prot_E-fasciculatus_F_contig14855.3458.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14855.3458.1
Unique Nameprot_E-fasciculatus_F_contig14855.3458.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length181
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14855.3458.1 vs. uniprot
Match: D7FNA1_ECTSI (PPR_long domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA1_ECTSI)

HSP 1 Score: 280 bits (715), Expect = 1.750e-88
Identity = 141/179 (78.77%), Postives = 148/179 (82.68%), Query Frame = 0 
Query:    1 LEALELFKRVRSLGAYPPPTLCSLLVQVLAAEGMLEEAEEQFADMLKYGMLPSESCATMVIRLRVQRGKLAEAMEVLAIMEGSEYQQKFHRPRFRSYQPVICELLRRGEMDGVMQLWKHMEWHSILPKESFLLDLIEGVANNRRASSRDSLTQLADHLLDGVSKTLIYPSAPTVKALVE 179
            LEALE FKR+RSLGAYPPPTLCSLLVQ+LAAEGMLEEAEEQFADMLKYGML                      MEVLA+MEG EYQ+KF RPRFRSYQPVICELLRRGEMDGVMQLWKHMEWHSI PKESFLLDLIEG+A N + SSRDSL QLADHLLDG+SKTLIYPSAPTVK LVE
Sbjct:  285 LEALEFFKRIRSLGAYPPPTLCSLLVQLLAAEGMLEEAEEQFADMLKYGMLXXXXXXXXXXXXXXXXXXXXXXMEVLAMMEGREYQKKFCRPRFRSYQPVICELLRRGEMDGVMQLWKHMEWHSIRPKESFLLDLIEGIAKNHQVSSRDSLAQLADHLLDGMSKTLIYPSAPTVKTLVE 463
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BLAST of mRNA_E-fasciculatus_F_contig14855.3458.1 vs. uniprot
Match: A0A6H5JYJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ8_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 3.660e-66
Identity = 103/114 (90.35%), Postives = 109/114 (95.61%), Query Frame = 0 
Query:   66 QRGKLAEAMEVLAIMEGSEYQQKFHRPRFRSYQPVICELLRRGEMDGVMQLWKHMEWHSILPKESFLLDLIEGVANNRRASSRDSLTQLADHLLDGVSKTLIYPSAPTVKALVE 179
            QRGKLAEAMEVLA+MEG EYQQKF RPRFRSYQPVICELLRRGEMDGVMQLW+HM+WHSI PKESFLLDLIEG+ANN  ASSR+SLTQLADHLLDG+SKTLIYPSAPTVKALVE
Sbjct:   10 QRGKLAEAMEVLAMMEGREYQQKFCRPRFRSYQPVICELLRRGEMDGVMQLWQHMKWHSIRPKESFLLDLIEGIANNHHASSRNSLTQLADHLLDGMSKTLIYPSAPTVKALVE 123
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14855.3458.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNA1_ECTSI1.750e-8878.77PPR_long domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JYJ8_9PHAE3.660e-6690.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..180
e-value: 5.6E-20
score: 73.9
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 33..142
e-value: 8.0E-12
score: 45.0
NoneNo IPR availablePANTHERPTHR13547UNCHARACTERIZEDcoord: 2..177
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1..17
score: 5.141
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 93..127
score: 7.41
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 53..87
score: 6.007
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 18..52
score: 9.164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14855contigE-fasciculatus_F_contig14855:544..3130 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14855.3458.1mRNA_E-fasciculatus_F_contig14855.3458.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14855 544..3130 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14855.3458.1 ID=prot_E-fasciculatus_F_contig14855.3458.1|Name=mRNA_E-fasciculatus_F_contig14855.3458.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=181bp
LEALELFKRVRSLGAYPPPTLCSLLVQVLAAEGMLEEAEEQFADMLKYGM
LPSESCATMVIRLRVQRGKLAEAMEVLAIMEGSEYQQKFHRPRFRSYQPV
ICELLRRGEMDGVMQLWKHMEWHSILPKESFLLDLIEGVANNRRASSRDS
LTQLADHLLDGVSKTLIYPSAPTVKALVEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR033443PPR_long
IPR011990TPR-like_helical_dom_sf