prot_E-fasciculatus_F_contig1486.3462.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1486.3462.1
Unique Nameprot_E-fasciculatus_F_contig1486.3462.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length1809
Homology
BLAST of mRNA_E-fasciculatus_F_contig1486.3462.1 vs. uniprot
Match: A0A6H5JUH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUH9_9PHAE)

HSP 1 Score: 1157 bits (2993), Expect = 0.000e+0
Identity = 931/1517 (61.37%), Postives = 965/1517 (63.61%), Query Frame = 0
Query:   62 FATTWHHKVTPSRRLKKHAQRGLLVERPIGETLTKAVGLVDASVAHQRRIRNLFSELEAKERTIEQMDNNGEEEVPAVVQMAWHESRTQEIRVSKKMNELRDDADCDNAIAPVRAIQQMEAYLLSGVAVLKSYMTTGARITATEILSLMSQVTFAAHTAEALSRWAGEAMETLGRERDRAHALHRENAQVSREATLAQKEIMSLEARIFHTRKELESAKAYAARIKAESGDMRAVFGAIDDSVTAAGLELVTHDASGEPLSATQAAFAMIKKLRETCISQQDHIGR----------------------------------------------LEFFVERGKLDLEQAEMTIKGMERASSSKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVSXXXXMTSSDLQSAARAPSGGRYSGTRGGSPXXXXXXXXXXXXXAATFTSTDAGQSTATXXXXA--ADSSRAGMRASPRAARAGAGADRDGTAVSVSASTTVDSYSXXXXXXXXXATDRVGGRGGRVGRRATNTETAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGNTQR---ITKPAGEKSPGKEHASAVVTKKDLVASSALGSAREDRTXXXXXXXXXXXXXXXPRGQDTANAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDADVGGGSLGEGAAGTVAPTVERANRRAVKAMRGLEDEMKNRLSSLPGLDAAAREHLHWPQYRCTCLHSVR---CSQVLSLKDTIWRDMREVAEEASATAGTESMRMMTELAKRDARITQLGSRIEDLQTRLVKINEAHEAGLGSLNKEAAAEVRSARPEHREESES--TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQHGHGTDGSTRRQGWGERDGPERDELQNHQHGGATSRDEXXXXXXXXXSTAAGRRDGGPEGGIPAAQ-----VGGVVGGVQSPSPTRTPVDGGDEKDAHWEGSTGIGLLRRGKSAGTFLLQXXXXXXXXXXXXXXXXXXXXXXXDAGKRHSRNDGVPDSPSRKNGRGLFRSPSGRTTEGEGVHFGDESSSNKFPALGGRAEEDQQTVSVLTADTSFTQNLNTGMTTPPLGQQQRVPREGGRGXXXXXRQGHRRGVDNRDSPQRQEHEPTGGSGAKGGDWVVSGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAPAASVKDMQGRARLQHMPKTVGDVVLAVAGGGVDESPEMVVTGAVAAKAAVAERDAA---------EKXXXXXXXXXXXVEGGGTGEAAAGDEADGEEDRKRQRQQRALQAFLKGADD 1508
            F   W HKVTPSRRLKKHAQRGLLVERPIGETLTKAVGLVDASVAHQRRIRNLFSELE++E+T+EQ DNNGE EVPAVVQMAWHESRTQEIRVSKKMNELRDDADCDNAIAPVRAIQQ+EAYLLSGVAVLKSYMTTGARIT TEILSLMSQVTFAAHTAEALSRWAGEAMETLGRERDRAH+LHRENAQVSREATLAQKEIMSLEA+IFHTRKELESAKAYAARIKAESGDMRAVFGAIDDSVTAAGLEL+THDASGEPLSATQAAF MIKKLRETCISQQDHIGR                                              LEFFV+RGKLDLEQAEMTIK M R SSSKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  VS    M SS   SAAR PSG  YSGTR GSP             AAT TSTDAGQS  TXXX A  ADSSRAGM+AS R  RAGAGADRDGTAVSVSA T VDSYS         ATDRVGGRG R GRRATNTETA+G                 XXXXXXXXXXXXXXXXXXXX                                                                       XX                             G TQR   I +P GE+SPG EHASAV TK+  VA  A+ SAREDRTXXXXXXXXXXXXXXX                                                                               SDAD+ GGSLGEGAAG VAPTVERANRRA++AMR LED MKNRL +LPGLD AAREHL     R       R      VL LKDTI RD+REVAEEASATA TESMRMMTELAKRDARITQLGSRIEDLQTRLV IN+AHEAGL  LN+EAAAE RSARP  REESES  T          XXXXXXXXXXX                         XXXXXXYQHG G +GS RRQGW  R  PERD L N+QHGG TSRDE   XXXXXX       DGGPEGGIP AQ     VGGV+G VQSP PTRTPVD G  KDAHWEGSTGIGLLRRGKSAGTFL Q              XXXXXXXXX             DSP+RK  RGLFR PSGR TE  G HFGD  SSN  P LGGR EEDQQTVSVLTADTSFTQ+ N G+TT PLGQQQR PR+GGRG      QGHRRGVD+R+SPQRQE+E TGG G KGGD VVSG E                XXXXXXXXXXXXXXXXXXXXXX              S APAASVKDMQGRAR+QHMPKTVGDVVLA AGGGVDESPEM V GAVA K AVAER            EK            EGGGTGEA AGDE DGEEDRKRQRQQRALQAFLKG  +
Sbjct:   10 FVYRWQHKVTPSRRLKKHAQRGLLVERPIGETLTKAVGLVDASVAHQRRIRNLFSELESREKTLEQTDNNGEGEVPAVVQMAWHESRTQEIRVSKKMNELRDDADCDNAIAPVRAIQQLEAYLLSGVAVLKSYMTTGARITVTEILSLMSQVTFAAHTAEALSRWAGEAMETLGRERDRAHSLHRENAQVSREATLAQKEIMSLEAKIFHTRKELESAKAYAARIKAESGDMRAVFGAIDDSVTAAGLELITHDASGEPLSATQAAFGMIKKLRETCISQQDHIGRWERGKERRNGGGSVLGLRWDWRPPSAAKETPFQFLTNPRTQTRTRRLEFFVKRGKLDLEQAEMTIKDMGRDSSSKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPSPTHGNKASAASI-AVSTAMFMASS--HSAARVPSGDTYSGTRAGSPSSSSYNTPTNDDDAATVTSTDAGQSITTXXXTATAADSSRAGMQASMRTPRAGAGADRDGTAVSVSACTAVDSYSNNN------ATDRVGGRGRRGGRRATNTETAIGGSDGSVPNLGRRRRTQAXXXXXXXXXXXXXXXXXXXXATSRGERHRGSVSPSSAAKGPLGYSRGGSVSSPPTGRSRRAGGESGEARQQSPPPLREEESGTGEGEENEKXXSEPPAWDDAGATKTPEEVKVEEEEGEEEVGETQRTSGIQQPTGEESPGNEHASAVATKEAGVALPAVVSAREDRTXXXXXXXXXXXXXXXXXXXXXXXXXKDRGGNGEEGEDEAPREGKGCDAAGGVAGASLIMTAVMSPEALGEGEQEQEDQRAEHDSSSSPA-----SDADIRGGSLGEGAAGMVAPTVERANRRALEAMRVLEDAMKNRLGALPGLDPAAREHLS-TALREQARDGFRGGGSECVLLLKDTIGRDVREVAEEASATAETESMRMMTELAKRDARITQLGSRIEDLQTRLVNINDAHEAGLEGLNEEAAAEARSARPGRREESESSPTVQQPPLNAQQXXXXXXXXXXXQLFFDSELELEPRGIADDTTTELDEXXXXXXYQHGDGREGSARRQGWEGRYRPERDALHNNQHGGVTSRDEHRHXXXXXXXXXXXXXDGGPEGGIPTAQFGGGNVGGVIGDVQSPPPTRTPVDSGHGKDAHWEGSTGIGLLRRGKSAGTFLAQQQQHSVSSPERGGGXXXXXXXXXXXXXXXXX---XXDSPTRKTTRGLFRYPSGRVTESGGGHFGDNRSSNNLPGLGGRVEEDQQTVSVLTADTSFTQSSNIGVTTRPLGQQQRDPRKGGRGGGRGQPQGHRRGVDDRESPQRQENEQTGGIGVKGGDCVVSGCEGGRHASPPASGGNVSEXXXXXXXXXXXXXXXXXXXXXXSPDHLGEYGGGGG-SLAPAASVKDMQGRARIQHMPKTVGDVVLAGAGGGVDESPEMAVIGAVAGKPAVAERGPLGKEAKHGGDEKGADGVRKEPEGAEGGGTGEAGAGDETDGEEDRKRQRQQRALQAFLKGVSE 1507          
BLAST of mRNA_E-fasciculatus_F_contig1486.3462.1 vs. uniprot
Match: D7G259_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G259_ECTSI)

HSP 1 Score: 630 bits (1625), Expect = 1.300e-202
Identity = 404/513 (78.75%), Postives = 416/513 (81.09%), Query Frame = 0
Query:   62 FATTWHHKVTPSRRLKKHAQRGLLVERPIGETLTKAVGLVDASVAHQRRIRNLFSELEAKERTIEQMDNNGEEEVPAVVQMAWHESRTQEIRVSKKMNELRDDADCDNAIAPVRAIQQMEAYLLSGVAVLKSYMTTGARITATEILSLMSQVTFAAHTAEALSRWAGEAMETLGRERDRAHALHRENAQVSREATLAQKEIMSLEARIFHTRKELESAKAYAARIKAESGDMRAVFGAIDDSVTAAGLELVTHDASGEPLSATQAAFAMIKKLRETCISQQDHIGRLEFFVERGKLDLEQAEMTIKGMERASSSKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVSXXXXMTSSDL---QSAARAPSGGRYSGTRGGSPXXXXXXXXXXXXXAATFTSTDAGQSTATXXXX--AADSSRAGMRASPRAARAGAGADRDGTAVSVSASTTVDSYSXXXXXXXXXATDRVGGRGGRVGRRATNTETAVG 569
            F   WHHKVTPSRRLKKHAQRGLLVERPIGETLTKAVGLVDASVAHQRRI+NLFSELE++ERT+EQMDNNGEEEVPAVVQMAWHESRTQEIRVSKKMNELRDDADCDNAIAPVRA QQ+EAYLLSGVAVLKSYMTTGARITATEILSLMSQVTFAAHTAEALSRWAGEAMETLGRERDRAHALHRENAQVSREATLAQKEIMSLEA+IFHTRKELESAKAYAARIKAESGDMR VFGAIDDSVTAAGLEL+THDASGEPLSATQAAF MIKKLRETCISQQDHIGRLEFFVERGKLDLEQAEMTIK M RASSSKRA XXXXXXXXXXXXXX               XXXXXXXXXXXX            +     T+  +    SAARA +G RYSGTR GSP             AAT            XXXX  AADSSRAGM AS R ARAGAGADRDGTA+SVSAST VDSYS         ATDRVGGR       ATNTETAVG
Sbjct:   10 FVYRWHHKVTPSRRLKKHAQRGLLVERPIGETLTKAVGLVDASVAHQRRIKNLFSELESRERTLEQMDNNGEEEVPAVVQMAWHESRTQEIRVSKKMNELRDDADCDNAIAPVRATQQLEAYLLSGVAVLKSYMTTGARITATEILSLMSQVTFAAHTAEALSRWAGEAMETLGRERDRAHALHRENAQVSREATLAQKEIMSLEAKIFHTRKELESAKAYAARIKAESGDMRVVFGAIDDSVTAAGLELMTHDASGEPLSATQAAFGMIKKLRETCISQQDHIGRLEFFVERGKLDLEQAEMTIKDMGRASSSKRARXXXXXXXXXXXXXXRGAYGFSASSAGGGSXXXXXXXXXXXXPPSPTHGNKASAASIAVSTAVSMASSHSAARALNGDRYSGTRAGSPSSSSCNTPTNDDDAATVXXXXXXXXXXXXXXXXXAADSSRAGMHASLRTARAGAGADRDGTAISVSASTAVDSYSNNN------ATDRVGGRXXXXXXXATNTETAVG 516          
BLAST of mRNA_E-fasciculatus_F_contig1486.3462.1 vs. uniprot
Match: D7G258_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G258_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 2.850e-56
Identity = 177/234 (75.64%), Postives = 186/234 (79.49%), Query Frame = 0
Query: 1283 MTTPPLGQQQRVPREGGRGXXXXXRQGHRRGVDNRDSPQRQEHEPTGGSGAKGGDWVVSGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SPAPAASVKDMQGRARLQHMPKTVGDVVLAVAGGGVDESPEMVVTGAVAAKAAVAERDAA---------EKXXXXXXXXXXXVEGGGTGEAAAGDEADGEEDRKRQRQQRALQAFLKGA 1506
            MT PPLGQQQR PREGGRG      QGHRR VD R+SPQRQE+E TGG GAKGGDWVVSGRE       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +PAPAASVKD+QGRAR+QHMPKTVGDVVLAVAGGGVDESP+M VTGAVA   AVAER A+         +K            EGGGTGEA AGDE DGEEDRKR+RQQRALQAFLKGA
Sbjct:    1 MTAPPLGQQQRDPREGGRGGEMGQTQGHRRDVDGRNSPQRQENEQTGGCGAKGGDWVVSGREGGRHASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPAPAASVKDVQGRARIQHMPKTVGDVVLAVAGGGVDESPDMAVTGAVAGNPAVAERGASGKEARHSGDKKGADGVRRESEGAEGGGTGEAGAGDETDGEEDRKRKRQQRALQAFLKGA 234          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1486.3462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JUH9_9PHAE0.000e+061.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G259_ECTSI1.300e-20278.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G258_ECTSI2.850e-5675.64Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 111..131
NoneNo IPR availableCOILSCoilCoilcoord: 248..268
NoneNo IPR availableCOILSCoilCoilcoord: 694..714
NoneNo IPR availableCOILSCoilCoilcoord: 1446..1466
NoneNo IPR availableCOILSCoilCoilcoord: 352..372
NoneNo IPR availableCOILSCoilCoilcoord: 961..981
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 1608..1630

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1486contigE-fasciculatus_F_contig1486:336..14499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1486.3462.1mRNA_E-fasciculatus_F_contig1486.3462.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1486 336..14609 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1486.3462.1 ID=prot_E-fasciculatus_F_contig1486.3462.1|Name=mRNA_E-fasciculatus_F_contig1486.3462.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1809bp
MPSTHFDVTPVTVATKFRRGLSSRNTEVLYGGGGPVAANTNGGPDNQDAV
KSLKTALAVQKFATTWHHKVTPSRRLKKHAQRGLLVERPIGETLTKAVGL
VDASVAHQRRIRNLFSELEAKERTIEQMDNNGEEEVPAVVQMAWHESRTQ
EIRVSKKMNELRDDADCDNAIAPVRAIQQMEAYLLSGVAVLKSYMTTGAR
ITATEILSLMSQVTFAAHTAEALSRWAGEAMETLGRERDRAHALHRENAQ
VSREATLAQKEIMSLEARIFHTRKELESAKAYAARIKAESGDMRAVFGAI
DDSVTAAGLELVTHDASGEPLSATQAAFAMIKKLRETCISQQDHIGRLEF
FVERGKLDLEQAEMTIKGMERASSSKRARKRAAATAAAKTKSKRGAYGSS
PSNGGSGGGSRAGGRPSSPTQGNKASSSSIGVSTTTSMTSSDLQSAARAP
SGGRYSGTRGGSPSSSSYNTATNDDDAATFTSTDAGQSTATSSSTAADSS
RAGMRASPRAARAGAGADRDGTAVSVSASTTVDSYSSNNNNNNNNATDRV
GGRGGRVGRRATNTETAVGGGGGNATNGGRRRRTQAVVAEGEGAGGESGG
GGGAASRGERHRGSVSPSSAATTPRGHSRGGSVSSPPTGSSRRAPDESGD
TRQEPPPPLREEESGTGQGEEKQQHPEPPAGDDAGVMKIPEETKAEEEEE
EEQEEEERGNTQRITKPAGEKSPGKEHASAVVTKKDLVASSALGSAREDR
TPEQQQQEQQVVVKASPRGQDTANAVEKKDGGGKGENGEEEAPRRRNDRN
AAGSVDGASPTTTGAAPPEALGEEEREQEDQGEEHDGSAEDSPPPSDADV
GGGSLGEGAAGTVAPTVERANRRAVKAMRGLEDEMKNRLSSLPGLDAAAR
EHLHWPQYRCTCLHSVRCSQVLSLKDTIWRDMREVAEEASATAGTESMRM
MTELAKRDARITQLGSRIEDLQTRLVKINEAHEAGLGSLNKEAAAEVRSA
RPEHREESESTPPVQQPPLNAQQQQQEQQQQQQHFFDPELEQEPRVVADD
TTTEWDEEQQHHHYQHGHGTDGSTRRQGWGERDGPERDELQNHQHGGATS
RDEHRHHQHAAGSTAAGRRDGGPEGGIPAAQVGGVVGGVQSPSPTRTPVD
GGDEKDAHWEGSTGIGLLRRGKSAGTFLLQQQQQQQQQQLHSVFSPERGG
GGGDAGKRHSRNDGVPDSPSRKNGRGLFRSPSGRTTEGEGVHFGDESSSN
KFPALGGRAEEDQQTVSVLTADTSFTQNLNTGMTTPPLGQQQRVPREGGR
GGGGGQRQGHRRGVDNRDSPQRQEHEPTGGSGAKGGDWVVSGREGGGHAP
PPASSGNAGEKRQRHQQEKGQQQHRHDGGAGGSPDNLGDDGGGGGGSPAP
AASVKDMQGRARLQHMPKTVGDVVLAVAGGGVDESPEMVVTGAVAAKAAV
AERDAAEKEADGVRKEPEGVEGGGTGEAAAGDEADGEEDRKRQRQQRALQ
AFLKGADDTQANLAFVALRQEPYIVEEFGYLAKQIRDLHEATNGAVPRHI
SHRELRDRFRELSARSAPLLRRVRARYRRLHARWASTLLQSLSTRGLNAG
DADISLTCSLCGYDWRNAQPRGYHRRPAFHGMKRGNTPGRVRGLPPCSYL
QDRRTRPEKKDGDGPLSKRDIAQRQGLVAPSGGGAVVVPGVFEGWKAEEG
DGSSLQVASGGRGETANTSLLSEQALLLHSLSTPNMSGVGAAGLFGGGGG
AGAFGGSGGEHGGGGESSTGPPSLLSKAGGREAEGQNGGTTGVRGSGDTL
LPPLLLPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type