mRNA_E-fasciculatus_F_contig14863.3463.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14863.3463.1 vs. uniprot
Match: D7G3T7_ECTSI (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T7_ECTSI) HSP 1 Score: 341 bits (874), Expect = 3.030e-115 Identity = 158/191 (82.72%), Postives = 168/191 (87.96%), Query Frame = 1
Query: 1 RLPLRWSLGTHYVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCNKCRATSRTPFWDPAASATAAELSCDECHGGYKCSDYEPRCTYRQSYSEGSAWTATQMVDILRLGGEELLEED---EEGGGYGWPKLSFGCIRRQSGMFDKQDRMFSICFSENGGNLVLGGYDPDLLVPGASHQFTTADFTRGFFAVEV 564
R PLRWS GTH+VYAHVGTPPQRVSLIVDTGSFTLAFPCVGC+KCR SRTPFWDP ASATAAELSCDECHG Y CS++EP+CTY SY EG WTA QMVD+LRLGGEEL EED E GGY WPKLSFGCIR+QSG+FDKQDR FSICFSENGGNLVLGGYDP+LLVPGASHQ+TTA F RGFFAVEV
Sbjct: 82 RFPLRWSEGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRSRTPFWDPGASATAAELSCDECHGDYTCSEFEPKCTYSHSYREGRGWTAIQMVDVLRLGGEELSEEDGGGEGNGGYDWPKLSFGCIRKQSGLFDKQDRKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEV 272
BLAST of mRNA_E-fasciculatus_F_contig14863.3463.1 vs. uniprot
Match: A0A6H5LN99_9PHAE (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN99_9PHAE) HSP 1 Score: 335 bits (858), Expect = 8.430e-105 Identity = 162/217 (74.65%), Postives = 172/217 (79.26%), Query Frame = 1
Query: 1 RLPLRWSLGTHYVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCNKCRATSRTPFWDPAASATAAELSCDECHGGYKCSDYEPRCTYRQSYSEGSAWTATQMVDILRLGGEELLEED---EEGGGYGWPKLSFGCIRRQSGMFDKQ--------------------------DRMFSICFSENGGNLVLGGYDPDLLVPGASHQFTTADFTRGFFAVEV 564
R+PLRWS GTH+VYAHVGTPPQRVSLI+DTGSF LAFPCVGC+KCR SRTPFWDP ASATAAELSCDECHG Y CS++EPRCTYRQSYSEGSAWTATQMVD+ RLGGE L EED E GGYGWPKLSFGCIR+Q GMFDKQ DR FSICFSENGGNLVLGGYDP+LLVPGASHQ+TTA F RGFFAVEV
Sbjct: 151 RIPLRWSEGTHFVYAHVGTPPQRVSLILDTGSFMLAFPCVGCDKCRPRSRTPFWDPGASATAAELSCDECHGDYTCSEFEPRCTYRQSYSEGSAWTATQMVDVFRLGGEGLSEEDGGGEGNGGYGWPKLSFGCIRKQLGMFDKQEPDGIIGMGPNVISPAWSLTARESPQDRKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAQFARGFFAVEV 367
BLAST of mRNA_E-fasciculatus_F_contig14863.3463.1 vs. uniprot
Match: A0A6H5JRT4_9PHAE (Peptidase A1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRT4_9PHAE) HSP 1 Score: 153 bits (387), Expect = 9.900e-40 Identity = 83/217 (38.25%), Postives = 116/217 (53.46%), Query Frame = 1
Query: 7 PLRWSLGTHYVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCNKCRATSRTPFWDPAASATAAELSCDECHGGYKCSDYEPRCTYRQSYSEGSAWTATQMVDILRLGG-----EELLEEDEEGGGYGWPKLSFGCIRRQSGMFDKQ--------------------------DRMFSICFSENGGNLVLGGYDPDLLVPGASHQFTTADFTRGFFAVEV 564
PL GTH+ Y + GTPPQRVS+I+DTGS AFPC GC C + P WD + S ++ ++C++CHG ++C + RC + Q YSEGS+WTA Q+ D+L +G E + DE + FGCI Q+G+F Q +R FS+CF +NGG +VLGGYD L PG +T + + G+F V+V
Sbjct: 118 PLFPGWGTHFAYVYAGTPPQRVSVIIDTGSHFTAFPCSGCKNC-GSHTDPHWDQSKSTSSHIVTCEDCHGSFRC-QRDKRCGFSQRYSEGSSWTAYQVEDVLWVGELTLQQSEKINHDESAYAV---EFMFGCIESQTGLFKTQLADGIMGMSADSHTLVWQLAKAGKIKERTFSLCFGKNGGTMVLGGYDNRLNKPGHEMVYTPSTKSSGWFTVKV 329
BLAST of mRNA_E-fasciculatus_F_contig14863.3463.1 vs. uniprot
Match: A0A6H5LNK8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LNK8_9PHAE) HSP 1 Score: 142 bits (357), Expect = 2.570e-36 Identity = 76/202 (37.62%), Postives = 106/202 (52.48%), Query Frame = 1
Query: 7 PLRWSLGTHYVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCNKCRATSRTPFWDPAASATAAELSCDE---CHGGYKCSDYEPRCTYRQSYSEGSAWTATQMVDILRLGGEELLEEDEEGGGYGWPKLSFGCIRRQSGMFDKQ--------------------------DRMFSICFSENGGNLVLGGYDPDLLVPGASHQFT 525
PL GTH+ Y + GTPPQR S+I++TGS AFPC C C P+WDP+ S+TA ++CDE CHG Y+C + +C + Y+E S+W A Q+ D+L +G L + + +FGCI +G+F Q +R FS+CFSE GG +V+GGYDP L PG+ Q+T
Sbjct: 99 PLFRGYGTHFAYIYAGTPPQRASVIINTGSHFSAFPCSECKNC-GNHTDPYWDPSQSSTAHIVTCDETERCHGAYRCQS-DKKCVLTERYTERSSWRAKQVDDLLWVGELTLSDSQKHDDSAFSVDFTFGCIESLTGLFRTQLADGIMGLNADSRTLITQLATAGKISERKFSLCFSETGGTMVIGGYDPLLNKPGSEMQYT 298
BLAST of mRNA_E-fasciculatus_F_contig14863.3463.1 vs. uniprot
Match: A0A835ZHP7_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHP7_9STRA) HSP 1 Score: 133 bits (335), Expect = 2.380e-33 Identity = 79/213 (37.09%), Postives = 107/213 (50.23%), Query Frame = 1
Query: 4 LPLRWSLGTHYVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCNKCRATSRTPFWDPAASATAAELSCDECHGGYKCSDYEPRCTYRQSYSEGSAWTATQMVDILRLGGEELLEEDEEGGGYGWPKLSFGCIRRQSGMFDKQ--------------------------DRMFSICFSENGGNLVLGGYDPDLLVPGASHQFTTADFTRGFFAVEV 564
+PL GTH Y +VGTPPQRVS+I+DTGS AFPC GC C +WD S+TA C +CHG + C + RC + QSYSEGS+W+A Q++D L G L + + + FGCI Q+G+F+ Q FS+CF GG +VLGG +P L+ A Q+T G+F V++
Sbjct: 6 VPLIPGYGTHIAYVYVGTPPQRVSVILDTGSHFTAFPCKGCKAC-GDHTDSYWDFDLSSTATLTKCPDCHGNFNCGANQ-RCVFSQSYSEGSSWSAFQVIDKLYTGLTTLQDTPPDDAALSIDFM-FGCINSQTGLFNTQLADGIMGMSVSEFTLVWQLHQKGLLAQEKFSLCFDYGGGVMVLGGVEP--LLRTAPMQYTPNLHDEGWFTVDL 213
BLAST of mRNA_E-fasciculatus_F_contig14863.3463.1 vs. uniprot
Match: A0A835ZJF3_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJF3_9STRA) HSP 1 Score: 134 bits (337), Expect = 5.060e-33 Identity = 79/206 (38.35%), Postives = 103/206 (50.00%), Query Frame = 1
