mRNA_E-fasciculatus_F_contig1488.3473.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1488.3473.1
Unique NamemRNA_E-fasciculatus_F_contig1488.3473.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1488.3473.1 vs. uniprot
Match: D8LU51_ECTSI (PEROXIDASE_4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU51_ECTSI)

HSP 1 Score: 379 bits (973), Expect = 1.320e-127
Identity = 188/189 (99.47%), Postives = 188/189 (99.47%), Query Frame = 1 
Query:   37 SSEDSQVQAAAPPVDYAAIKKDLEAMMEAEDASREDGTSIAGTLVRLAWHASGTYSKADGTGGSNGACMRMSPEKDWGANAGLDVARDFVVGLKAVYPEASYADIWTLAGATAISYMGGPEIAWYPGRTDSDKPTTVPDGRLPDADKGTIGGTIQHIRDIFGRMGFTDREMVALIGAHAVGRCHTEASG 603
            SSEDSQVQAAAPPVDYAAIKKDLEAMMEAEDASREDGTSIAGTLVRLAWHASGTYSKADGTGGSNGACMRMSPEKDWGANAGLDVARDFVVGLKAVYPEASYADIWTLAGATAISYMGGPEI WYPGRTDSDKPTTVPDGRLPDADKGTIGGTIQHIRDIFGRMGFTDREMVALIGAHAVGRCHTEASG
Sbjct:   65 SSEDSQVQAAAPPVDYAAIKKDLEAMMEAEDASREDGTSIAGTLVRLAWHASGTYSKADGTGGSNGACMRMSPEKDWGANAGLDVARDFVVGLKAVYPEASYADIWTLAGATAISYMGGPEITWYPGRTDSDKPTTVPDGRLPDADKGTIGGTIQHIRDIFGRMGFTDREMVALIGAHAVGRCHTEASG 253
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1488.3473.1 vs. uniprot
Match: A0A836CN41_9STRA (Heme peroxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN41_9STRA)

HSP 1 Score: 263 bits (672), Expect = 2.840e-82
Identity = 132/185 (71.35%), Postives = 147/185 (79.46%), Query Frame = 1 
Query:   49 SQVQAAAPPVDYAAIKKDLEAMMEAEDASREDGTSIAGTLVRLAWHASGTYSKADGTGGSNGACMRMSPEKDWGANAGLDVARDFVVGLKAVYPEASYADIWTLAGATAISYMGGPEIAWYPGRTDSDKPTTVPDGRLPDADKGTIGGTIQHIRDIFGRMGFTDREMVALIGAHAVGRCHTEASG 603
            S V AAA P+DYAA+KKD+  ++EA+ A R DGTS+AGTLVRLAWHASGTY K+ G GGS GA MR  PEK WGANAGL  AR  +  +KA YP  SYAD+WTLAG+ AI  MGGP I W PGR DS KPTTVPDGRLPDADK  IG TI HIR +FGRMGF+DREMVALIGAHAVGRCHT+ASG
Sbjct:   56 SAVPAAAVPIDYAAVKKDIAQVIEADAAKRGDGTSLAGTLVRLAWHASGTYCKSAGNGGSAGATMRFEPEKSWGANAGLGPARAALEPIKAKYPGISYADLWTLAGSVAIEEMGGPSIKWRPGRLDSHKPTTVPDGRLPDADKQDIGKTIDHIRAVFGRMGFSDREMVALIGAHAVGRCHTDASG 240
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1488.3473.1 vs. uniprot
Match: A0A7S1XUV8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUV8_9STRA)

HSP 1 Score: 252 bits (643), Expect = 2.250e-78
Identity = 123/173 (71.10%), Postives = 139/173 (80.35%), Query Frame = 1 
Query:   85 AAIKKDLEAMMEAEDASREDGTSIAGTLVRLAWHASGTYSKADGTGGSNGACMRMSPEKDWGANAGLDVARDFVVGLKAVYPEASYADIWTLAGATAISYMGGPEIAWYPGRTDSDKPTTVPDGRLPDADKGTIGGTIQHIRDIFGRMGFTDREMVALIGAHAVGRCHTEASG 603
            AA+K D++A++EA++A R DGTS+AGT VRLAWHASGTYS  D TGGSNGA MR  PE  WGANAGL VARD +  LKA YP  SYAD+WTL+G  ++ YMGGP   W  GRTDS  PTTVPDGRLP+AD G  G TI HIRDIFGRMGF+DREMVALIGAHAVGRCHT+ASG
Sbjct:   37 AAVKDDIKAIIEADEAKRGDGTSLAGTFVRLAWHASGTYSVKDKTGGSNGATMRFEPESAWGANAGLGVARDALEPLKAKYPSMSYADLWTLSGVASVEYMGGPTTPWRAGRTDSGAPTTVPDGRLPNADMGQPGKTIAHIRDIFGRMGFSDREMVALIGAHAVGRCHTDASG 209
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BLAST of mRNA_E-fasciculatus_F_contig1488.3473.1 vs. uniprot
Match: A0A835ZCK3_9STRA (Heme peroxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCK3_9STRA)

HSP 1 Score: 251 bits (641), Expect = 6.690e-78
Identity = 125/181 (69.06%), Postives = 142/181 (78.45%), Query Frame = 1 
Query:   61 AAAPPVDYAAIKKDLEAMMEAEDASREDGTSIAGTLVRLAWHASGTYSKADGTGGSNGACMRMSPEKDWGANAGLDVARDFVVGLKAVYPEASYADIWTLAGATAISYMGGPEIAWYPGRTDSDKPTTVPDGRLPDADKGTIGGTIQHIRDIFGRMGFTDREMVALIGAHAVGRCHTEASG 603
            A A  VDY A+K+D++A++E +   R DGTS+AGTLVRLAWHASGTY K+   GGS GA MR  PE  WGANAGL  AR  +  +KA YP  SY D+WTLAG+ AI+ MGGP I W PGRTDSDKPT VPDG+LPDADKG IG TI HIR IFGRMGF+DREMVALIGAHAVGRCHT+ASG
Sbjct:   39 AKAQAVDYNAVKQDIKALIEQDAEQRGDGTSLAGTLVRLAWHASGTYCKSTKDGGSCGATMRFDPEASWGANAGLGAARSALEPIKAKYPGLSYGDLWTLAGSVAIAEMGGPTITWRPGRTDSDKPTKVPDGQLPDADKGDIGKTIDHIRAIFGRMGFSDREMVALIGAHAVGRCHTDASG 219
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BLAST of mRNA_E-fasciculatus_F_contig1488.3473.1 vs. uniprot
Match: A0A7S0SWF4_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWF4_9STRA)

HSP 1 Score: 249 bits (636), Expect = 3.900e-77
Identity = 122/186 (65.59%), Postives = 146/186 (78.49%), Query Frame = 1 
Query:   46 DSQVQAAAPPVDYAAIKKDLEAMMEAEDASREDGTSIAGTLVRLAWHASGTYSKADGTGGSNGACMRMSPEKDWGANAGLDVARDFVVGLKAVYPEASYADIWTLAGATAISYMGGPEIAWYPGRTDSDKPTTVPDGRLPDADKGTIGGTIQHIRDIFGRMGFTDREMVALIGAHAVGRCHTEASG 603
            D+Q ++AA  VD  A+K+D+  ++E ++  REDGTSIAGTLVRLAWHASGTYS  D TGGSNG+ MR  PE  WGANAGL +AR+F+  +K  YPE SYADIWTLAGA AI  MGGPEI W  GRTDS  PTTVPDGRLP A+KG+   T  H+R++F R+GFT+RE +ALIGAHAVGRCHT+ASG
Sbjct:   49 DNQSESAASTVDIKAVKQDIIKLIEFDNDFREDGTSIAGTLVRLAWHASGTYSNVDHTGGSNGSTMRYPPESQWGANAGLAIAREFLNPVKRKYPELSYADIWTLAGAVAIEQMGGPEIPWRSGRTDSTTPTTVPDGRLPSANKGSPDATAAHVREVFTRLGFTEREAIALIGAHAVGRCHTDASG 234
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1488.3473.1 vs. uniprot
Match: A0A482SDA4_9ARCH (PEROXIDASE_4 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDA4_9ARCH)

HSP 1 Score: 228 bits (581), Expect = 4.050e-70
Identity = 117/184 (63.59%), Postives = 136/184 (73.91%), Query Frame = 1 
Query:   61 AAAPPVDYAAIKKDLEAMMEAEDASREDGTSIAGTLVRLAWHASGTYSKADGTGGSNGACMRMSPEKDWGANAGLDVARDFVVGLKAVYPEASYADIWTLAGATAISYMGGPEIAWYPGRTDS---DKPTTVPDGRLPDADKGTIGGTIQHIRDIFGRMGFTDREMVALIGAHAVGRCHTEASG 603
            A+AP VDY  +K D+ A +EAED+ R DGTSI  TLVRLAWHA+GTYS  D TGGSNGA MR SPE DWGAN GL  ARD +  ++  +P  + AD+WTLAGATAI  MGGP + W  GRTD+   D   T+PDGRLP+A+ G    T  HIRDIFGRMGF DRE+VALIGAHA+GRCH EASG
Sbjct:   58 ASAPVVDYKKVKADIIAAIEAEDSRRSDGTSIGPTLVRLAWHAAGTYSIHDKTGGSNGASMRYSPESDWGANKGLKGARDLLEAIRQKHPGLTTADLWTLAGATAIEAMGGPVVPWRSGRTDAPPNDTKKTLPDGRLPNANMGNPAATNSHIRDIFGRMGFNDREIVALIGAHALGRCHVEASG 241
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1488.3473.1 vs. uniprot
Match: A0A7S1YJW7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YJW7_9STRA)

HSP 1 Score: 217 bits (552), Expect = 2.710e-64
Identity = 112/190 (58.95%), Postives = 137/190 (72.11%), Query Frame = 1 
Query:   37 SSEDSQVQAAAPPVDYAAIKKDLEAMMEAEDASREDGTSIAGTLVRLAWHASGTYSKADGTGGSNGACMRMSPEKDWGANAGLDVARDFVVGLKAVYPEASYADIWTLAGATAISYMGGPEIAWYPGRTD-SDKPTTVPDGRLPDADKGTIGGTIQHIRDIFGRMGFTDREMVALIGAHAVGRCHTEASG 603
            SS +  +   AP VD   ++  + ++ME +   R DGTS+AGT +RLAWH SGTYSKADGTGGSNGA MR  PE  WGANAGL VAR  +  +KA +P+ SYAD++T AG  A+   GGP+I +  GR D S   T+ PDGRLPDADKG+   T+QHIRDIF RMGFTDRE+VAL GAHA+GRCHT+ SG
Sbjct:   65 SSSNEVLAKEAPAVDLEKVRDTIVSVMEEDAEKRGDGTSLAGTFIRLAWHCSGTYSKADGTGGSNGARMRFDPEAKWGANAGLGVARSALEPVKAKHPDMSYADLYTYAGVVAVEESGGPKIPFGLGREDMSSGETSPPDGRLPDADKGSRPSTVQHIRDIFYRMGFTDREIVALSGAHAMGRCHTDRSG 254
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BLAST of mRNA_E-fasciculatus_F_contig1488.3473.1 vs. uniprot
Match: A0A7S2AZ52_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AZ52_9STRA)

HSP 1 Score: 214 bits (545), Expect = 3.350e-63
Identity = 110/184 (59.78%), Postives = 134/184 (72.83%), Query Frame = 1 
Query:   55 VQAAAPPVDYAAIKKDLEAMMEAEDASREDGTSIAGTLVRLAWHASGTYSKADGTGGSNGACMRMSPEKDWGANAGLDVARDFVVGLKAVYPEASYADIWTLAGATAISYMGGPEIAWYPGRTD-SDKPTTVPDGRLPDADKGTIGGTIQHIRDIFGRMGFTDREMVALIGAHAVGRCHTEASG 603
            V  AAP  D+ +I++D+E M++A+   R+DGTS+A TLVRLAWH SGTYS AD TGGSNG  MR +PE  WGANAGL  AR F+  LK  YP  S+AD++T AG  AI  MGGP I W PGR D +D   + PDGRLP+AD G+   T QH+RDIF RMGF D+E+VAL GAHA+GRCH +ASG
Sbjct:   64 VSEAAPANDFESIREDIENMVDADFEKRDDGTSMAPTLVRLAWHCSGTYSCADKTGGSNGCQMRFNPEAGWGANAGLSTARLFLEPLKKKYPGVSFADLYTFAGVVAIESMGGPTIPWSPGRIDHNDGTKSPPDGRLPNADMGSPVATAQHLRDIFNRMGFNDQEIVALSGAHALGRCHEDASG 247
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BLAST of mRNA_E-fasciculatus_F_contig1488.3473.1 vs. uniprot
Match: A0A7S2W102_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W102_9STRA)

HSP 1 Score: 208 bits (530), Expect = 6.620e-61
Identity = 104/175 (59.43%), Postives = 130/175 (74.29%), Query Frame = 1 
Query:   82 YAAIKKDLEAMMEAEDASREDGTSIAGTLVRLAWHASGTYSKADGTGGSNGACMRMSPEKDWGANAGLDVARDFVVGLKAVYPEASYADIWTLAGATAISYMGGPEIAWYPGRTD-SDKPTTVPDGRLPDADKGTIGGTIQHIRDIFGRMGFTDREMVALIGAHAVGRCHTEASG 603
            Y  ++K +E  ++AE A REDGTSIA T VRLAWH +GTYSKAD +GGSNG  MR +PE  WGANAGL  AR+ +  L+  +P  S AD++TLAG  A+  MGGPE+AW PGR D +D  ++ PDGRLP+AD G+   T QH+RDIF RMGF D+E+VAL GAHA+GRCH +ASG
Sbjct:   73 YGDVRKAIEDTIDAEAARREDGTSIAPTFVRLAWHCAGTYSKADNSGGSNGCRMRFNPEAGWGANAGLATARNMLDPLQKKFPGLSAADLYTLAGVVAVESMGGPEVAWRPGRVDMNDGTSSPPDGRLPNADMGSDPATAQHLRDIFYRMGFNDQEIVALSGAHALGRCHLDASG 247
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1488.3473.1 vs. uniprot
Match: A0A2V3IPX8_9FLOR (Cytochrome c peroxidase, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPX8_9FLOR)

HSP 1 Score: 206 bits (525), Expect = 2.440e-60
Identity = 107/184 (58.15%), Postives = 131/184 (71.20%), Query Frame = 1 
Query:   64 AAPPVDYAAIKKDLEAMMEA---EDASREDGTSIAGTLVRLAWHASGTYSKADGTGGSNGACMRMSPEKDWGANAGLDVARDFVVGLKAVYPEASYADIWTLAGATAISYMGGPEIAWYPGRTDS-DKPTTVPDGRLPDADKGTIGGTIQHIRDIFGRMGFTDREMVALIGAHAVGRCHTEASG 603
            AA PV+ + + K+  A + A   +    E+   +  TLVRLAWHASGTY K   TGGS+GA MR SPE D GANAGL VAR+ +  +K ++P+ +YAD+WTLAGA AI +MGGP I W PGR D+ D     PDGRLPDADKG +G TI+H+R IF R GF DREMVALIGAHA+GRCHT+ SG
Sbjct:   66 AATPVEDSVVSKEHIAAVAAAIHDLLDNEEEGDLGPTLVRLAWHASGTYDKESRTGGSDGATMRFSPESDHGANAGLHVARNALEPIKKLFPDFTYADLWTLAGAVAIEHMGGPNIVWRPGRHDAKDASECTPDGRLPDADKGQVGATIRHVRAIFNRQGFDDREMVALIGAHALGRCHTDRSG 249
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1488.3473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU51_ECTSI1.320e-12799.47PEROXIDASE_4 domain-containing protein n=2 Tax=Ect... [more]
A0A836CN41_9STRA2.840e-8271.35Heme peroxidase n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A7S1XUV8_9STRA2.250e-7871.10Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A835ZCK3_9STRA6.690e-7869.06Heme peroxidase n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A7S0SWF4_9STRA3.900e-7765.59Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A482SDA4_9ARCH4.050e-7063.59PEROXIDASE_4 domain-containing protein (Fragment) ... [more]
A0A7S1YJW7_9STRA2.710e-6458.95Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2AZ52_9STRA3.350e-6359.78Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2W102_9STRA6.620e-6159.43Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2V3IPX8_9FLOR2.440e-6058.15Cytochrome c peroxidase, mitochondrial n=1 Tax=Gra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1488contigE-fasciculatus_F_contig1488:2..3958 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score339.7
Seed ortholog evalue7.6e-91
Seed eggNOG ortholog2880.D8LU51
Preferred nameCCP1
KEGG koko:K00428
GOsGO:0000302,GO:0003674,GO:0003824,GO:0004130,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0042737,GO:0042743,GO:0042744,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070013,GO:0070887,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748
EggNOG free text desc.cytochrome-c peroxidase activity
EggNOG OGs2QR1E@2759,COG0685@1
Ec32 ortholog descriptionHaem peroxidase
Ec32 orthologEc-16_000240.1
EC1.11.1.5
COG Functional cat.E
BiGG ReactioniMM904.YKR066C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Exons5
Model size1044
Cds size504
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927968.7483606-UTR-E-fasciculatus_F_contig1488:1..4301622927968.7483606-UTR-E-fasciculatus_F_contig1488:1..430Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1488 2..430 -
1695995771.7633014-UTR-E-fasciculatus_F_contig1488:1..4301695995771.7633014-UTR-E-fasciculatus_F_contig1488:1..430Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1488 2..430 -
1622927968.811407-UTR-E-fasciculatus_F_contig1488:3331..33431622927968.811407-UTR-E-fasciculatus_F_contig1488:3331..3343Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1488 3332..3343 -
1695995771.8291614-UTR-E-fasciculatus_F_contig1488:3331..33431695995771.8291614-UTR-E-fasciculatus_F_contig1488:3331..3343Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1488 3332..3343 -
1622927968.8221714-UTR-E-fasciculatus_F_contig1488:3859..39581622927968.8221714-UTR-E-fasciculatus_F_contig1488:3859..3958Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1488 3860..3958 -
1695995771.8451295-UTR-E-fasciculatus_F_contig1488:3859..39581695995771.8451295-UTR-E-fasciculatus_F_contig1488:3859..3958Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1488 3860..3958 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927968.764321-CDS-E-fasciculatus_F_contig1488:430..5911622927968.764321-CDS-E-fasciculatus_F_contig1488:430..591Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1488 431..591 -
1695995771.7781327-CDS-E-fasciculatus_F_contig1488:430..5911695995771.7781327-CDS-E-fasciculatus_F_contig1488:430..591Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1488 431..591 -
1622927968.774645-CDS-E-fasciculatus_F_contig1488:1570..17141622927968.774645-CDS-E-fasciculatus_F_contig1488:1570..1714Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1488 1571..1714 -
1695995771.793808-CDS-E-fasciculatus_F_contig1488:1570..17141695995771.793808-CDS-E-fasciculatus_F_contig1488:1570..1714Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1488 1571..1714 -
1622927968.7851717-CDS-E-fasciculatus_F_contig1488:2704..28071622927968.7851717-CDS-E-fasciculatus_F_contig1488:2704..2807Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1488 2705..2807 -
1695995771.8043513-CDS-E-fasciculatus_F_contig1488:2704..28071695995771.8043513-CDS-E-fasciculatus_F_contig1488:2704..2807Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1488 2705..2807 -
1622927968.8001015-CDS-E-fasciculatus_F_contig1488:3235..33311622927968.8001015-CDS-E-fasciculatus_F_contig1488:3235..3331Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1488 3236..3331 -
1695995771.812469-CDS-E-fasciculatus_F_contig1488:3235..33311695995771.812469-CDS-E-fasciculatus_F_contig1488:3235..3331Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1488 3236..3331 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1488.3473.1prot_E-fasciculatus_F_contig1488.3473.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1488 431..3331 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1488.3473.1

>prot_E-fasciculatus_F_contig1488.3473.1 ID=prot_E-fasciculatus_F_contig1488.3473.1|Name=mRNA_E-fasciculatus_F_contig1488.3473.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=168bp
MMEAEDASREDGTSIAGTLVRLAWHASGTYSKADGTGGSNGACMRMSPEK
DWGANAGLDVARDFVVGLKAVYPEASYADIWTLAGATAISYMGGPEIAWY
PGRTDSDKPTTVPDGRLPDADKGTIGGTIQHIRDIFGRMGFTDREMVALI
GAHAVGRCHTEASGKLQ*
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mRNA from alignment at E-fasciculatus_F_contig1488:2..3958-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1488.3473.1 ID=mRNA_E-fasciculatus_F_contig1488.3473.1|Name=mRNA_E-fasciculatus_F_contig1488.3473.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3957bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1488:2..3958- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GCCGCTGCCGCCGCCGCCGTAGCTGCGGTGGTGTACTCCTCGGAAGACTC
GCAAGTCCAGGCTGCCGCTCCTCCCGTGGACTACGCAGCCATCAAGAAGG
TGCTTCTTGCTTCTTGTGTGTGTTTTCCTCAAGCTTTGTGCAACAACACC
CGAGCCCGTGATGTATGGTACTAGAGCAGTAGGCGTCGTGCTTGTTGTCG
AGAGAGTGGAACTTGCTTGGCTTCAGGGAATGAGTATCGACTATCTCCGA
CGCTAGGGTTGGCTCGAGGCAGGAGTTGGTGTCCTGGTGCCCTTCCATAA
GGGGGGTACGCGGGGAGAAACTCCAGGGCAGTTCAGCTACCCCACCCCCC
CCGCCCCCCCTTCGCCCTTGTTTTATGTAGGAAATTGGTGAAGGGGGCCC
GTCGGAGATAAAAGTCTGTATTCTCCACTCTAGTCGGGAGGTGGCAATCG
CAACCGTATCTTCTGCGTAACCCCCAGCCTCCAGATTTTGGCGCTCAATT
TTGGGGCTTCTATCTATGTGGTCCTGGATTGTCTCCCGTGTGCCCCCTTG
CTTGTGCTATCATGTCACATCCCTCTCGTTACACGACATGACTCTCGTCC
TATTACTATTCATAGGACCTTGAGGCGATGATGGAGGCAGAGGATGCTTC
CCGAGAGGACGGCACCTCCATCGCGGGGACCCTGGTCAGGCTCGCCTGGC
ACGCCTCCGGCACCTACTCCAAGGTAATACATACATGTATGCACCTATCG
ATGATGTTGAACTCGCGGGGGTGGGTCGGGGAGGTACGCCGTTGTGTATT
GGCCGTGACACTTTCTCCAGTAGTGCGTCGTAAATAGTACCATGCTGTTT
TACCAATTATCTAGAGGATGGGTTTCACAGAATGTGGTGCGAGGTACCAA
GGAGGCTGGTCGAGGGCGTGGCACGTGACACAATCACATTAGAACGGAAG
ACGCGGCCCCCCCCCCCCCCCCCTGTTAGTTAAAGTTTGGCTGAACTAGT
ATGCATACGGACCGAAGAAGGTACTGGGTAGAGAGATCGGAACGGTTTTT
AATGTATTACAACATCAACAACAACAATCTTGCATGCATCATGCATGTCA
ATGCCCGTTTATTCCGTCTTGCTGTTTTTCGTGTTTCGTTTCGTGCTCAA
GGCGGACGGAACGGGTGGATCGAACGGCGCTTGCATGCGCATGTCGCCGG
AGAAGGACTGGGGCGCCAACGCGGGGCTCGACGTCGCCAGGGATTTCGTC
GTAGGTGTGTATGTGTGTTTCGCTTTTCGATTCTCGCTTCACTAAACGAT
TGATTGTATCATAGGCCTGTACTTAACTCCGTAGGCGATTATTACCTTGC
ACTACAAATTGTTGTCGATTTTCGTTTTGGTACTGAAATTCGAGTGGAAG
AAAAGGTGGTGAAAAAATCACGAAAAGATGGCCTGCGGATTACAGGCCTA
GCCGATTCTCGAGCCTGCAGCAGGCGAATTCAGCCGGGCCTTTGATGCTT
GCGATGACGTGCACGTGATGTTGCAATGTGGAGAGGTGAGGTGAGTTGAG
TTGTTGCTTTGGTCATCGTTCTTGGTGTTGGTCTTGGTCTTGGTCTTGAT
GGTTTTACCGTACCGGCGATTGTGATTGTGATTGCGATTGTGCCGGTTGG
TTGTCCTGGCATCGAAACATCGAAACGTGCGCTCACCTGTGTTACCTGTT
TATTGCAATGTACTCCCATTCCGTGCCGACTCCTGACGCGGGCGAGTTAG
TCCCGTTCGTTCGTTATCAACAGCACCCATTCCTATGACACTTGTAAGTA
TCATTGGAAGGACCGTCAATCCTTTCCTTTCATTCTCTCTGGGTTTTGGG
GAGGAAATGCGACTGCAGTATCGCCACACTCTCATGTCATGCAATACAGT
ACAGTACAATGTACGCGCCGCCACGTTAAGAAGTTACACCTGGGAGGGAG
TTGAGGAATTATTTCAGGCTCAGGGTCGGAAAGAAAGAGACAGACAAGTT
TTAAGAGTTTGAGCGTACCGTAAGAGCACGTGCGCTCAGTCAAAAAAACT
GAAGTAAACCTGTAGTAGGCGCTGTTGTGTAATTCCACAAGAAGCTAGCC
TCGTGCTAAACAGGAGCTTATTTTCTTGGTTGGTGTCATGTTCTGTATCA
ACCAACCAAATCCCATTCACCCGCAAGAACAGTCACTTCCTTCTTTTCTT
CTTTTCTTCTTTTCTCCTTTTCTTCTCTTCTTCTTTTTTTCCAGGGCTGA
AGGCAGTGTACCCGGAAGCTTCGTACGCGGATATCTGGACCCTGGCGGGC
GCTACCGCGATCAGCTACATGGGGGGTCCCGAGATCGCCTGGTACCCGGG
AAGGACTGACTCGGACAAGCCCACAACCGTGCCTGACGGTGAGTCAGTCA
GTCAGTCAGTCACAGTCAGCCCTACACTGACACGAAATACAAGATACTGC
AACCACGACAAAGAGCATGCCAAAATCAGTGTGATATTTTTTCGGAAAGA
TAAAGATGTATCTCGAAGAGACGATTCGATTCCAACGTCACTAAAAAGCT
ATGTTTCGGCACCACCACTCCTTCTATTTAGGAATGACCGAGCTTTGACA
ATCGATCCAGGGGGTGTGGTATCTGATATCACCTACGGTACTACGGTACG
GTACCCACCGCACTACCTACCGTAGGAGGCGTATCTATTATATTGGATAC
AAGGTCTGTCTCCCTTCTTGACGTGGGTGTCAAGGCTAACGTGGGTGACG
CAAGAGGACATACGATATACATGTATGCCTGAATGATGGGGTGTGTATAT
TGACGGGCAAATAACTACATCGCTCGTATTCTGTACAAAATATCGAGCCA
CCTCCAGCGGGCAGCAAAAACTTGCCAGCGAAAACCCATACAATACTCTC
CATGAACGAATGAACGAGCTAAACAGAGTGTAGATGCTGGTTTTGTAGTT
GACGTAACGCGAGATATAACATCCCCTGGACCTATTTCCAAAGCTAAATT
TCTCCCCAACGAAGAGGATGTACTTTTCGGAATGCTCTCAACGAGACGCA
GCTATTTTTGTCTACGCCGTATACACATAGATAGGACAACTATTTTAACG
TATTCAACGTGTAAAGACATCTTGATTTATTATGTAGCCGGTCTGGAGAT
TCCACCCGCCTTATGCCGGGCAACCGCCTTCTTCACCACACCCCTTTAGT
CCTTCAGTCGGGGACCCCACGGCTGTACTCCCATATCATATCATATCATA
TCATATCATATCATATCATATCATATCATATCATATCGTCTCACCCCCCT
TCCCCTCGTCTCAACGTCTCAACGTGTCCATGGGACATGACAACGTTCTC
TCCTCTGGGGCTCCCAGGCCGCCTCCCCGACGCCGACAAGGGTACCATCG
GGGGTACCATCCAGCACATCCGCGACATCTTCGGACGCATGGGCTTCACC
GACCGCGAGATGGTGGCGCTGATTGGCGCACACGCCGTGGGGCGATGCCA
CACCGAAGCGTCGGGTAAGCTACAATAAGCTATTTACGCGAGACAACCAA
TGATCTATCTCGTGATGAGGGAAGTGAACTCAAGAGATTTGAACAAGTGC
ACCGCCGATACTGCTGCAGCTGCTGCTGTGACAACCCGCTCCTGTCGAAG
AAGTGCTGTATGCATGCATAGATAGGTCCATGGACGTTTTCTCGCTCACA
GCAGCGATTCGATTTGCACATCCATCTGTCTTCTGGATTGGTCGTGGGGC
TCCGTGGATGTTGCTCGCACACACTTGAATGACTTTTGGCCGCCTTCCCT
TAGTTTTCCTGGGTGGGCTACAAGGGTCCCTCGACGAACAGTCATGCACA
ACGTGGTGATGTCCCTATAAGGAAAGATTGTTGGAAGCAAGCCGACGAAT
ATCGTCGGCGTTGCTAGTCCCGAGCTGGCTTTTGTTTTTTGCACTCTGTT
TAAGGCT
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1488:2..3958-

>mRNA_E-fasciculatus_F_contig1488.3473.1 ID=mRNA_E-fasciculatus_F_contig1488.3473.1|Name=mRNA_E-fasciculatus_F_contig1488.3473.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1008bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1488:2..3958- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGATGGAGGCAGAGGATGCTTCCCGAGAGGACGGCACCTCCATCGCGGG
GACCCTGGTCAGGCTCGCCTGGCACGCCTCCGGCACCTACTCCAAGATGA
TGGAGGCAGAGGATGCTTCCCGAGAGGACGGCACCTCCATCGCGGGGACC
CTGGTCAGGCTCGCCTGGCACGCCTCCGGCACCTACTCCAAGGCGGACGG
AACGGGTGGATCGAACGGCGCTTGCATGCGCATGTCGCCGGAGAAGGACT
GGGGCGCCAACGCGGGGCTCGACGTCGCCAGGGATTTCGTCGTAGGCGGA
CGGAACGGGTGGATCGAACGGCGCTTGCATGCGCATGTCGCCGGAGAAGG
ACTGGGGCGCCAACGCGGGGCTCGACGTCGCCAGGGATTTCGTCGTAGGG
CTGAAGGCAGTGTACCCGGAAGCTTCGTACGCGGATATCTGGACCCTGGC
GGGCGCTACCGCGATCAGCTACATGGGGGGTCCCGAGATCGCCTGGTACC
CGGGAAGGACTGACTCGGACAAGCCCACAACCGTGCCTGACGGGCTGAAG
GCAGTGTACCCGGAAGCTTCGTACGCGGATATCTGGACCCTGGCGGGCGC
TACCGCGATCAGCTACATGGGGGGTCCCGAGATCGCCTGGTACCCGGGAA
GGACTGACTCGGACAAGCCCACAACCGTGCCTGACGGCCGCCTCCCCGAC
GCCGACAAGGGTACCATCGGGGGTACCATCCAGCACATCCGCGACATCTT
CGGACGCATGGGCTTCACCGACCGCGAGATGGTGGCGCTGATTGGCGCAC
ACGCCGTGGGGCGATGCCACACCGAAGCGTCGGGTAAGCTACAATAAGCC
GCCTCCCCGACGCCGACAAGGGTACCATCGGGGGTACCATCCAGCACATC
CGCGACATCTTCGGACGCATGGGCTTCACCGACCGCGAGATGGTGGCGCT
GATTGGCGCACACGCCGTGGGGCGATGCCACACCGAAGCGTCGGGTAAGC
TACAATAA
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