prot_E-fasciculatus_F_contig14880.3475.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14880.3475.1
Unique Nameprot_E-fasciculatus_F_contig14880.3475.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length114
Homology
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: A0A6H5L2C7_9PHAE (Bms1-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2C7_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 9.580e-66
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0
Query:    5 QTRNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 113
            QTRNRKEFEDMGDAAQLRIRGFPQGRYVRIRF ALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR
Sbjct:  859 QTRNRKEFEDMGDAAQLRIRGFPQGRYVRIRFNALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 967          
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: A0A7S3XSS7_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSS7_HETAK)

HSP 1 Score: 138 bits (348), Expect = 1.860e-36
Identity = 62/113 (54.87%), Postives = 83/113 (73.45%), Query Frame = 0
Query:    1 VASDQTRNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 113
            +A    RNR EF   G+A +LR+ GF QG YVRI+F+ +PAEFV  F P+ PVI+GGL+  E  LA+V+ R K+HRWH + LK++DPLV S GWRRFQ+ P+++ ED N+RQR
Sbjct:   59 LADQAARNRAEFAAEGEAQRLRLEGFRQGLYVRIKFEGIPAEFVKTFNPKAPVILGGLLGHEANLALVQARVKKHRWHERVLKTHDPLVFSVGWRRFQSLPMYSIEDQNDRQR 171          
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: A0A835YHK8_9STRA (Ribosome biogenesis protein BMS1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHK8_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.340e-34
Identity = 59/101 (58.42%), Postives = 77/101 (76.24%), Query Frame = 0
Query:    7 RNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATED 107
            +NR EF + G A+++++ G  QG YVRI+ + LP+EFV NF+PE PV+VGGL + E  L +VR R KRHRWHG+ LKSNDPLV S GWRRFQ+ P++A ED
Sbjct:  750 KNRAEFAEEGVASRIQLEGHRQGCYVRIKLRGLPSEFVLNFKPERPVVVGGLASHETSLGLVRCRVKRHRWHGRVLKSNDPLVFSLGWRRFQSMPLYAMED 850          
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: A0A662XJF9_9STRA (Bms1-type G domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XJF9_9STRA)

HSP 1 Score: 133 bits (334), Expect = 8.670e-34
Identity = 60/107 (56.07%), Postives = 78/107 (72.90%), Query Frame = 0
Query:    7 RNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 113
            RN +EF D G+  +L++ GF  G YVRI F  +PAEFV  +  +NP++VGGL   EEGL +VR R K+HRWH K LK+NDPLV S GWRRFQ+ P+++ ED N+RQR
Sbjct:  879 RNAEEFGDEGEDVRLQLEGFRNGLYVRIEFSGVPAEFVRYYDAKNPIVVGGLPNIEEGLGLVRMRFKKHRWHKKILKTNDPLVFSIGWRRFQSLPLYSIEDTNDRQR 985          
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: A0A2R8Q045_DANRE (DUF663 domain-containing protein n=1 Tax=Danio rerio TaxID=7955 RepID=A0A2R8Q045_DANRE)

HSP 1 Score: 122 bits (306), Expect = 2.930e-33
Identity = 54/106 (50.94%), Postives = 73/106 (68.87%), Query Frame = 0
Query:    8 NRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 113
            NR+EFED+ D  +++  GF  G YVR+   A+P EFVTNF P  P I+GGL A+E  +  ++ R K+HRWH + LK+ DPL++S GWRRFQT P++  ED N R R
Sbjct:   33 NRQEFEDVDDEIRVQYEGFRPGMYVRVEIPAVPCEFVTNFDPHYPTILGGLGASEGNVGYLQMRLKKHRWHNRILKTRDPLILSLGWRRFQTIPLYYIEDHNGRHR 138          
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: A0A2D4CA48_PYTIN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 9 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CA48_PYTIN)

HSP 1 Score: 131 bits (330), Expect = 2.990e-33
Identity = 61/107 (57.01%), Postives = 76/107 (71.03%), Query Frame = 0
Query:    7 RNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 113
            RN +EF   G+  +L++ GF  G YVRI F  +PAEFV  F P NPVIVGGL   E+ L +VR R K+HRWH K LK+NDPLV S GWRRFQ+ P+++ ED N+RQR
Sbjct:  784 RNAQEFGQEGEDMRLQLEGFRNGLYVRIEFSGVPAEFVKYFDPRNPVIVGGLPNVEQSLGLVRMRFKKHRWHKKILKTNDPLVFSIGWRRFQSLPLYSIEDRNDRQR 890          
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: K3WTZ3_GLOUD (Bms1-type G domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTZ3_GLOUD)

HSP 1 Score: 131 bits (330), Expect = 2.990e-33
Identity = 59/107 (55.14%), Postives = 77/107 (71.96%), Query Frame = 0
Query:    7 RNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 113
            RN +EF D G+  +L++ GF  G YVRI    +PAEFV  + P+NP+IVGGL   E+ L +VR R K+HRWH K LK+NDPLV S GWRRFQ+ P+++ ED N+RQR
Sbjct:  776 RNAEEFGDEGEDTRLQLEGFRNGLYVRIEISGVPAEFVRFYDPKNPIIVGGLPNVEQNLGLVRMRFKKHRWHKKILKTNDPLVFSIGWRRFQSLPIYSIEDTNDRQR 882          
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: A0A5D6Y0T8_9STRA (Bms1-type G domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0T8_9STRA)

HSP 1 Score: 131 bits (330), Expect = 3.000e-33
Identity = 59/107 (55.14%), Postives = 77/107 (71.96%), Query Frame = 0
Query:    7 RNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 113
            RN +EF D G+ A+L++ GF  G YVR+    +PAEFV  + P  P+IVGGL + E+ L +VR R K+HRWH K LK+NDPLV S GWRRFQ+ PV++ ED N+RQR
Sbjct:  810 RNAEEFGDEGEEARLQLEGFRNGLYVRLALSGVPAEFVRFYDPRQPIIVGGLPSVEQSLGLVRMRFKKHRWHRKILKTNDPLVFSVGWRRFQSLPVYSIEDANDRQR 916          
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: A0A3M6VF87_9STRA (Bms1-type G domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VF87_9STRA)

HSP 1 Score: 131 bits (329), Expect = 4.080e-33
Identity = 59/107 (55.14%), Postives = 77/107 (71.96%), Query Frame = 0
Query:    7 RNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 113
            RN +EF + G+  +L++ GF  G YVRI F  +PAEFV  + P+NP++VGGL   E+ L +VR R K+HRWH K LK+NDPLV S GWRRFQ+ PV++ ED NER R
Sbjct:  785 RNAEEFGEEGEDMRLQLEGFRNGLYVRIEFSGVPAEFVRYYDPKNPIVVGGLPTMEDTLGLVRMRFKKHRWHRKILKTNDPLVFSIGWRRFQSLPVYSIEDTNERHR 891          
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: A0A484E2E5_BRELC (Bms1-type G domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E2E5_BRELC)

HSP 1 Score: 130 bits (328), Expect = 5.570e-33
Identity = 58/107 (54.21%), Postives = 77/107 (71.96%), Query Frame = 0
Query:    7 RNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 113
            RN +EF + G+  +L++ GF  G YVRI F  +PAEFV  + P+NP++VGGL   E+ L +VR R K+HRWH K LK+NDPLV S GWRRFQ+ P+++ ED NER R
Sbjct:  770 RNAEEFGEEGEDMRLQLEGFRNGLYVRIEFSKIPAEFVRYYDPKNPIVVGGLPTIEDSLGLVRMRFKKHRWHRKILKTNDPLVFSIGWRRFQSLPLYSIEDTNERHR 876          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2C7_9PHAE9.580e-6699.08Bms1-type G domain-containing protein n=2 Tax=Ecto... [more]
A0A7S3XSS7_HETAK1.860e-3654.87Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A835YHK8_9STRA1.340e-3458.42Ribosome biogenesis protein BMS1 n=1 Tax=Tribonema... [more]
A0A662XJF9_9STRA8.670e-3456.07Bms1-type G domain-containing protein n=2 Tax=Noth... [more]
A0A2R8Q045_DANRE2.930e-3350.94DUF663 domain-containing protein n=1 Tax=Danio rer... [more]
A0A2D4CA48_PYTIN2.990e-3357.01Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
K3WTZ3_GLOUD2.990e-3355.14Bms1-type G domain-containing protein n=1 Tax=Glob... [more]
A0A5D6Y0T8_9STRA3.000e-3355.14Bms1-type G domain-containing protein n=1 Tax=Pyth... [more]
A0A3M6VF87_9STRA4.080e-3355.14Bms1-type G domain-containing protein n=2 Tax=Pero... [more]
A0A484E2E5_BRELC5.570e-3354.21Bms1-type G domain-containing protein n=1 Tax=Brem... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007034Ribosome biogenesis protein BMS1/TSR1, C-terminalSMARTSM01362DUF663_2coord: 1..113
e-value: 1.5E-5
score: -102.0
IPR007034Ribosome biogenesis protein BMS1/TSR1, C-terminalPFAMPF04950RIBIOP_Ccoord: 22..113
e-value: 2.3E-25
score: 89.6
IPR039761Ribosome biogenesis protein Bms1/Tsr1PANTHERPTHR12858RIBOSOME BIOGENESIS PROTEINcoord: 4..113
NoneNo IPR availablePANTHERPTHR12858:SF2RIBOSOME BIOGENESIS PROTEIN BMS1 HOMOLOGcoord: 4..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14880contigE-fasciculatus_F_contig14880:2411..3123 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14880.3475.1mRNA_E-fasciculatus_F_contig14880.3475.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14880 2411..3123 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14880.3475.1 ID=prot_E-fasciculatus_F_contig14880.3475.1|Name=mRNA_E-fasciculatus_F_contig14880.3475.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=114bp
VASDQTRNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPE
NPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQ
PVFATEDPNERQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039761Bms1/Tsr1
IPR007034BMS1_TSR1_C