Query: 25 GTHYVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCNKCRATSRTPFWDPAASATAAELSCDECHGGYKCSDYEPRCTYRQSYSEGSAWTATQMVDILRLGGEELLEEDEEGGGYGWPKLSFGCIRRQSGMFDKQ--------------------------DRMFSICFSENGGNLVLGGYDPDLLVPGASHQFTTADFTRGFFAVEV 564
GTH Y +VGTPPQRVS+I+DTGS AFPC GC C P+WD AAS+TA +C C G + C + RC Y QSYSEGS+W A Q++D + G + +FGCI Q+G+F+ Q S+CF GG +VLGG DP L+ A QFT + G+F V++
Sbjct: 8 GTHIAYLYVGTPPQRVSVIIDTGSHLTAFPCKGCQAC-GKHTDPYWDFAASSTAKITTCAACKGTFTCGSQD-RCIYSQSYSEGSSWHAFQVLDTVFAGPASAADVAPAAAAASGVGFAFGCIDSQTGLFNTQLADGIMGMSASESTLVWTLHRAHRVPALALSLCFGTGGGAMVLGGSDP--LLHTAPMQFTPSLKRTGWFTVDL 209
BLAST of mRNA_E-fasciculatus_F_contig14863.3463.1 vs. uniprot
Match: A0A836CAB1_9STRA (Aspartic peptidase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAB1_9STRA) HSP 1 Score: 125 bits (313), Expect = 6.360e-33 Identity = 72/180 (40.00%), Postives = 95/180 (52.78%), Query Frame = 1
Query: 25 GTHYVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCNKCRATSRTPFWDPAASATAAELSCDECHGGYKCSDYEPRCTYRQSYSEGSAWTATQMVDILRLGG--EELLEEDEEGGGYGWPKLSFGCIRRQSGMFDKQDR--------------------------MFSICFSENGGNLVLGG 480
GTH Y +VGTPPQRVS+I+DTGS AFPC GC C P+WD +AS+TA SC +C G Y C+ E RC + Q Y+EGS WTA Q+ D +G ++ D++ SFGC++ Q+G+F Q FS+CFS +GG +VLGG
Sbjct: 3 GTHVAYVYVGTPPQRVSVILDTGSSNTAFPCTGCQGC-GQHEDPYWDRSASSTAQVSSCQQCVGDYTCTAAE-RCVFSQYYAEGSGWTAYQVEDTFYVGVPVQQGTAADKKHDDVSID-FSFGCVQSQTGLFVTQPEDGIMGMAMSDATLVPQLAKKGLIPHETFSLCFSYDGGYMVLGG 179
BLAST of mRNA_E-fasciculatus_F_contig14863.3463.1 vs. uniprot
Match: F0YC49_AURAN (Peptidase A1 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC49_AURAN) HSP 1 Score: 120 bits (300), Expect = 5.720e-31 Identity = 67/180 (37.22%), Postives = 87/180 (48.33%), Query Frame = 1
Query: 22 LGTHYVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCNKCRATSRTPFWDPAASATAAELSCDECHGGYKCSDYEPRCTYRQSYSEGSAWTATQMVDILRLGGEELLEE-DEEGGGYGWPKLSFGCIRRQSGMFDKQD--------------------------RMFSICFSENGGNLVLGG 480
+GTHY + +VGTPPQRVS+IVDTGS AFPC GC C P++DP S+T L C +C +C C QSY+EGS+W A QM D +GG L E+ +G + FGC ++G+F Q FS+CF GG + LGG
Sbjct: 3 IGTHYAHVYVGTPPQRVSVIVDTGSHHTAFPCSGCKSC-GKHTDPYFDPDKSSTLRRLGCSDCVAAARC--VTKTCQVSQSYTEGSSWKAVQMKDAYYVGGTSLTEKASRDGSAWIATPFVFGCQTYETGLFRTQKADGIMGMSMHAQTLVPTMRSANALGHNSFSLCFMHGGGTMALGG 179
BLAST of mRNA_E-fasciculatus_F_contig14863.3463.1 vs. uniprot
Match: A0A7S1GPG0_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GPG0_CYCTE) HSP 1 Score: 116 bits (291), Expect = 3.400e-29 Identity = 68/191 (35.60%), Postives = 99/191 (51.83%), Query Frame = 1
Query: 4 LPLRWSLGTHYVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCNKCRATSRTPFWDPAASATAAELSCDEC--HGGYKCSDYEPRCTYRQSYSEGSAWTATQMVDILRLGGEELLEEDEEGGGYGWPKLS----FGCIRRQSGMFDKQ--------------------------DRMFSICFSENGGNLVLGG 480
+PL S GTH+VYA++G+PPQR +LIVDTGS +AFPC C C + ++DP+ S T +C C G KCS++ RC Q Y+EGS+W A ++ D++ LG +E E E+ + KL+ FGC + G+F KQ F++C + +GG L +GG
Sbjct: 17 VPLHASSGTHHVYAYIGSPPQRQTLIVDTGSRLMAFPCQPCRSC-GKHVSSYYDPSFSTTDKRPTCGACLLDGVSKCSEFNDRCVISQKYTEGSSWNAYEVEDMVWLGSDEQEESFED-----YMKLAVPYPFGCQTSEKGLFRKQYADGILGLAIHETSLVSVLHDVGSIGRNAFAMCLTRHGGTLSIGG 201
BLAST of mRNA_E-fasciculatus_F_contig14863.3463.1 vs. uniprot
Match: A0A7S2WCI1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCI1_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.000e-28 Identity = 75/219 (34.25%), Postives = 109/219 (49.77%), Query Frame = 1
Query: 4 LPLRWSLGTHYVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCNKCRATSRTPFWDPAASATAAELSCDECHGGYKCSDYEPRCTYRQSYSEGSAWTATQMVDILRLGGEELLEEDEEGG-GYGWP-KLSFGCIRRQSGMFDKQD--------------------------RMFSICFSENGGNLVLGGYDPDLLVPGASHQ----FTTADFTRGFFAVEV 564
+PL +GTHY + +VGTPPQRVS+I+DTGS AFPC GC C + P + P+ S+T + L C+ C G +C + +C + QSY+EGS+W A QM D+L LGG D G+ + FGC ++G+F Q + F++CF + GG + +GG D A HQ F + G+F V++
Sbjct: 78 IPLFEGIGTHYAFIYVGTPPQRVSVIMDTGSHLTAFPCEGCKTC-GSHTDPHFKPSGSSTNSYLPCNACKAGARC--VKGKCEFGQSYTEGSSWKAHQMEDVLWLGGSSSDTHDPASSIGHALAVRFMFGCQFSETGLFRTQRADGIMGLSSSPTTLIPQVKNANLIEAKTFALCFMKGGGMMTIGGADS------AIHQEPMKFVPLAKSSGWFTVKL 287 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14863.3463.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14863.3463.1 >prot_E-fasciculatus_F_contig14863.3463.1 ID=prot_E-fasciculatus_F_contig14863.3463.1|Name=mRNA_E-fasciculatus_F_contig14863.3463.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=188bp RLPLRWSLGTHYVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCNKCRATSRback to top mRNA from alignment at E-fasciculatus_F_contig14863:162..3197- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14863.3463.1 ID=mRNA_E-fasciculatus_F_contig14863.3463.1|Name=mRNA_E-fasciculatus_F_contig14863.3463.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3036bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14863:162..3197- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14863:162..3197- >mRNA_E-fasciculatus_F_contig14863.3463.1 ID=mRNA_E-fasciculatus_F_contig14863.3463.1|Name=mRNA_E-fasciculatus_F_contig14863.3463.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1128bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14863:162..3197- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |