mRNA_E-fasciculatus_F_contig1486.3462.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1486.3462.1 vs. uniprot
Match: A0A6H5JUH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUH9_9PHAE) HSP 1 Score: 1157 bits (2993), Expect = 0.000e+0 Identity = 931/1517 (61.37%), Postives = 965/1517 (63.61%), Query Frame = 3
Query: 294 FATTWHHKVTPSRRLKKHAQRGLLVERPIGETLTKAVGLVDASVAHQRRIRNLFSELEAKERTIEQMDNNGEEEVPAVVQMAWHESRTQEIRVSKKMNELRDDADCDNAIAPVRAIQQMEAYLLSGVAVLKSYMTTGARITATEILSLMSQVTFAAHTAEALSRWAGEAMETLGRERDRAHALHRENAQVSREATLAQKEIMSLEARIFHTRKELESAKAYAARIKAESGDMRAVFGAIDDSVTAAGLELVTHDASGEPLSATQAAFAMIKKLRETCISQQDHIGR----------------------------------------------LEFFVERGKLDLEQAEMTIKGMERASSSKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVSXXXXMTSSDLQSAARAPSGGRYSGTRGGSPXXXXXXXXXXXXXAATFTSTDAGQSTATXXXXA--ADSSRAGMRASPRAARAGAGADRDGTAVSVSASTTVDSYSXXXXXXXXXATDRVGGRGGRVGRRATNTETAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGNTQR---ITKPAGEKSPGKEHASAVVTKKDLVASSALGSAREDRTXXXXXXXXXXXXXXXPRGQDTANAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDADVGGGSLGEGAAGTVAPTVERANRRAVKAMRGLEDEMKNRLSSLPGLDAAAREHLHWPQYRCTCLHSVR---CSQVLSLKDTIWRDMREVAEEASATAGTESMRMMTELAKRDARITQLGSRIEDLQTRLVKINEAHEAGLGSLNKEAAAEVRSARPEHREESES--TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQHGHGTDGSTRRQGWGERDGPERDELQNHQHGGATSRDEXXXXXXXXXSTAAGRRDGGPEGGIPAAQ-----VGGVVGGVQSPSPTRTPVDGGDEKDAHWEGSTGIGLLRRGKSAGTFLLQXXXXXXXXXXXXXXXXXXXXXXXDAGKRHSRNDGVPDSPSRKNGRGLFRSPSGRTTEGEGVHFGDESSSNKFPALGGRAEEDQQTVSVLTADTSFTQNLNTGMTTPPLGQQQRVPREGGRGXXXXXRQGHRRGVDNRDSPQRQEHEPTGGSGAKGGDWVVSGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAPAASVKDMQGRARLQHMPKTVGDVVLAVAGGGVDESPEMVVTGAVAAKAAVAERDAA---------EKXXXXXXXXXXXVEGGGTGEAAAGDEADGEEDRKRQRQQRALQAFLKGADD 4634
F W HKVTPSRRLKKHAQRGLLVERPIGETLTKAVGLVDASVAHQRRIRNLFSELE++E+T+EQ DNNGE EVPAVVQMAWHESRTQEIRVSKKMNELRDDADCDNAIAPVRAIQQ+EAYLLSGVAVLKSYMTTGARIT TEILSLMSQVTFAAHTAEALSRWAGEAMETLGRERDRAH+LHRENAQVSREATLAQKEIMSLEA+IFHTRKELESAKAYAARIKAESGDMRAVFGAIDDSVTAAGLEL+THDASGEPLSATQAAF MIKKLRETCISQQDHIGR LEFFV+RGKLDLEQAEMTIK M R SSSKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VS M SS SAAR PSG YSGTR GSP AAT TSTDAGQS TXXX A ADSSRAGM+AS R RAGAGADRDGTAVSVSA T VDSYS ATDRVGGRG R GRRATNTETA+G XXXXXXXXXXXXXXXXXXXX XX G TQR I +P GE+SPG EHASAV TK+ VA A+ SAREDRTXXXXXXXXXXXXXXX SDAD+ GGSLGEGAAG VAPTVERANRRA++AMR LED MKNRL +LPGLD AAREHL R R VL LKDTI RD+REVAEEASATA TESMRMMTELAKRDARITQLGSRIEDLQTRLV IN+AHEAGL LN+EAAAE RSARP REESES T XXXXXXXXXXX XXXXXXYQHG G +GS RRQGW R PERD L N+QHGG TSRDE XXXXXX DGGPEGGIP AQ VGGV+G VQSP PTRTPVD G KDAHWEGSTGIGLLRRGKSAGTFL Q XXXXXXXXX DSP+RK RGLFR PSGR TE G HFGD SSN P LGGR EEDQQTVSVLTADTSFTQ+ N G+TT PLGQQQR PR+GGRG QGHRRGVD+R+SPQRQE+E TGG G KGGD VVSG E XXXXXXXXXXXXXXXXXXXXXX S APAASVKDMQGRAR+QHMPKTVGDVVLA AGGGVDESPEM V GAVA K AVAER EK EGGGTGEA AGDE DGEEDRKRQRQQRALQAFLKG +
Sbjct: 10 FVYRWQHKVTPSRRLKKHAQRGLLVERPIGETLTKAVGLVDASVAHQRRIRNLFSELESREKTLEQTDNNGEGEVPAVVQMAWHESRTQEIRVSKKMNELRDDADCDNAIAPVRAIQQLEAYLLSGVAVLKSYMTTGARITVTEILSLMSQVTFAAHTAEALSRWAGEAMETLGRERDRAHSLHRENAQVSREATLAQKEIMSLEAKIFHTRKELESAKAYAARIKAESGDMRAVFGAIDDSVTAAGLELITHDASGEPLSATQAAFGMIKKLRETCISQQDHIGRWERGKERRNGGGSVLGLRWDWRPPSAAKETPFQFLTNPRTQTRTRRLEFFVKRGKLDLEQAEMTIKDMGRDSSSKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPSPTHGNKASAASI-AVSTAMFMASS--HSAARVPSGDTYSGTRAGSPSSSSYNTPTNDDDAATVTSTDAGQSITTXXXTATAADSSRAGMQASMRTPRAGAGADRDGTAVSVSACTAVDSYSNNN------ATDRVGGRGRRGGRRATNTETAIGGSDGSVPNLGRRRRTQAXXXXXXXXXXXXXXXXXXXXATSRGERHRGSVSPSSAAKGPLGYSRGGSVSSPPTGRSRRAGGESGEARQQSPPPLREEESGTGEGEENEKXXSEPPAWDDAGATKTPEEVKVEEEEGEEEVGETQRTSGIQQPTGEESPGNEHASAVATKEAGVALPAVVSAREDRTXXXXXXXXXXXXXXXXXXXXXXXXXKDRGGNGEEGEDEAPREGKGCDAAGGVAGASLIMTAVMSPEALGEGEQEQEDQRAEHDSSSSPA-----SDADIRGGSLGEGAAGMVAPTVERANRRALEAMRVLEDAMKNRLGALPGLDPAAREHLS-TALREQARDGFRGGGSECVLLLKDTIGRDVREVAEEASATAETESMRMMTELAKRDARITQLGSRIEDLQTRLVNINDAHEAGLEGLNEEAAAEARSARPGRREESESSPTVQQPPLNAQQXXXXXXXXXXXQLFFDSELELEPRGIADDTTTELDEXXXXXXYQHGDGREGSARRQGWEGRYRPERDALHNNQHGGVTSRDEHRHXXXXXXXXXXXXXDGGPEGGIPTAQFGGGNVGGVIGDVQSPPPTRTPVDSGHGKDAHWEGSTGIGLLRRGKSAGTFLAQQQQHSVSSPERGGGXXXXXXXXXXXXXXXXX---XXDSPTRKTTRGLFRYPSGRVTESGGGHFGDNRSSNNLPGLGGRVEEDQQTVSVLTADTSFTQSSNIGVTTRPLGQQQRDPRKGGRGGGRGQPQGHRRGVDDRESPQRQENEQTGGIGVKGGDCVVSGCEGGRHASPPASGGNVSEXXXXXXXXXXXXXXXXXXXXXXSPDHLGEYGGGGG-SLAPAASVKDMQGRARIQHMPKTVGDVVLAGAGGGVDESPEMAVIGAVAGKPAVAERGPLGKEAKHGGDEKGADGVRKEPEGAEGGGTGEAGAGDETDGEEDRKRQRQQRALQAFLKGVSE 1507
BLAST of mRNA_E-fasciculatus_F_contig1486.3462.1 vs. uniprot
Match: D7G259_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G259_ECTSI) HSP 1 Score: 630 bits (1625), Expect = 2.550e-202 Identity = 404/513 (78.75%), Postives = 416/513 (81.09%), Query Frame = 3
Query: 294 FATTWHHKVTPSRRLKKHAQRGLLVERPIGETLTKAVGLVDASVAHQRRIRNLFSELEAKERTIEQMDNNGEEEVPAVVQMAWHESRTQEIRVSKKMNELRDDADCDNAIAPVRAIQQMEAYLLSGVAVLKSYMTTGARITATEILSLMSQVTFAAHTAEALSRWAGEAMETLGRERDRAHALHRENAQVSREATLAQKEIMSLEARIFHTRKELESAKAYAARIKAESGDMRAVFGAIDDSVTAAGLELVTHDASGEPLSATQAAFAMIKKLRETCISQQDHIGRLEFFVERGKLDLEQAEMTIKGMERASSSKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVSXXXXMTSSDL---QSAARAPSGGRYSGTRGGSPXXXXXXXXXXXXXAATFTSTDAGQSTATXXXX--AADSSRAGMRASPRAARAGAGADRDGTAVSVSASTTVDSYSXXXXXXXXXATDRVGGRGGRVGRRATNTETAVG 1817
F WHHKVTPSRRLKKHAQRGLLVERPIGETLTKAVGLVDASVAHQRRI+NLFSELE++ERT+EQMDNNGEEEVPAVVQMAWHESRTQEIRVSKKMNELRDDADCDNAIAPVRA QQ+EAYLLSGVAVLKSYMTTGARITATEILSLMSQVTFAAHTAEALSRWAGEAMETLGRERDRAHALHRENAQVSREATLAQKEIMSLEA+IFHTRKELESAKAYAARIKAESGDMR VFGAIDDSVTAAGLEL+THDASGEPLSATQAAF MIKKLRETCISQQDHIGRLEFFVERGKLDLEQAEMTIK M RASSSKRA XXXXXXXXXXXXXX XXXXXXXXXXXX + T+ + SAARA +G RYSGTR GSP AAT XXXX AADSSRAGM AS R ARAGAGADRDGTA+SVSAST VDSYS ATDRVGGR ATNTETAVG
Sbjct: 10 FVYRWHHKVTPSRRLKKHAQRGLLVERPIGETLTKAVGLVDASVAHQRRIKNLFSELESRERTLEQMDNNGEEEVPAVVQMAWHESRTQEIRVSKKMNELRDDADCDNAIAPVRATQQLEAYLLSGVAVLKSYMTTGARITATEILSLMSQVTFAAHTAEALSRWAGEAMETLGRERDRAHALHRENAQVSREATLAQKEIMSLEAKIFHTRKELESAKAYAARIKAESGDMRVVFGAIDDSVTAAGLELMTHDASGEPLSATQAAFGMIKKLRETCISQQDHIGRLEFFVERGKLDLEQAEMTIKDMGRASSSKRARXXXXXXXXXXXXXXRGAYGFSASSAGGGSXXXXXXXXXXXXPPSPTHGNKASAASIAVSTAVSMASSHSAARALNGDRYSGTRAGSPSSSSCNTPTNDDDAATVXXXXXXXXXXXXXXXXXAADSSRAGMHASLRTARAGAGADRDGTAISVSASTAVDSYSNNN------ATDRVGGRXXXXXXXATNTETAVG 516
BLAST of mRNA_E-fasciculatus_F_contig1486.3462.1 vs. uniprot
Match: D7G258_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G258_ECTSI) HSP 1 Score: 206 bits (523), Expect = 2.910e-56 Identity = 177/234 (75.64%), Postives = 186/234 (79.49%), Query Frame = 3
Query: 3957 MTTPPLGQQQRVPREGGRGXXXXXRQGHRRGVDNRDSPQRQEHEPTGGSGAKGGDWVVSGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SPAPAASVKDMQGRARLQHMPKTVGDVVLAVAGGGVDESPEMVVTGAVAAKAAVAERDAA---------EKXXXXXXXXXXXVEGGGTGEAAAGDEADGEEDRKRQRQQRALQAFLKGA 4628
MT PPLGQQQR PREGGRG QGHRR VD R+SPQRQE+E TGG GAKGGDWVVSGRE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +PAPAASVKD+QGRAR+QHMPKTVGDVVLAVAGGGVDESP+M VTGAVA AVAER A+ +K EGGGTGEA AGDE DGEEDRKR+RQQRALQAFLKGA
Sbjct: 1 MTAPPLGQQQRDPREGGRGGEMGQTQGHRRDVDGRNSPQRQENEQTGGCGAKGGDWVVSGREGGRHASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPAPAASVKDVQGRARIQHMPKTVGDVVLAVAGGGVDESPDMAVTGAVAGNPAVAERGASGKEARHSGDKKGADGVRRESEGAEGGGTGEAGAGDETDGEEDRKRKRQQRALQAFLKGA 234 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1486.3462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1486.3462.1 >prot_E-fasciculatus_F_contig1486.3462.1 ID=prot_E-fasciculatus_F_contig1486.3462.1|Name=mRNA_E-fasciculatus_F_contig1486.3462.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1809bp MPSTHFDVTPVTVATKFRRGLSSRNTEVLYGGGGPVAANTNGGPDNQDAVback to top mRNA from alignment at E-fasciculatus_F_contig1486:336..14609- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1486.3462.1 ID=mRNA_E-fasciculatus_F_contig1486.3462.1|Name=mRNA_E-fasciculatus_F_contig1486.3462.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=14274bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1486:336..14609- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1486:336..14609- >mRNA_E-fasciculatus_F_contig1486.3462.1 ID=mRNA_E-fasciculatus_F_contig1486.3462.1|Name=mRNA_E-fasciculatus_F_contig1486.3462.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=10854bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1486:336..14609- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |