mRNA_E-fasciculatus_F_contig1488.3474.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1488.3474.1 vs. uniprot
Match: A0A6H5KZR8_9PHAE (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZR8_9PHAE) HSP 1 Score: 533 bits (1372), Expect = 7.500e-181 Identity = 270/291 (92.78%), Postives = 271/291 (93.13%), Query Frame = 1
Query: 1 MSEEKDTXXXXXXXXXXXXXXXXXATGEAAAADSSVDLAKQNEQTVEQQNAINATIKATQPKVGAKEEVDALLPEYEGNPKPGFRKGVQDLGKRYSALRRVRGDGNCFYRSFLFGYLERLLQGIKSTGDANTKAMLELSRLRQVVHDSKAALIALGYEEVALDDFWQTFLQELDALPNMEMGQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEHTVDMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDFSGQLGSITLPDTGAEAMVTLLYR 873
MSEEKDT +TGE AAADSSVDLAKQNEQTVEQQNAINATIKATQPKVGAKEEVDALLPEYEGNPKPGFRKGVQDLGKRYSALRRVRGDGNCFYRSFLFGYLERLLQGIK GDANTKAMLELSRLRQVVHDSKAALIALGYEEVALDDFWQTFLQELDALPNMEMGQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEHTVDMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDFSGQLGSITLPDTGAEAMVTLLYR
Sbjct: 1 MSEEKDTTAPPAASSAAP------STGETAAADSSVDLAKQNEQTVEQQNAINATIKATQPKVGAKEEVDALLPEYEGNPKPGFRKGVQDLGKRYSALRRVRGDGNCFYRSFLFGYLERLLQGIKGVGDANTKAMLELSRLRQVVHDSKAALIALGYEEVALDDFWQTFLQELDALPNMEMGQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEHTVDMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDFSGQLGSITLPDTGAEAMVTLLYR 285
BLAST of mRNA_E-fasciculatus_F_contig1488.3474.1 vs. uniprot
Match: A0A7S2SU36_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU36_9STRA) HSP 1 Score: 231 bits (590), Expect = 1.240e-65 Identity = 121/249 (48.59%), Postives = 156/249 (62.65%), Query Frame = 1
Query: 154 INATIKATQPKVGAKEEVDALLPEYEGNPKPGFRKGVQDLGKRYSALRRVRGDGNCFYRSFLFGYLERLLQGIKSTGDANTKAMLELSRLRQVVHDSKAALIALGYEEVALDDFWQTFLQELDALPNMEMGQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFL--------EHTVDMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDFS-GQLGSITLPDTGAEAMVTLLYR 873
I I A KVG E V L EY GNP+PGF G++ L RYSALRRVRGDGNCFYR FLFGYLE+L I+ A A E R Q SK L+++GY+E+A++ FW+ ++ L+ LP+ ++ LE F+EE G EY+VWYCR + +G++K N D FLPF+ VD+ ++C+REVEPMG+ECE +QIM LCE + V IEYLDG G+L T PD GA +TLLYR
Sbjct: 7 IERDIAAKSLKVGVPEPVQGLAGEYAGNPRPGFLPGIEYLASRYSALRRVRGDGNCFYRCFLFGYLEQL---IRQRDTAVEDAERERKRALQAARQSKDDLVSVGYDEMAIETFWEVLVEALETLPSTDLATLEKQFQEENGDAEYMVWYCRAIAAGYMKRNPDTFLPFILALDDAAGTAVVDINEYCRREVEPMGRECEAVQIMALCEAMQIGVAIEYLDGALLDQGRLSCPTFPD-GAAPQLTLLYR 251
BLAST of mRNA_E-fasciculatus_F_contig1488.3474.1 vs. uniprot
Match: W7TH65_9STRA (Ubiquitinyl hydrolase 1 n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TH65_9STRA) HSP 1 Score: 225 bits (574), Expect = 4.730e-63 Identity = 128/267 (47.94%), Postives = 164/267 (61.42%), Query Frame = 1
Query: 133 TVEQQNAINATIKATQPKVGAKEEVDALLPEYEGNPKPGFRKGVQDLGKRYSALRRVRGDGNCFYRSFLFGYLERLLQ-GIKSTGDANTKA-----------MLELSRLRQVVHDSKAALIALGYEEVALDDFWQTFLQELDALPNMEMGQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEHTV-DMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDF--SGQLGSITLPDT---GAE--AMVTLLYR 873
T+ QQ I++ I A+QP VG E LL Y+ NP+ GF +GV+DL +RY+ +RR+R DGNCFYR+FLF YL L++ GI+ K E R Q V DSKA L+ +GYEEVA+D FW+ F++EL+ALP+ + LE F E G Y+VWYCR+LTSG+LK + + + FL+ + DM DFC REVEP GKECEQ+QIM L L V+IEYLDG+ GQL LPD G E VTLLYR
Sbjct: 41 TIAQQEEIDSQIAASQPLVGPLEPPSMLLQAYKDNPEKGFVEGVEDLARRYARMRRIRRDGNCFYRAFLFAYLAGLVEEGIEDGRKGEEKEGGGGKGRKRGRKKEWERFSQTVKDSKAWLLTVGYEEVAIDIFWEVFVEELEALPHKSLSDLESTFNEPHGVASYMVWYCRLLTSGYLKKHKEEYEAFLDASYRDMDDFCVREVEPTGKECEQVQIMALVRALGVCVRIEYLDGRALPPGGQLPCHVLPDEWDGGKEEGVPVTLLYR 307
BLAST of mRNA_E-fasciculatus_F_contig1488.3474.1 vs. uniprot
Match: A0A835ZBB3_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB3_9STRA) HSP 1 Score: 207 bits (527), Expect = 7.180e-57 Identity = 125/273 (45.79%), Postives = 161/273 (58.97%), Query Frame = 1
Query: 82 EAAAADSSVDLAKQNEQTVEQQNAINATIKATQPKVGAKEEVDALLPEYEGNPKPGFRKGVQDLGKRYSALRRVRGDGNCFYRSFLFGYLERLLQGIKSTGDANTKAMLELSRLRQV-----VHDSKAALIALGYEEVALDDFWQTFLQELDALPNMEMGQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFL-EHTVDMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDFSGQLGSITLP---DTGAEAMVTLLYR 873
E A ++S+ L ++ E TV QQNAI IK QP VG AL PEY N KPGF KG++ L KRY+ LR VRGDGNCFYR+ F LE L+ ++S GDA + R V + +S L++LGYEEV+ D F L+ L+ + LE F E+ G EYI+W+CR+LTS F+K + RF FL TVD FC REVEP+G ECEQ+QI+ LCE L+ V+IEYL+G+DF G +P D EA LL+R
Sbjct: 9 EEATSESAKKL-QEYEATVAQQNAIQEEIKKAQPLVGKAVSPSALSPEYTDNVKPGFLKGIEYLSKRYARLRPVRGDGNCFYRALTFALLENLVLKLRS-GDAAAAQAAKAEAQRLVDKGKPMKESCQTLLSLGYEEVSFDMFSAELLEALEGIETTTPESLEAKFNEDGGSGEYIMWFCRLLTSAFIKSHPSRFESFLIGDTVDT--FCAREVEPLGVECEQLQIIALCEQLDIGVRIEYLNGEDFDASKGLDAVPVNMDGRQEAAAELLFR 277
BLAST of mRNA_E-fasciculatus_F_contig1488.3474.1 vs. uniprot
Match: A0A7S1ADL7_NOCSC (Ubiquitinyl hydrolase 1 n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1ADL7_NOCSC) HSP 1 Score: 196 bits (497), Expect = 7.680e-53 Identity = 118/264 (44.70%), Postives = 158/264 (59.85%), Query Frame = 1
Query: 118 KQNEQTVEQQNAINATIKATQPKVGAKEEVDALLPEYEGNPKPGFRKGVQDLGKRYSALRRVRGDGNCFYRSFLFGYLERLLQ----------GIKSTGDANTKAMLELSRLRQVVHDSKAALIALGYEEVALDDFWQTFLQELDALPNMEMGQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFL--EHTVDMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDFSGQLGSITLPDTGAEAMVTLLYR 873
+QN T +Q +I A I+ TQ +G KE + L Y+ NP FR G+ DL RYS +RRVRGDGNCFYRSFLFGYLE+LL +S + EL R+ + SK L+A+GY+E A+D FW ++ ++ALP + F EE G EY+VWYCR L++GFLK + +RF+PF+ + D+ FC EVEPM KECEQ+QI+ L E+L V+IEYLDG+ +G + PD G +TLLYR
Sbjct: 10 EQNVLTEKQVESITAQIR-TQALIGIKESPNVLDAVYQDNPLE-FRAGIADLTARYS-MRRVRGDGNCFYRSFLFGYLEQLLSQQRQHEAALAAQESAPEGEDAWCPELQRVVARLRGSKLDLVAVGYQESAIDVFWGEIVEFVEALPTHTPESILEQFNEENGGAEYMVWYCRALSAGFLKADPERFMPFILGANYGDIASFCAAEVEPMYKECEQVQIIALSEYLGVGVRIEYLDGRS-NGGASTHVFPD-GVHPQLTLLYR 268
BLAST of mRNA_E-fasciculatus_F_contig1488.3474.1 vs. uniprot
Match: A0A2D4CBL9_PYTIN (Ubiquitinyl hydrolase 1 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBL9_PYTIN) HSP 1 Score: 195 bits (495), Expect = 7.960e-53 Identity = 99/214 (46.26%), Postives = 135/214 (63.08%), Query Frame = 1
Query: 181 PKVGAKEEVDALLPEYEGNPKPGFRKGVQDLGKRYSALRRVRGDGNCFYRSFLFGYLERLLQGIKSTGDANTKAMLELSRLRQVVHDSKAALIALGYEEVALDDFWQTFLQELDALPNMEMGQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEHT---VDMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDFSGQ 813
P VG + V L E+EGN P F G+ L + Y A+RRVR DGNCF+R F+F E+L+ + DA A L L+R++ + SKA L+A+GY EVA+D FW+TF+ LDA+ +L +F E G EY+VWY R+LT+G+LK N+++F PF+E + ++ FC EVEPMGKEC+Q Q++ L E L VKIEYLDG GQ
Sbjct: 8 PLVGERAPVLELRKEFEGNAXPNFLHGITALDRHYEAMRRVRRDGNCFFRGFIFALCEQLVS--RDDADAEKAAAL-LARIQNTIRKSKAELVAIGYXEVAIDTFWETFVXYLDAMETRTHSELVXDFGTEGGESEYLVWYMRLLTAGYLKRNSEQFQPFIEGLHPGLSVEQFCAAEVEPMGKECDQPQVIALTEALQVGVKIEYLDGNAAEGQ 218
BLAST of mRNA_E-fasciculatus_F_contig1488.3474.1 vs. uniprot
Match: M4C1S8_HYAAE (Ubiquitinyl hydrolase 1 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C1S8_HYAAE) HSP 1 Score: 194 bits (494), Expect = 1.610e-52 Identity = 106/243 (43.62%), Postives = 143/243 (58.85%), Query Frame = 1
Query: 172 ATQPKVGAKEEVDALLPEYEGNPKPGFRKGVQDLGKRYSALRRVRGDGNCFYRSFLFGYLERLLQGIKSTGDANTKAMLELSRLRQVVHDSKAALIALGYEEVALDDFWQTFLQELDALPNMEMGQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEHTVDMQ---DFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDFSGQ------LGSITLPDTGAEAMVTLLYR 873
A P + + V L PEY GN F G++ L RY ALRRVRGDGNCF+RSF+F E LL S G ++ A L R++ + SK+ L+A+GY +VA+D FW+TF+ L A+ +L +F+ E G EY+VWY R+LT+G++K NA+RF PF++ Q FC EVEPMGKEC+Q QI L E L VKIEYLDG +G+ ++ + A +TLLYR
Sbjct: 13 AASPLLSDRMSVLCLKPEYVGNVNGNFMHGIESLDTRYGALRRVRGDGNCFFRSFIFTLCEHLLP---SQGAEDSNAALRC-RIQDKIQKSKSELVAIGYSDVAIDAFWETFVDYLAAMETRSYAELVQDFQTEGGEAEYLVWYMRLLTAGYMKKNAERFQPFIDGPYPGQTVAQFCATEVEPMGKECDQPQIAALTEALEVGVKIEYLDGSAGAGEPLQSYVCSTVDATERQAPVFITLLYR 251
BLAST of mRNA_E-fasciculatus_F_contig1488.3474.1 vs. uniprot
Match: A0A7S3K4Y9_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4Y9_9STRA) HSP 1 Score: 196 bits (499), Expect = 2.200e-52 Identity = 111/268 (41.42%), Postives = 159/268 (59.33%), Query Frame = 1
Query: 118 KQNEQTVEQQNAINATIKATQPKVGAKEEV-DALLPEYEGNPKPGFRKGVQDLGKRYSALRRVRGDGNCFYRSFLFGYLERL----LQGIK--------STGDANTKAMLELSRLRQVVHDSKAALIALGYEEVALDDFWQTFLQELDALPNMEMGQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEH---TVDMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDFSGQLGSITLPDTGAEAMVTLLYR 873
+Q+ T++Q N I +I +QP VG K+ + L EY NP GF G+Q L +Y A+RRVR DGNCFYR FL+ YLE L L+ K ST + + EL R+R +V +SK+ L+++GYE A+D FW+ FL+ LD +P +++ L +E G ++VW+CR L++ +K+N DRF PF+ VD+ FC+ +VEP+ ECEQ+QI+ L E L PV IEYLD SG + P++ A+ V LLYR
Sbjct: 64 EQDRLTIDQMNNILTSITDSQPMVGEKQGIASTLTEEYVNNPMKGFLNGIQILDSKYIAMRRVRKDGNCFYRGFLYRYLEALVSAQLEFTKHHTTSTEYSTTTNSEYRVPELIRIRTIVEESKSKLLSVGYEASAMDMFWEMFLELLDEVPTLDLQTLHTKMNDEKGISPHVVWFCRALSATQIKINVDRFAPFIMDEFGNVDVDQFCRTQVEPVNHECEQVQIIALTEMLQIPVAIEYLDA---SGATSCLVFPES-AQPTVKLLYR 327
BLAST of mRNA_E-fasciculatus_F_contig1488.3474.1 vs. uniprot
Match: A0A8K1CBZ9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBZ9_PYTOL) HSP 1 Score: 191 bits (484), Expect = 3.390e-51 Identity = 102/228 (44.74%), Postives = 137/228 (60.09%), Query Frame = 1
Query: 214 LLPEYEGNPKPGFRKGVQDLGKRYSALRRVRGDGNCFYRSFLFGYLERLLQGIKSTGDANTKAMLELSRLRQVVHDSKAALIALGYEEVALDDFWQTFLQELDALPNMEMGQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEHT---VDMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDFSGQLGSITLPDTGAEAM-----VTLLYR 873
L EY GN P F G++ L K Y +RRVRGDGNCF+R+F+F E+LL + A + L ++RQ SKA LIA+GY EVA+D FW+TF+ L+A+ +L +F+ E G CEY+VWY R+LT+G LK +A++F PF+E + ++ FC EVEPMGKEC+Q QI L E L VKIEYLDG + Q + T AE + +LYR
Sbjct: 31 LKAEYLGNANPNFLHGIEALNKHYEGMRRVRGDGNCFFRAFIFALCEQLLTNKEDVAAATALRLRILDKIRQ----SKAELIAIGYSEVAIDAFWETFVDYLEAMETRTHDELVQDFQTEGGECEYLVWYARLLTAGHLKRHAEQFQPFIEGLFPGLTVEQFCAAEVEPMGKECDQPQITALTEALQVRVKIEYLDGSTTAEQDLQSYICGTNAEGSEDSINIHVLYR 254
BLAST of mRNA_E-fasciculatus_F_contig1488.3474.1 vs. uniprot
Match: H3H1C1_PHYRM (Ubiquitinyl hydrolase 1 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1C1_PHYRM) HSP 1 Score: 189 bits (479), Expect = 1.300e-50 Identity = 100/224 (44.64%), Postives = 135/224 (60.27%), Query Frame = 1
Query: 214 LLPEYEGNPKPGFRKGVQDLGKRYSALRRVRGDGNCFYRSFLFGYLERLLQGIKSTGDANTKAMLELSRLRQVVHDSKAALIALGYEEVALDDFWQTFLQELDALPNMEMGQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEHTVDMQ---DFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDFSGQ-LGSITLPDTGAEAMVTLLYR 873
L EY GN F G++ L RY ALRRVRGDGNCF+R F+F ERLL A +A+ + R+++ + SK+ L+A+GY +VA+D FW+TF+ L A+ + +L +F+ E G EY+VWY R+LT+G++K NA+ + PF++ Q FC EVEPMGKEC+Q QI L E L VKIEYLDG G+ L S T +TLLYR
Sbjct: 27 LKAEYVGNANANFMHGIESLNGRYEALRRVRGDGNCFFRGFIFALCERLLPS------AGNEALRD--RIQRTIQQSKSELVAIGYSDVAIDAFWETFVDYLAAMESRSHAELVQDFQTEGGEAEYLVWYMRLLTAGYMKKNAETYQPFIDGLYPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQVGVKIEYLDGSAGPGEELQSYVCSGTEEPVAITLLYR 242 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1488.3474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1488.3474.1 >prot_E-fasciculatus_F_contig1488.3474.1 ID=prot_E-fasciculatus_F_contig1488.3474.1|Name=mRNA_E-fasciculatus_F_contig1488.3474.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=307bp MSEEKDTTTTTTTTTPPAASSAAPATGEAAAADSSVDLAKQNEQTVEQQNback to top mRNA from alignment at E-fasciculatus_F_contig1488:6977..16107+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1488.3474.1 ID=mRNA_E-fasciculatus_F_contig1488.3474.1|Name=mRNA_E-fasciculatus_F_contig1488.3474.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9131bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1488:6977..16107+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1488:6977..16107+ >mRNA_E-fasciculatus_F_contig1488.3474.1 ID=mRNA_E-fasciculatus_F_contig1488.3474.1|Name=mRNA_E-fasciculatus_F_contig1488.3474.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1842bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1488:6977..16107+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |