mRNA_E-fasciculatus_F_contig14894.3482.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14894.3482.1
Unique NamemRNA_E-fasciculatus_F_contig14894.3482.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig14894.3482.1 vs. uniprot
Match: D8LT67_ECTSI (Poly(A) ribonuclease subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT67_ECTSI)

HSP 1 Score: 588 bits (1517), Expect = 2.920e-206
Identity = 291/301 (96.68%), Postives = 296/301 (98.34%), Query Frame = 1
Query:    1 TKTKQAFLHRNALFFVSDFHPGAETLSERFIQRQGGLLSENLLWRLVCQLLGALRATHAAGAALRNVHPSRVLYCLVGDRVRVNWVGCLDVLEYETRKQVSELQRQDMVDLGSLILALACRHPVTAASRGESLAFTAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKIVLTSRDKRSLLVVSFADVKRCLEEAFAEVSGHAG 903
            T+ ++AFLHRNALFFVSDFHPGAETLSERFIQRQGGLLSE LLWRLVCQLLGALRATHAAGAALRNVHPSRVLYCLVGDRVRVNWVGCLDVLEYETRKQVSELQRQDMVDLGSLILALACRHPVT ASRGESLAFTAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQ HLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKI+LTSRD+RSLLVVSFADVKRCLEEAFAEVSGH G
Sbjct:  259 TRPREAFLHRNALFFVSDFHPGAETLSERFIQRQGGLLSEGLLWRLVCQLLGALRATHAAGAALRNVHPSRVLYCLVGDRVRVNWVGCLDVLEYETRKQVSELQRQDMVDLGSLILALACRHPVTVASRGESLAFTAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQGHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDRRSLLVVSFADVKRCLEEAFAEVSGHGG 559          
BLAST of mRNA_E-fasciculatus_F_contig14894.3482.1 vs. uniprot
Match: A0A6H5KPZ2_9PHAE (Pan3_PK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPZ2_9PHAE)

HSP 1 Score: 566 bits (1459), Expect = 2.610e-197
Identity = 284/292 (97.26%), Postives = 287/292 (98.29%), Query Frame = 1
Query:   16 AFLHRNALFFVSDFHPGAETLSERFIQRQGGLLSENLLWRLVCQLLGALRATHAAGAALRNVHPSRVLYCLVGDRVRVNWVGCLDVLEYETRKQ--VSELQRQDMVDLGSLILALACRHPVTAASRGESLAFTAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKIVLTSRDKRSLLVVSFADVKRCLEEAFAE 885
            AFLHRNALFFVSDFHPGAETLSERFIQRQGGLLSE LLWRL+CQLL ALRATHAAGAALRNVHPSRVLYCLVGDRVRVNWVGCLDVLEYETRKQ  VSELQRQDMVDLGSLILALACRHPVTAASRGESLAF AQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGT+NERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKI+LTSRDKRSLLVVSFADVKRCLEEAFAE
Sbjct:  281 AFLHRNALFFVSDFHPGAETLSERFIQRQGGLLSEGLLWRLMCQLLSALRATHAAGAALRNVHPSRVLYCLVGDRVRVNWVGCLDVLEYETRKQARVSELQRQDMVDLGSLILALACRHPVTAASRGESLAFMAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTVNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDKRSLLVVSFADVKRCLEEAFAE 572          
BLAST of mRNA_E-fasciculatus_F_contig14894.3482.1 vs. uniprot
Match: A0A7S2K6Q0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K6Q0_9STRA)

HSP 1 Score: 279 bits (714), Expect = 1.080e-88
Identity = 143/298 (47.99%), Postives = 205/298 (68.79%), Query Frame = 1
Query:   13 QAFLHRNALFFVSDFHPGAETLSERFIQRQGG--LLSENLLWRLVCQLLGALRATHAAGAALRNVHPSRVLYCLVGDRVRVNWVGCLDVLEYETRKQVSELQRQDMVDLGSLILALACRHPVTAASRGESLA----FTAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKIVLTSRDKRSLLVVSFADVKRCLEEAFAEV 888
            + F+ + ALFFV ++ PG +TL E+++   G   LL E LLW    QL+ A+R  HA   A R + P+ +L    G R+R++ VG  D LE+E RK ++E+QR+DMV LG +IL+LA R  +T ++  E+L     F AQHY+ +LH L ++L+SK PPSV+EVC   A+HTMD ++N      A  + LA+EY++GR LRLLLKLG +NERP+ G   +W+ETG+ Y+LKLFRD++FHQ D  G P++D GHV  +L+ LDA + EKIVL SRD +++LVVS+A+V  CLE A++E+
Sbjct:   68 KCFISQRALFFVHEYQPGGKTLKEKYLDHGGKPQLLQERLLWSYTTQLVAAIRTVHANRLACRCLQPNHILRTS-GGRLRISCVGIADALEFEARKSLAEIQREDMVCLGRIILSLATRTMITPSTNEETLRACGIFLAQHYSSDLHALTSALLSK-PPSVYEVCGIMANHTMDELDNAYATCDAYSNQLAAEYESGRALRLLLKLGFVNERPEFGVNRQWAETGDCYVLKLFRDFVFHQADETGRPILDLGHVVTALNKLDASDTEKIVLASRDGKAILVVSYAEVANCLENAYSEL 363          
BLAST of mRNA_E-fasciculatus_F_contig14894.3482.1 vs. uniprot
Match: A0A7S2RBK0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBK0_9STRA)

HSP 1 Score: 258 bits (660), Expect = 2.310e-79
Identity = 132/297 (44.44%), Postives = 201/297 (67.68%), Query Frame = 1
Query:   13 QAFLHRNALFFVSDFHPGAETLSERFI-QRQGGLLSENLLWRLVCQLLGALRATHAAGAALRNVHPSRVLYCLVGDRVRVNWVGCLDVLEYETRKQVSELQRQDMVDLGSLILALACRHPVTAASRGESLAFTAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKIVLTSRDKRSLLVVSFADVKRCLEEAFAEV-SGH 897
            + F+++ ALFFV  + P A+TL ER++  RQ   + E++LW  + Q+  A+R  H AG A R + P+ +L    G R+R+  +G +DVLEY+  K V E QR+D+V LG  +L +A R  VT  +  +++   AQ Y+P +  L  SL++K PPSV E+C   A  + D + +       ++ HLA+E+ NGR+L+LL+ LG++NERP+      WSETG+RY+LKLFR+YLFHQVD +G+P +DFGH+  SL+ LDAG+ EKI+L S D+R++LVVSF ++K+C++ AFA++ +GH
Sbjct:   84 KCFVYQKALFFVHAYWPTAQTLIERYVGSRQP--VPEHVLWSYLIQITAAIRTVHGAGQACRCIGPAHILVTS-GSRIRIGGIGVIDVLEYDQVKSVVEHQREDIVSLGMTLLTVASRAIVTPQTINQAMIAIAQQYSPVMQTLLISLITK-PPSVAELCGVLASQSFDELGSVYAVADGIEHHLANEFQNGRILKLLVMLGSINERPEYRMDPRWSETGDRYMLKLFRNYLFHQVDEEGQPKVDFGHIIHSLNKLDAGDPEKILLASPDQRAILVVSFTELKQCMDRAFADLYAGH 376          
BLAST of mRNA_E-fasciculatus_F_contig14894.3482.1 vs. uniprot
Match: A0A835ZFN0_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFN0_9STRA)

HSP 1 Score: 261 bits (666), Expect = 1.270e-77
Identity = 146/304 (48.03%), Postives = 194/304 (63.82%), Query Frame = 1
Query:   10 KQAFLHRNALFFVSDFHPGAETLSERFIQRQGGLLSENLLWRLVCQLLGALRATHAAGA--ALRNVHPSRVLYCLVGDRVRVNWVGCLDVLEYETRKQVSEL----QRQDMVDLGSLILALACRHPVT--AASRGESLAFTAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNERPD-QGGV--GEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKIVLTSRDKRSLLVVSFADVKRCLEEAFAEV 888
            K+AF+++   FFV D+HP AETL++R+++R G LL E LLW + CQLL A+RA H A A  A R++ P  VL  L G RVR+NW G  + LEYE    +       +  D+  L   ++++ACR  V   A +   SL+F   +Y+PEL      L  +  P + +  V  A H  D ++ +      L SHL  EYDNGRLLRLLLKLG +NERPD Q GV  G WSETG+RY+LKLFRDY FHQVD  G   +D GH+ Q L+ LD G+ E+I+LTSRD+R++LV S+ D+KRCLEEAF E+
Sbjct:  432 KEAFMYQGCAFFVEDYHPRAETLAQRYLERPGNLLPEGLLWSIGCQLLSAVRAVHMADARMACRHISPEHVLL-LPGGRVRINWAGVHNALEYEALSTLPAAAAAGRDADIKALACTVISIACRARVAPGAPNLPGSLSFIKANYSPELWRFLYELSLRGVP-LDQALVMAAPHMADCLDASHHECDVLHSHLHGEYDNGRLLRLLLKLGAVNERPDTQRGVSGGGWSETGDRYVLKLFRDYCFHQVDETGAAHLDLGHMLQCLNKLDVGDPERILLTSRDQRNILVASYEDIKRCLEEAFNEL 733          
BLAST of mRNA_E-fasciculatus_F_contig14894.3482.1 vs. uniprot
Match: A0A7S2RA35_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RA35_9STRA)

HSP 1 Score: 258 bits (660), Expect = 3.000e-77
Identity = 132/297 (44.44%), Postives = 201/297 (67.68%), Query Frame = 1
Query:   13 QAFLHRNALFFVSDFHPGAETLSERFI-QRQGGLLSENLLWRLVCQLLGALRATHAAGAALRNVHPSRVLYCLVGDRVRVNWVGCLDVLEYETRKQVSELQRQDMVDLGSLILALACRHPVTAASRGESLAFTAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKIVLTSRDKRSLLVVSFADVKRCLEEAFAEV-SGH 897
            + F+++ ALFFV  + P A+TL ER++  RQ   + E++LW  + Q+  A+R  H AG A R + P+ +L    G R+R+  +G +DVLEY+  K V E QR+D+V LG  +L +A R  VT  +  +++   AQ Y+P +  L  SL++K PPSV E+C   A  + D + +       ++ HLA+E+ NGR+L+LL+ LG++NERP+      WSETG+RY+LKLFR+YLFHQVD +G+P +DFGH+  SL+ LDAG+ EKI+L S D+R++LVVSF ++K+C++ AFA++ +GH
Sbjct:  295 KCFVYQKALFFVHAYWPTAQTLIERYVGSRQP--VPEHVLWSYLIQITAAIRTVHGAGQACRCIGPAHILVTS-GSRIRIGGIGVIDVLEYDQVKSVVEHQREDIVSLGMTLLTVASRAIVTPQTINQAMIAIAQQYSPVMQTLLISLITK-PPSVAELCGVLASQSFDELGSVYAVADGIEHHLANEFQNGRILKLLVMLGSINERPEYRMDPRWSETGDRYMLKLFRNYLFHQVDEEGQPKVDFGHIIHSLNKLDAGDPEKILLASPDQRAILVVSFTELKQCMDRAFADLYAGH 587          
BLAST of mRNA_E-fasciculatus_F_contig14894.3482.1 vs. uniprot
Match: A0A4D9DAW6_9STRA (Protein kinase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAW6_9STRA)

HSP 1 Score: 258 bits (659), Expect = 1.360e-76
Identity = 144/312 (46.15%), Postives = 198/312 (63.46%), Query Frame = 1
Query:    4 KTKQAFL-HRNALFFVSDFHPGAETLSERFIQR-------QGGLLSENLLWRLVCQLLGALRATHAAGAALRNVHPSRVLYCLVGDRVRVNWVGCLDVLEYETRKQVSELQRQDMVDLGSLILALACRHPVTAASRGESLAFTAQHYTPELHNLAASLVSKKPP-SVFEVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNERPD--QGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKIVLTSRDKRSLLVVSFADVKRCLEEAFAEVSGHAGP 906
            K  +AF+ H NALFF+ ++HPGA+++++R++         +   L E LLW  V QL+ A+RA HAA AA R +HP+ VL    G R+R+   G +DVLE ETRK ++ELQ +D+  LG LIL LA R   T  S G +LA   Q Y+PELH L+  L SK    SVFE+    + + +D ++    A   L+ HL+ EY++GRL RL LKL  +  R +  +G    W+ETG RYILKLF+DY++HQ D  G PV+D GHV  SL+ LD+G+ EKI+L SRD  ++++VSF DVKRCLE A+ E    A P
Sbjct:  382 KLSKAFIQHGNALFFLHEYHPGAQSVTQRYVDSSRAHSGARPSRLPEKLLWSFVTQLVSAIRAVHAAQAACRMLHPNHVLVT-TGARLRLGCAGVVDVLESETRKTLAELQTEDLAMLGRLILTLATRTLPTPQSLGAALAQVRQQYSPELHALSLQLCSKPGSLSVFELVPLLSRYALDELDRQYAAADDLEGHLSHEYESGRLFRLSLKLAQVTGRAEAMEGQDPAWNETGTRYILKLFKDYVYHQEDEGGRPVLDLGHVVHSLNRLDSGDPEKILLMSRDGHTMIIVSFQDVKRCLEAAWLEYCEIANP 692          
BLAST of mRNA_E-fasciculatus_F_contig14894.3482.1 vs. uniprot
Match: A0A1W0A3K7_9STRA (Protein kinase domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A3K7_9STRA)

HSP 1 Score: 249 bits (635), Expect = 4.550e-75
Identity = 127/295 (43.05%), Postives = 195/295 (66.10%), Query Frame = 1
Query:   13 QAFLHRNALFFVSDFHPGAETLSERFIQRQGGLLSENLLWRLVCQLLGALRATHAAGAALRNVHPSRVLYCLVGDRVRVNWVGCLDVLEYETRK--QVSELQRQDMVDLGSLILALACRHPVTAASR-GESLAFTAQHYTPELHNLAASLVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKIVLTSRDKRSLLVVSFADVKRCLEEAFAEV 888
            +AF+   ALFF+S+++  A++L  +F+Q      SE  LW ++ QL GALRA H    A + V+  R+L     +RVR++  G LDVLEY+T K  +V  LQ++D+ ++G ++L++ CRH +T A+   + L   AQ Y+  L  +  SLV  +  +V  + +A   HTM+ ++N L     L+S LA EY NGR+L L+LKLG +NERP+      WSETG+RY+LKLFRDY+FHQVD +  PV+DFGH+  +L+ LD  + EKI+L+SRD  S+LV S+A+V +C++++F+++
Sbjct:  214 RAFISHGALFFLSEYYANAQSLYSKFVQGSDSA-SETFLWSVLTQLCGALRAIHGQNIACQVVNTRRLLLTS-HNRVRISGTGVLDVLEYDTSKSKRVESLQQEDIANVGKVVLSIGCRHDITPATNISDLLGQFAQSYSANLFEIVKSLVQNECTTVQSLGIAVHDHTMNELDNQLSLTDELESQLACEYQNGRMLLLMLKLGLINERPEFNMDSSWSETGDRYLLKLFRDYVFHQVDEENRPVLDFGHIIDALNKLDGSSAEKILLSSRDGNSVLVASYAEVHKCVKQSFSDL 506          
BLAST of mRNA_E-fasciculatus_F_contig14894.3482.1 vs. uniprot
Match: B7GDD9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GDD9_PHATC)

HSP 1 Score: 245 bits (626), Expect = 6.090e-74
Identity = 133/302 (44.04%), Postives = 191/302 (63.25%), Query Frame = 1
Query:   13 QAFLHRNALFFVSDFHPGAETLSERFIQRQGGLLSENLLWRLVCQLLGALRATHAAGAALRNVHPSRVLYCLVGD----RVRVNWVGCLDVLEYETRKQVSELQRQDMVDLGSLILALACRHPVTAASRGESLA----FTAQHYTPELHNLAASLV--SKKPPSVFEVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKIVLTSRDKRSLLVVSFADVKRCLEEAFAEV 888
            Q F+ + A+FFV  + PGA +L ER     GG LSE +LW  + QL+ ALR  H    A R +    +L          RVR+N +G  DVLE+E RK+V++LQR D+ DLG LIL+LA    +T ++  E++     F AQ+Y+P+LHNLA +L+  + +PPS+ +V    A    D  +    +   ++  L++EYD+ R+LR+LLKL  +NERP+ G    W+++G+ Y L LFRDY+FHQ D  G PVMD GHV  +L+ LD  +EEKIVL+SRD +SL+V S+A++ RCLE AF E+
Sbjct:  210 QCFMAQRAVFFVHQYIPGARSLKERL----GGPLSECVLWSCISQLVSALRTIHGRNLAARTLQLHHILSNTDSAASRLRVRLNCLGIADVLEFEARKKVADLQRHDVRDLGRLILSLASGTEITHSTDMETVGSCEQFLAQNYSPDLHNLAMTLIRSTPQPPSILDVSRVVAQRAFDEQDAAYQSFDRMERALSAEYDSSRMLRILLKLSYVNERPEFGPNRRWAQSGDCYALTLFRDYVFHQADGGGYPVMDLGHVISALNKLDGADEEKIVLSSRDGKSLMVASYAEIARCLENAFQEL 507          
BLAST of mRNA_E-fasciculatus_F_contig14894.3482.1 vs. uniprot
Match: F4Q1M4_CAVFA (PAN2-PAN3 deadenylation complex subunit PAN3 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q1M4_CAVFA)

HSP 1 Score: 246 bits (627), Expect = 1.100e-72
Identity = 130/302 (43.05%), Postives = 196/302 (64.90%), Query Frame = 1
Query:   19 FLHRNALFFVSDFHPGAETLSERFIQRQG--GLLSENLLWRLVCQLLGALRATHAAGAALRNVHPSRVLYCLVG-DRVRVNWVGCLDVLEYETRKQVSELQRQDMVDLGSLILALACRHPVTAASRG--ESLAFTAQHYTPELHNLAASLVSKK-----PPSVFEVCVATAHHTMDAMENTLMAN--GALQSHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKIVLTSRDKRSLLVVSFADVKRCLEEAFAEV 888
            F   +++FF  +FHPG+ETL  +++ + G  G+L+E +LW  +CQL  AL+  H+ G   R +HPS++L  L G +R+R+N VG  DV+ ++T + +++ Q +D+V  G L+L+LACR  V + +    +S+ F +  Y+ E  NL   L+SK      PP++ ++    A   +   ENT + +    L++ L  E +NGRL RL++KLG +NERP       WSETG+RY+LKLFRDY+FHQV  DG PV+DF HV  +L+ LD+G  EKI+L SRD++SLLVVS+ D+KRC + AF E+
Sbjct:  364 FGDNSSIFFTYEFHPGSETLESKYLTQNGSGGILNEAVLWSFICQLTSALKLIHSNGLVCRVIHPSKIL--LTGKNRIRINGVGIFDVVNFDTPRNLAQFQHEDLVIFGRLLLSLACRSAVASTNNNLSKSIEFISSQYSKEFKNLVIFLLSKPQPNMPPPTIDDIVSMIAPRLLQ--ENTYLHSYTDELETELTKEIENGRLFRLMVKLGYINERPSFDLDPRWSETGDRYLLKLFRDYVFHQVYDDGTPVLDFYHVIDALNKLDSGVNEKIMLMSRDEQSLLVVSYKDLKRCTDGAFGEL 661          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14894.3482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT67_ECTSI2.920e-20696.68Poly(A) ribonuclease subunit n=1 Tax=Ectocarpus si... [more]
A0A6H5KPZ2_9PHAE2.610e-19797.26Pan3_PK domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S2K6Q0_9STRA1.080e-8847.99Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2RBK0_9STRA2.310e-7944.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835ZFN0_9STRA1.270e-7748.03Protein kinase domain-containing protein n=1 Tax=T... [more]
A0A7S2RA35_9STRA3.000e-7744.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9DAW6_9STRA1.360e-7646.15Protein kinase domain-containing protein n=3 Tax=M... [more]
A0A1W0A3K7_9STRA4.550e-7543.05Protein kinase domain-containing protein (Fragment... [more]
B7GDD9_PHATC6.090e-7444.04Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
F4Q1M4_CAVFA1.100e-7243.05PAN2-PAN3 deadenylation complex subunit PAN3 n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14894contigE-fasciculatus_F_contig14894:9..3032 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score590.9
Seed ortholog evalue3.6e-166
Seed eggNOG ortholog2880.D8LT67
Preferred namePAN3
KEGG koko:K12572
KEGG Pathwayko03018,map03018
GOsGO:0000003,GO:0000288,GO:0000289,GO:0000290,GO:0000932,GO:0000956,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006402,GO:0006605,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010603,GO:0010605,GO:0010606,GO:0010629,GO:0010638,GO:0015031,GO:0015833,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0031251,GO:0031334,GO:0032991,GO:0033036,GO:0033043,GO:0034613,GO:0034641,GO:0034655,GO:0035770,GO:0036464,GO:0042886,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060255,GO:0065007,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0090304,GO:1901360,GO:1901361,GO:1901575,GO:1902115,GO:1902117,GO:1990904
EggNOG free text desc.nuclear-transcribed mRNA poly(A) tail shortening
EggNOG OGsKOG3741@1,KOG3741@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019
Hectar predicted targeting categoryother localisation
Exons5
Model size951
Cds size951
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14894.3482.1prot_E-fasciculatus_F_contig14894.3482.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14894 9..3032 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927970.309229-CDS-E-fasciculatus_F_contig14894:8..2451622927970.309229-CDS-E-fasciculatus_F_contig14894:8..245Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14894 9..245 -
1695995772.30718-CDS-E-fasciculatus_F_contig14894:8..2451695995772.30718-CDS-E-fasciculatus_F_contig14894:8..245Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14894 9..245 -
1622927970.324963-CDS-E-fasciculatus_F_contig14894:536..6811622927970.324963-CDS-E-fasciculatus_F_contig14894:536..681Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14894 537..681 -
1695995772.3202536-CDS-E-fasciculatus_F_contig14894:536..6811695995772.3202536-CDS-E-fasciculatus_F_contig14894:536..681Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14894 537..681 -
1622927970.3379703-CDS-E-fasciculatus_F_contig14894:1216..13021622927970.3379703-CDS-E-fasciculatus_F_contig14894:1216..1302Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14894 1217..1302 -
1695995772.3303478-CDS-E-fasciculatus_F_contig14894:1216..13021695995772.3303478-CDS-E-fasciculatus_F_contig14894:1216..1302Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14894 1217..1302 -
1622927970.3546925-CDS-E-fasciculatus_F_contig14894:2087..22731622927970.3546925-CDS-E-fasciculatus_F_contig14894:2087..2273Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14894 2088..2273 -
1695995772.3405225-CDS-E-fasciculatus_F_contig14894:2087..22731695995772.3405225-CDS-E-fasciculatus_F_contig14894:2087..2273Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14894 2088..2273 -
1622927970.3713794-CDS-E-fasciculatus_F_contig14894:2735..30321622927970.3713794-CDS-E-fasciculatus_F_contig14894:2735..3032Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14894 2736..3032 -
1695995772.3586216-CDS-E-fasciculatus_F_contig14894:2735..30321695995772.3586216-CDS-E-fasciculatus_F_contig14894:2735..3032Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14894 2736..3032 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14894.3482.1

>prot_E-fasciculatus_F_contig14894.3482.1 ID=prot_E-fasciculatus_F_contig14894.3482.1|Name=mRNA_E-fasciculatus_F_contig14894.3482.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=317bp
TKTKQAFLHRNALFFVSDFHPGAETLSERFIQRQGGLLSENLLWRLVCQL
LGALRATHAAGAALRNVHPSRVLYCLVGDRVRVNWVGCLDVLEYETRKQV
SELQRQDMVDLGSLILALACRHPVTAASRGESLAFTAQHYTPELHNLAAS
LVSKKPPSVFEVCVATAHHTMDAMENTLMANGALQSHLASEYDNGRLLRL
LLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDADGEPVMDFG
HVYQSLSLLDAGNEEKIVLTSRDKRSLLVVSFADVKRCLEEAFAEVSGHA
GPPPQQQQQQQQQQQQQ
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mRNA from alignment at E-fasciculatus_F_contig14894:9..3032-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14894.3482.1 ID=mRNA_E-fasciculatus_F_contig14894.3482.1|Name=mRNA_E-fasciculatus_F_contig14894.3482.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3024bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14894:9..3032- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACCAAAACAAAACAGGCGTTCCTCCATCGCAACGCTCTCTTCTTCGTGTC CGACTTCCACCCGGGGGCGGAGACCCTGTCCGAGCGGTTCATCCAGAGGC AGGGCGGGCTCCTGTCGGAGAACCTCCTGTGGCGCCTCGTGTGCCAGCTG CTGGGCGCGCTGCGGGCGACCCACGCGGCCGGGGCGGCGCTCCGCAACGT CCACCCGAGCCGCGTGCTGTACTGCCTGGTCGGGGACCGGGTGCGGGTGA ACTGGGTCGGCTGCCTGGACGTTCTAGAGTACGAGACGCGCAAGCAGGTG AAATGAAGGGGTTGTTGTTGTTGCGGGTTTGCGGGGTAGGGGTTGGGGCA GAGTGGGGCGGGATGGGACACGGGTCTGTCAATGATCGACCACGTTTGCT TACGATGAGAAAAGGGTCGTTTTTTTGTTTTTTTACTCGTTCTGGTTGTT TACGGCAACACACTCGAGGTTGTGACAAAGCTGTGGCAGTTGATTTGCGG CCGGGGTCTCTAGGTCTGGTTCGGCGCGGCGCATTTTAGCGCGTCGTCTT CACGTCTTCAGGCAGGCAGGCCGGGAGGCTCGAAGGGAAATGAATGAAGG CGATCATGTGCATATGGCGAACATATTTACAGCAGCACCGGGCACGGGTA TTACTAGTCAGACTTGCATTCGAACGTGTGCGTGATGCGATACTTTTGTC CTTGCTTTGTGTCGTCTGGCGTGCTTTGCCTGTCTTTTTGCTCCCGCGCG CTTGGGCAGGTGTCCGAGCTGCAGCGGCAGGACATGGTGGACCTGGGAAG CCTCATCCTGGCGCTGGCGTGCCGACATCCCGTCACCGCAGCCTCCCGGG GGGAATCGCTCGCCTTCACGGCGCAACACTACACGCCCGAGCTGCACAAC CTGGCGGCGTCTCTCGTATCCAAGAAGCCTCCCAGCGTTTTCGAGGTGAG AGCGGTCGGTGGTGACACAAGAAAAATATCGTATGCAGCGACTCGGCCCG ACCTACAGCAAAGAAGGCAGCACCCAATAGCGACGTCCGCATACGATGAT GGATGGGGGGAAAGGTATATAGTGTGCAGAAATCAAAACGATCTTGGTGC TGGTTCTAGGAAAATGTTTTTGTGTTTTTGTGTTTTTTTTTGCATTGTAT CTTTGAGCCATCTGTAGGGTGTGGAAACGCCGAGAGACCGGAAACACGGA GAGCCCAAAGTGCGAAATGAAATGCGCTCCTTGGTGTACTCTTCTCGCCG GTCTTGTGTGTACACGGCAGTACACCGACGGCACTGGAGTACTTCGTATG GCAAAAGTAGTGGGGTGGGGTAGACTAGTCCTACCCCTGAATCAAATCAA ACACAGCAACACGGTTGTTGTGTTGAGACAAAAAGCCTGTTTGTGATTGA GTAGAGTGAGTGGTGGTTTCGGGACGAAGAGGGCGGGAAAAGAGGAAGGG AGAGGCTGGGGCGGGGGGGCAGAAAGCAATGCCCGCTGTCTGTGGAGAGA ACAGCGAGGACCGAACGAGAACGTATTCGGTTGCCATAGCTGCCATTACG GAACATGGGCTTTCGCAGCGTTTGTTGGATGCAATTGACCGGAAGGATAT ATTTTTTTATTTTTCAAGATTTGTGCCAACATGGATGTTGATTGTGTGGC GGGGCGCAAATAACGATTCTGCTGTCGAGGGACTGCATACCTCACTGTAA CGCCCTTTGTTGTTGTTGTTGTACGGTCAGGTCTGCGTGGCAACCGCCCA TCACACGATGGACGCCATGGAGAACACGCTGATGGCTAACGGCGCGCTTC AGAGCCACTTAGCAAGGTAGGAGCGGGACGGCACAGCGAGAGAGAGAGAG AGATAAAACAGAGTGATTAAAGATTAAGGAGGACAGAGACACATGCTCGC GCGAAGAAGAACAATAAGTCAATCGTTGTGGCGTGGGTTAGCCCACACGC TTTGCGCGTTGTCCGGTAGTCGCACGTCTGGCTGGGGACTTTTGGCGGAT GGCGTGTTTTGCACAACTGGCATCTTGTTTTTTTTTGTGCAATGGGTGTT AGTATTTCGGTCATATGTGTGTGCGAAGTGCAACAGCGTGTGCGCAGCAA AAGGCAGCCACTGCCGTTCCCGTACGTGTGTGTCTCGTGGTCGCCCCATC TTTTCTCTCAATCGGCCTTCCCTGTCCTCCGTGTTGGACCTGCAACCTTA CCTCTCTTGTCCTACCACTACCCACGGCTGCCGTTTGTCCGGTGGTACGA CGCCGTCCTTGCTCCCGGCGCGCGGGGGGTTGCGGACAAAACGAATTGCT TCACATTGGTAACAAAAACAACGACCTACGATTGTGAAACACACGACACA GCGAGTACGACAACGGGCGGCTGCTGCGGCTGCTCCTTAAGCTGGGCACT CTAAACGAGCGGCCCGATCAGGGTGGGGTCGGGGAGTGGTCGGAGACCGG GGAGCGATACATCCTCAAGCTCTTCAGGGACTACCTCTTTCACCAGGTGT GGGGTTTTCGTGTGTGCGTCCGTCCGTGCTTTTAGGTCCGTTTCTGGTGC TCTCGTCGTTGGCCTTTGCGTTTGTGTGTGGTTGATTTTTTTTCGTCTGT TTGTCTTTTTGTCAAATTGGCACACCGGTTAGCGCAGTTGACGGTAGTCA TCATGACACGCACAGGTCAGACCTTCAGAATCATTTTAAAGTTTTCAACC GCACCAAGACTGACGTCTTTTTATTGGTCAGCCGGCTAAAATAGCGCGGT CGATGTTATCTAAAAACACACACACACGTACACACAGGTGGACGCCGACG GCGAGCCGGTGATGGACTTCGGGCACGTGTACCAGAGCCTGTCGCTCCTC GACGCCGGCAACGAGGAGAAGATCGTCCTCACGAGCAGGGACAAGCGCTC CCTCCTCGTCGTCTCGTTCGCGGACGTGAAGCGCTGCCTCGAGGAAGCCT TCGCCGAGGTTTCCGGCCACGCCGGCCCTCCGCCCCAGCAGCAGCAGCAG CAGCAGCAGCAGCAGCAGCAGCAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14894:9..3032-

>mRNA_E-fasciculatus_F_contig14894.3482.1 ID=mRNA_E-fasciculatus_F_contig14894.3482.1|Name=mRNA_E-fasciculatus_F_contig14894.3482.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1902bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14894:9..3032- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACCAAAACAAAACAGGCGTTCCTCCATCGCAACGCTCTCTTCTTCGTGTC
CGACTTCCACCCGGGGGCGGAGACCCTGTCCGAGCGGTTCATCCAGAGGC
AGGGCGGGCTCCTGTCGGAGAACCTCCTGTGGCGCCTCGTGTGCCAGCTG
CTGGGCGCGCTGCGGGCGACCCACGCGGCCGGGGCGGCGCTCCGCAACGT
CCACCCGAGCCGCGTGCTGTACTGCCTGGTCGGGGACCGGGTGCGGGTGA
ACTGGGTCGGCTGCCTGGACGTTCTAGAGTACGAGACGCGCAAGCAGACC
AAAACAAAACAGGCGTTCCTCCATCGCAACGCTCTCTTCTTCGTGTCCGA
CTTCCACCCGGGGGCGGAGACCCTGTCCGAGCGGTTCATCCAGAGGCAGG
GCGGGCTCCTGTCGGAGAACCTCCTGTGGCGCCTCGTGTGCCAGCTGCTG
GGCGCGCTGCGGGCGACCCACGCGGCCGGGGCGGCGCTCCGCAACGTCCA
CCCGAGCCGCGTGCTGTACTGCCTGGTCGGGGACCGGGTGCGGGTGAACT
GGGTCGGCTGCCTGGACGTTCTAGAGTACGAGACGCGCAAGCAGGTGTCC
GAGCTGCAGCGGCAGGACATGGTGGACCTGGGAAGCCTCATCCTGGCGCT
GGCGTGCCGACATCCCGTCACCGCAGCCTCCCGGGGGGAATCGCTCGCCT
TCACGGCGCAACACTACACGCCCGAGCTGCACAACCTGGCGGCGTCTCTC
GTATCCAAGAAGCCTCCCAGCGTTTTCGAGGTGTCCGAGCTGCAGCGGCA
GGACATGGTGGACCTGGGAAGCCTCATCCTGGCGCTGGCGTGCCGACATC
CCGTCACCGCAGCCTCCCGGGGGGAATCGCTCGCCTTCACGGCGCAACAC
TACACGCCCGAGCTGCACAACCTGGCGGCGTCTCTCGTATCCAAGAAGCC
TCCCAGCGTTTTCGAGGTCTGCGTGGCAACCGCCCATCACACGATGGACG
CCATGGAGAACACGCTGATGGCTAACGGCGCGCTTCAGAGCCACTTAGCA
AGGTCTGCGTGGCAACCGCCCATCACACGATGGACGCCATGGAGAACACG
CTGATGGCTAACGGCGCGCTTCAGAGCCACTTAGCAAGCGAGTACGACAA
CGGGCGGCTGCTGCGGCTGCTCCTTAAGCTGGGCACTCTAAACGAGCGGC
CCGATCAGGGTGGGGTCGGGGAGTGGTCGGAGACCGGGGAGCGATACATC
CTCAAGCTCTTCAGGGACTACCTCTTTCACCAGCGAGTACGACAACGGGC
GGCTGCTGCGGCTGCTCCTTAAGCTGGGCACTCTAAACGAGCGGCCCGAT
CAGGGTGGGGTCGGGGAGTGGTCGGAGACCGGGGAGCGATACATCCTCAA
GCTCTTCAGGGACTACCTCTTTCACCAGGTGGACGCCGACGGCGAGCCGG
TGATGGACTTCGGGCACGTGTACCAGAGCCTGTCGCTCCTCGACGCCGGC
AACGAGGAGAAGATCGTCCTCACGAGCAGGGACAAGCGCTCCCTCCTCGT
CGTCTCGTTCGCGGACGTGAAGCGCTGCCTCGAGGAAGCCTTCGCCGAGG
TTTCCGGCCACGCCGGCCCTCCGCCCCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGGTGGACGCCGACGGCGAGCCGGTGATGGACTTCGG
GCACGTGTACCAGAGCCTGTCGCTCCTCGACGCCGGCAACGAGGAGAAGA
TCGTCCTCACGAGCAGGGACAAGCGCTCCCTCCTCGTCGTCTCGTTCGCG
GACGTGAAGCGCTGCCTCGAGGAAGCCTTCGCCGAGGTTTCCGGCCACGC
CGGCCCTCCGCCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AG
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