACTCGAGGG
TGTTGATGACGACATTAGGCCGGGCTGGAACCGAGTGGAGCCAACTCCAA
TTTAGGTGTGGCACAGCCGTGATGTCTAAAGATTCAAACTGGAATGGTAA
ATGACGATCCCGAACGTGCTTCTGGGTTTTGGTTTCTCGCGTGACCAAGG
AGTCGCCCCCACGTCAAATAAAGTGTTTACGAACGGCAAGAAGGCTTGAA
TGTATCTCTACATGTACCAGGGCGAGACTTGTGCTTCTTGCAGGAGTTGC
TTCGCCCGTGAGGCACCTCGTCGGCGATCTTCCAATTTCTAGAGCCCATG
AAGCACCTGTTGCAGTGTGAAAGTGTCTCCCGAGTATCTCATTCTCTCCG
AGCGTGTCTTGGCCGTCCTCTCGTGGAGGAAAGAAACCTCGATCAACGGT
GCCACAACGTTCCAAACAACCTTTCTGTTGATAGAAGTTCAACGGTTTCC
CAAAGCCTCGCTGGCCTATTTGGCCATTCTGTGTCTCCATGCCTGTCTCT
CCGTCAGTTAGGACACGAATTCCATGTGTTTACTTTGTGTCCACCTCTCA
ACTGGTGTTTTTCAACCCTTCCCGTCACCGCTAGCACAATGGGGTGAAGT
CTTCCTTCCTGCTCGTAATCCAACGCACGCATGCATGCGAACGTCCGCTT
TGACCGAAACAAGGGTAAGTACATCGCGGCGGTAGCATGCCTAAAGCGCG
CTCTGTACCTGGACCCGTTTGAGTGGATCGTGGCCTACAACCTGGGGCTG
GTGCACCTCAACACCTCGCAGTACGCCTCTGCCTTTCATCACTTCAGGTC
TGTTGCTAATGCCGTTAATTCCATCGTTTCTTGTCGCCGTTGCTCCCGTC
GCGGTAAAATGTCGAACTTACCTCTTGTGGCGGTATCTCGTGATCATTCT
CAGGTCATTGCACAAGGTGTACGTACTGGAATTTGTTCAAGGCACAACCA
TCACGCGCTATTCCATGAACCGTTTTGTGTCGTCATTGGAAATCTATCTT
TGCTTATTTTTCTGCCCGTCTGTCTGACTACCGGTGCCTCTCTATCCCTC
TCTCTCTATCCCCCCCTCTCTCTCTCCCTCCCTCTCCCTCCCTCTCTCTC
TATATAATGATATATATATCCCACTCTCTCCCTCCCTCTCCCTCTCTCTC
TCGCACACTCTATATCTCTCTCTCGCTCTCTCTCTCTCTCTCCCTGTCTC
TCGCTCTCTCTCGCTCTCTCCTTGTTTCTGTCAACGGACATGAAGTGCGG
CCATCAACCTCAACCCCGACTTCGCGGCGTCCTACATGTACTTGGCGATC
ACTCTGGCTAGATTGGAGGACTTCGACAACGCTTGCAGCGCCTATGACAA
GGTTACACACGACCAGGAACTGCAGACCTCCTTTAGGATA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig149:35646..37335-

>mRNA_E-fasciculatus_F_contig149.3487.1 ID=mRNA_E-fasciculatus_F_contig149.3487.1|Name=mRNA_E-fasciculatus_F_contig149.3487.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=756bp|location=Sequence derived from alignment at E-fasciculatus_F_contig149:35646..37335- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCGCGCCTGTGCACGGTTTTGGCTTGTGCTTACTCGTGTCCAGACCCC
CAATTCGGCGCAGCTGTGGAACAACATCGGCATGTGCTTTTTCGGAAAGA
TGCGCGCCTGTGCACGGTTTTGGCTTGTGCTTACTCGTGTCCAGACCCCC
AATTCGGCGCAGCTGTGGAACAACATCGGCATGTGCTTTTTCGGAAAGGG
TAAGTACATCGCGGCGGTAGCATGCCTAAAGCGCGCTCTGTACCTGGACC
CGTTTGAGTGGATCGTGGCCTACAACCTGGGGCTGGTGCACCTCAACACC
TCGCAGTACGCCTCTGCCTTTCATCACTTCAGGGTAAGTACATCGCGGCG
GTAGCATGCCTAAAGCGCGCTCTGTACCTGGACCCGTTTGAGTGGATCGT
GGCCTACAACCTGGGGCTGGTGCACCTCAACACCTCGCAGTACGCCTCTG
CCTTTCATCACTTCAGTGCGGCCATCAACCTCAACCCCGACTTCGCGGCG
TCCTACATGTACTTGGCGATCACTCTGGCTAGATTGGAGGACTTCGACAA
CGCTTGCAGCGCCTATGACAAGGTTACACACGACCAGGAACTGCAGACCT
CCTTTAGGATATGCGGCCATCAACCTCAACCCCGACTTCGCGGCGTCCTA
CATGTACTTGGCGATCACTCTGGCTAGATTGGAGGACTTCGACAACGCTT
GCAGCGCCTATGACAAGGTTACACACGACCAGGAACTGCAGACCTCCTTT
AGGATA
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