mRNA_E-fasciculatus_F_contig14880.3475.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: A0A6H5L2C7_9PHAE (Bms1-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2C7_9PHAE) HSP 1 Score: 224 bits (571), Expect = 9.580e-66 Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 1
Query: 13 QTRNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 339
QTRNRKEFEDMGDAAQLRIRGFPQGRYVRIRF ALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR
Sbjct: 859 QTRNRKEFEDMGDAAQLRIRGFPQGRYVRIRFNALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 967
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: A0A7S3XSS7_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSS7_HETAK) HSP 1 Score: 138 bits (348), Expect = 1.860e-36 Identity = 62/113 (54.87%), Postives = 83/113 (73.45%), Query Frame = 1
Query: 1 VASDQTRNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 339
+A RNR EF G+A +LR+ GF QG YVRI+F+ +PAEFV F P+ PVI+GGL+ E LA+V+ R K+HRWH + LK++DPLV S GWRRFQ+ P+++ ED N+RQR
Sbjct: 59 LADQAARNRAEFAAEGEAQRLRLEGFRQGLYVRIKFEGIPAEFVKTFNPKAPVILGGLLGHEANLALVQARVKKHRWHERVLKTHDPLVFSVGWRRFQSLPMYSIEDQNDRQR 171
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: A0A835YHK8_9STRA (Ribosome biogenesis protein BMS1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHK8_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.340e-34 Identity = 59/101 (58.42%), Postives = 77/101 (76.24%), Query Frame = 1
Query: 19 RNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATED 321
+NR EF + G A+++++ G QG YVRI+ + LP+EFV NF+PE PV+VGGL + E L +VR R KRHRWHG+ LKSNDPLV S GWRRFQ+ P++A ED
Sbjct: 750 KNRAEFAEEGVASRIQLEGHRQGCYVRIKLRGLPSEFVLNFKPERPVVVGGLASHETSLGLVRCRVKRHRWHGRVLKSNDPLVFSLGWRRFQSMPLYAMED 850
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: A0A662XJF9_9STRA (Bms1-type G domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XJF9_9STRA) HSP 1 Score: 133 bits (334), Expect = 8.670e-34 Identity = 60/107 (56.07%), Postives = 78/107 (72.90%), Query Frame = 1
Query: 19 RNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 339
RN +EF D G+ +L++ GF G YVRI F +PAEFV + +NP++VGGL EEGL +VR R K+HRWH K LK+NDPLV S GWRRFQ+ P+++ ED N+RQR
Sbjct: 879 RNAEEFGDEGEDVRLQLEGFRNGLYVRIEFSGVPAEFVRYYDAKNPIVVGGLPNIEEGLGLVRMRFKKHRWHKKILKTNDPLVFSIGWRRFQSLPLYSIEDTNDRQR 985
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: A0A2R8Q045_DANRE (DUF663 domain-containing protein n=1 Tax=Danio rerio TaxID=7955 RepID=A0A2R8Q045_DANRE) HSP 1 Score: 122 bits (306), Expect = 2.930e-33 Identity = 54/106 (50.94%), Postives = 73/106 (68.87%), Query Frame = 1
Query: 22 NRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 339
NR+EFED+ D +++ GF G YVR+ A+P EFVTNF P P I+GGL A+E + ++ R K+HRWH + LK+ DPL++S GWRRFQT P++ ED N R R
Sbjct: 33 NRQEFEDVDDEIRVQYEGFRPGMYVRVEIPAVPCEFVTNFDPHYPTILGGLGASEGNVGYLQMRLKKHRWHNRILKTRDPLILSLGWRRFQTIPLYYIEDHNGRHR 138
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: A0A2D4CA48_PYTIN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 9 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CA48_PYTIN) HSP 1 Score: 131 bits (330), Expect = 2.990e-33 Identity = 61/107 (57.01%), Postives = 76/107 (71.03%), Query Frame = 1
Query: 19 RNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 339
RN +EF G+ +L++ GF G YVRI F +PAEFV F P NPVIVGGL E+ L +VR R K+HRWH K LK+NDPLV S GWRRFQ+ P+++ ED N+RQR
Sbjct: 784 RNAQEFGQEGEDMRLQLEGFRNGLYVRIEFSGVPAEFVKYFDPRNPVIVGGLPNVEQSLGLVRMRFKKHRWHKKILKTNDPLVFSIGWRRFQSLPLYSIEDRNDRQR 890
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: K3WTZ3_GLOUD (Bms1-type G domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTZ3_GLOUD) HSP 1 Score: 131 bits (330), Expect = 2.990e-33 Identity = 59/107 (55.14%), Postives = 77/107 (71.96%), Query Frame = 1
Query: 19 RNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 339
RN +EF D G+ +L++ GF G YVRI +PAEFV + P+NP+IVGGL E+ L +VR R K+HRWH K LK+NDPLV S GWRRFQ+ P+++ ED N+RQR
Sbjct: 776 RNAEEFGDEGEDTRLQLEGFRNGLYVRIEISGVPAEFVRFYDPKNPIIVGGLPNVEQNLGLVRMRFKKHRWHKKILKTNDPLVFSIGWRRFQSLPIYSIEDTNDRQR 882
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: A0A5D6Y0T8_9STRA (Bms1-type G domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0T8_9STRA) HSP 1 Score: 131 bits (330), Expect = 3.000e-33 Identity = 59/107 (55.14%), Postives = 77/107 (71.96%), Query Frame = 1
Query: 19 RNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 339
RN +EF D G+ A+L++ GF G YVR+ +PAEFV + P P+IVGGL + E+ L +VR R K+HRWH K LK+NDPLV S GWRRFQ+ PV++ ED N+RQR
Sbjct: 810 RNAEEFGDEGEEARLQLEGFRNGLYVRLALSGVPAEFVRFYDPRQPIIVGGLPSVEQSLGLVRMRFKKHRWHRKILKTNDPLVFSVGWRRFQSLPVYSIEDANDRQR 916
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: A0A3M6VF87_9STRA (Bms1-type G domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VF87_9STRA) HSP 1 Score: 131 bits (329), Expect = 4.080e-33 Identity = 59/107 (55.14%), Postives = 77/107 (71.96%), Query Frame = 1
Query: 19 RNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 339
RN +EF + G+ +L++ GF G YVRI F +PAEFV + P+NP++VGGL E+ L +VR R K+HRWH K LK+NDPLV S GWRRFQ+ PV++ ED NER R
Sbjct: 785 RNAEEFGEEGEDMRLQLEGFRNGLYVRIEFSGVPAEFVRYYDPKNPIVVGGLPTMEDTLGLVRMRFKKHRWHRKILKTNDPLVFSIGWRRFQSLPVYSIEDTNERHR 891
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Match: A0A484E2E5_BRELC (Bms1-type G domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E2E5_BRELC) HSP 1 Score: 130 bits (328), Expect = 5.570e-33 Identity = 58/107 (54.21%), Postives = 77/107 (71.96%), Query Frame = 1
Query: 19 RNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPENPVIVGGLMAAEEGLAMVRTRAKRHRWHGKTLKSNDPLVVSAGWRRFQTQPVFATEDPNERQR 339
RN +EF + G+ +L++ GF G YVRI F +PAEFV + P+NP++VGGL E+ L +VR R K+HRWH K LK+NDPLV S GWRRFQ+ P+++ ED NER R
Sbjct: 770 RNAEEFGEEGEDMRLQLEGFRNGLYVRIEFSKIPAEFVRYYDPKNPIVVGGLPTIEDSLGLVRMRFKKHRWHRKILKTNDPLVFSIGWRRFQSLPLYSIEDTNERHR 876 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14880.3475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14880.3475.1 >prot_E-fasciculatus_F_contig14880.3475.1 ID=prot_E-fasciculatus_F_contig14880.3475.1|Name=mRNA_E-fasciculatus_F_contig14880.3475.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=114bp VASDQTRNRKEFEDMGDAAQLRIRGFPQGRYVRIRFKALPAEFVTNFRPEback to top mRNA from alignment at E-fasciculatus_F_contig14880:2411..3123+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14880.3475.1 ID=mRNA_E-fasciculatus_F_contig14880.3475.1|Name=mRNA_E-fasciculatus_F_contig14880.3475.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=713bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14880:2411..3123+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14880:2411..3123+ >mRNA_E-fasciculatus_F_contig14880.3475.1 ID=mRNA_E-fasciculatus_F_contig14880.3475.1|Name=mRNA_E-fasciculatus_F_contig14880.3475.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=684bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14880:2411..3123+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |